Recent Advances in Genome-Editing Technology with CRISPR/Cas9 Variants and Stimuli-Responsive Targeting Approaches within Tumor Cells: A Future Perspective of Cancer Management DOI Open Access
Khaled S. Allemailem, Saleh A. Almatroodi, Ahmad Almatroudi

et al.

International Journal of Molecular Sciences, Journal Year: 2023, Volume and Issue: 24(8), P. 7052 - 7052

Published: April 11, 2023

The innovative advances in transforming clustered regularly interspaced short palindromic repeats-associated protein 9 (CRISPR/Cas9) into different variants have taken the art of genome-editing specificity to new heights. Allosteric modulation Cas9-targeting by sgRNA sequence alterations and protospacer adjacent motif (PAM) modifications been a good lesson learn about activity scores Cas9 variants. Some high-fidelity ranked as Sniper-Cas9, eSpCas9 (1.1), SpCas9-HF1, HypaCas9, xCas9, evoCas9. However, selection an ideal variant for given target remains challenging task. A safe efficient delivery system CRISPR/Cas9 complex at tumor sites faces considerable challenges, nanotechnology-based stimuli-responsive approaches significantly contributed cancer management. Recent innovations nanoformulation design, such pH, glutathione (GSH), photo, thermal, magnetic responsive systems, modernized approaches. These nanoformulations possess enhanced cellular internalization, endosomal membrane disruption/bypass, controlled release. In this review, we aim elaborate on specific endonuclease system. Furthermore, critical constraints clinical translations towards management prospects are described.

Language: Английский

CRISPR-Cas guides the future of genetic engineering DOI Open Access
Gavin J. Knott, Jennifer A. Doudna

Science, Journal Year: 2018, Volume and Issue: 361(6405), P. 866 - 869

Published: Aug. 30, 2018

The diversity, modularity, and efficacy of CRISPR-Cas systems are driving a biotechnological revolution. RNA-guided Cas enzymes have been adopted as tools to manipulate the genomes cultured cells, animals, plants, accelerating pace fundamental research enabling clinical agricultural breakthroughs. We describe basic mechanisms that set toolkit apart from other programmable gene-editing technologies, highlighting diverse naturally evolved now functionalized biotechnologies. discuss rapidly evolving landscape applications, gene editing transcriptional regulation, imaging, diagnostics. Continuing functional dissection an expanding applications position at cutting edge nucleic acid manipulation is rewriting biology.

Language: Английский

Citations

1270

CRISPR technology: A decade of genome editing is only the beginning DOI
Joy Y. Wang, Jennifer A. Doudna

Science, Journal Year: 2023, Volume and Issue: 379(6629)

Published: Jan. 19, 2023

The advent of clustered regularly interspaced short palindromic repeat (CRISPR) genome editing, coupled with advances in computing and imaging capabilities, has initiated a new era which genetic diseases individual disease susceptibilities are both predictable actionable. Likewise, genes responsible for plant traits can be identified altered quickly, transforming the pace agricultural research breeding. In this Review, we discuss current state CRISPR-mediated manipulation human cells, animals, plants along relevant successes challenges present roadmap future technology.

Language: Английский

Citations

608

CRISPR Interference-Based Platform for Multimodal Genetic Screens in Human iPSC-Derived Neurons DOI Creative Commons
Ruilin Tian, Mariam A. Gachechiladze, Connor H. Ludwig

et al.

Neuron, Journal Year: 2019, Volume and Issue: 104(2), P. 239 - 255.e12

Published: Aug. 15, 2019

Highlights•A CRISPR interference platform for genetic screens in human iPSC-derived neurons•Survival uncover genes essential neurons, but not iPSCs or cancer cells•Single-cell RNA-seq reveal distinct neuronal roles ubiquitous genes•Arrayed high-content controlling morphologySummaryCRISPR/Cas9-based functional genomics have transformed our ability to elucidate mammalian cell biology. However, most previous CRISPR-based were conducted lines rather than healthy, differentiated cells. Here, we describe a (CRISPRi)-based neurons derived from induced pluripotent stem cells (iPSCs). We demonstrate robust and durable knockdown of endogenous such present results three complementary screens. First, survival-based screen revealed neuron-specific that improved survival upon knockdown. Second, with single-cell transcriptomic readout uncovered several examples whose had strikingly cell-type-specific consequences. Third, longitudinal imaging detected consequences gene on morphology. Our highlight the power unbiased types provide systematic interrogation normal disease states neurons.Video Abstract/cms/asset/c2672569-5397-4e97-a52a-74b50c33ac04/mmc10.mp4Loading ...Download video (mp4, 134 MB)Graphical abstract

Language: Английский

Citations

414

Synthetic lethality as an engine for cancer drug target discovery DOI
Alan Huang, Levi A. Garraway, Alan Ashworth

et al.

Nature Reviews Drug Discovery, Journal Year: 2019, Volume and Issue: 19(1), P. 23 - 38

Published: Nov. 11, 2019

Language: Английский

Citations

385

Synthetic lethal therapies for cancer: what’s next after PARP inhibitors? DOI
Alan Ashworth, Christopher J. Lord

Nature Reviews Clinical Oncology, Journal Year: 2018, Volume and Issue: 15(9), P. 564 - 576

Published: June 28, 2018

Language: Английский

Citations

368

CRISPR/Cas9 for cancer research and therapy DOI Creative Commons
Tianzuo Zhan, Niklas Rindtorff, Johannes Betge

et al.

Seminars in Cancer Biology, Journal Year: 2018, Volume and Issue: 55, P. 106 - 119

Published: April 16, 2018

CRISPR/Cas9 has become a powerful method for making changes to the genome of many organisms. First discovered in bacteria as part an adaptive immune system, and modified versions have found widespread use engineer genomes activate or repress expression genes. As such, promises accelerate cancer research by providing efficient technology dissect mechanisms tumorigenesis, identify targets drug development, possibly arm cells cell-based therapies. Here, we review current applications therapy. We describe novel Cas9 variants how they are used functional genomics discover cancer-specific vulnerabilities. Furthermore, highlight impact generating organoid mouse models cancer. Finally, provide overview first clinical trials that apply therapeutic approach against

Language: Английский

Citations

272

An efficient KRAB domain for CRISPRi applications in human cells DOI
Nader Alerasool, Dmitri Segal, Hunsang Lee

et al.

Nature Methods, Journal Year: 2020, Volume and Issue: 17(11), P. 1093 - 1096

Published: Oct. 5, 2020

Language: Английский

Citations

185

A new era in functional genomics screens DOI
Laralynne Przybyla, Luke A. Gilbert

Nature Reviews Genetics, Journal Year: 2021, Volume and Issue: 23(2), P. 89 - 103

Published: Sept. 20, 2021

Language: Английский

Citations

182

CRISPR/Cas: Advances, Limitations, and Applications for Precision Cancer Research DOI Creative Commons
Yue Yang, Jin Xu, Shuyu Ge

et al.

Frontiers in Medicine, Journal Year: 2021, Volume and Issue: 8

Published: March 3, 2021

Cancer is one of the most leading causes mortalities worldwide. It caused by accumulation genetic and epigenetic alterations in 2 types genes: tumor suppressor genes (TSGs) proto-oncogenes. In recent years, development clustered regularly interspaced short palindromic repeats (CRISPR) technology has revolutionized genome engineering for different cancer research ranging from fundamental science to translational medicine precise treatment. The CRISPR/CRISPR associated proteins (CRISPR/Cas) are prokaryote-derived editing systems that have enabled researchers detect, image, manipulate annotate specific DNA RNA sequences various living cells. CRISPR/Cas significant contributions discovery proto-oncogenes TSGs, cell epigenome normalization, targeted delivery, identification drug resistance mechanisms, high-throughput screening, models establishment, immunotherapy gene therapy clinics. Robust technical improvements shown a considerable degree efficacy, specificity, flexibility target locus desired applications. Recent developments CRISPRs offers hope medical cure against other deadly diseases. Despite this field, several challenges need be addressed, such as off-target activity, insufficient indel or low homology-directed repair (HDR) efficiency, vivo delivery Cas system components, immune responses. This study aims overview technological advancements, preclinical perspectives on clinical applications CRISPR along with their advantages limitations. Moreover, potential research, genetic, treatments discussed.

Language: Английский

Citations

117

CRISPRi screens in human iPSC-derived astrocytes elucidate regulators of distinct inflammatory reactive states DOI
Kun Leng, Indigo V.L. Rose, Hyosung Kim

et al.

Nature Neuroscience, Journal Year: 2022, Volume and Issue: 25(11), P. 1528 - 1542

Published: Oct. 27, 2022

Language: Английский

Citations

95