Diversity of biologically active secondary metabolites from endophytic and saprotrophic fungi of the ascomycete order Xylariales

Natural Product Reports, Год журнала: 2018, Номер 35(9), С. 992 - 1014

Опубликована: Янв. 1, 2018

The diversity of secondary metabolites in the fungal order Xylariales is reviewed with special emphasis on correlations between chemical and biodiversity as inferred from recent taxonomic phylogenetic studies.

Язык: Английский

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An online resource for marine fungi

Fungal Diversity, Год журнала: 2019, Номер 96(1), С. 347 - 433

Опубликована: Май 1, 2019

Язык: Английский

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Fungal diversity notes 1036–1150: taxonomic and phylogenetic contributions on genera and species of fungal taxa

Fungal Diversity, Год журнала: 2019, Номер 96(1), С. 1 - 242

Опубликована: Май 1, 2019

Язык: Английский

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Freshwater Sordariomycetes

Fungal Diversity, Год журнала: 2019, Номер 99(1), С. 451 - 660

Опубликована: Ноя. 1, 2019

Abstract Sordariomycetes is one of the largest classes Ascomycota that comprises a highly diverse range fungi mainly characterized by perithecial ascomata and inoperculate unitunicate asci. Freshwater play an important role in ecosystems some them have potential to produce bioactive compounds. This study documents reviews freshwater Sordariomycetes, which groups aquatic habitats. Based on evidence from DNA sequence data morphology, we introduce new order Distoseptisporales, two families, viz. Ceratosphaeriaceae Triadelphiaceae, three genera, Aquafiliformis , Dematiosporium Neospadicoides 47 species, Acrodictys fluminicola lignicola Aquapteridospora fusiformis Arthrinium aquaticum Ascosacculus Atractospora aquatica Barbatosphaeria Ceratosphaeria C. Chaetosphaeria Ch. catenulata guttulata submersa Codinaea yunnanensis Conioscypha Cordana Cosmospora Cylindrotrichum submersum Dictyochaeta cangshanensis D. ellipsoidea Distoseptispora appendiculata neorostrata obclavata Hypoxylon Lepteutypa Myrmecridium N. Ophioceras Peroneutypa Phaeoisaria filiformis Pseudostanjehughesia Rhodoveronaea Seiridium Sporidesmiella Sporidesmium lageniforme S. Tainosphaeria lunata T. Wongia combinations, 9 records, Chaetomium globosum cubensis myriocarpa abramovii Co. terrestris Cuspidatispora xiphiago hyalosperma Stachybotrys chartarum chlorohalonata . A comprehensive classification presented based updated literature. Phylogenetic inferences analyses combined LSU, SSU, RPB2 TEF1α dataset comprising species are provided. Detailed information including their habitats distribution, diversity, holotype, specimens collected

Язык: Английский

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101 Dothideomycetes genomes: A test case for predicting lifestyles and emergence of pathogens

Studies in Mycology, Год журнала: 2020, Номер 96, С. 141 - 153

Опубликована: Фев. 1, 2020

Dothideomycetes is the largest class of kingdom Fungi and comprises an incredible diversity lifestyles, many which have evolved multiple times. Plant pathogens represent a major ecological niche they are known to infect most food crops feedstocks for biomass biofuel production. Studying ecology evolution has significant implications our fundamental understanding fungal evolution, their adaptation stress host specificity, practical with regard effects climate change on food, feed, livestock elements agro-economy. In this study, we present first large-scale, whole-genome comparison 101 introducing 55 newly sequenced species. The availability data produced high-confidence phylogeny leading reclassification 25 organisms, provided clearer picture relationships among various families, indicated that pathogenicity times within class. We also identified gene family expansions contractions across linked niches providing insights into genome group. Using machine-learning methods classified fungi lifestyle classes >95 % accuracy small number families positively correlated these distinctions. This can become valuable tool genome-based prediction species lifestyle, especially rarely seen poorly studied

Язык: Английский

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A multigene phylogeny toward a new phylogenetic classification of Leotiomycetes

IMA Fungus, Год журнала: 2019, Номер 10(1)

Опубликована: Июнь 7, 2019

Fungi in the class Leotiomycetes are ecologically diverse, including mycorrhizas, endophytes of roots and leaves, plant pathogens, aquatic aero-aquatic hyphomycetes, mammalian saprobes. These fungi commonly detected cultures from diseased tissue environmental DNA extracts. The identification specimens such character-poor samples increasingly relies on sequencing. However, current classification is still largely based morphologically defined taxa, especially at higher taxonomic levels. Consequently, formal frequently poorly congruent with relationships suggested by sequencing studies. Previous class-wide phylogenies have been ribosomal markers, most published multi-gene studies being focussed particular genera or families. In this paper we collate data available representing both sexual asexual morphs across genetic breadth class, a focus generic type species, to present phylogeny up 15 concatenated genes 279 specimens. Included dataset that were extracted 72 genomes for 10 new released study. To test statistical support deepest branches phylogeny, an additional 3156 51 selected also presented. fill some gaps 15-gene further ITS gene tree, particularly targeting ex-type species. A small number novel taxa proposed: Marthamycetales ord. nov., Drepanopezizaceae Mniaeciaceae fams. nov. changes limited part because ad hoc nature taxon specimen selection, purely availability data. constitutes framework enabling future taxonomically targeted using deliberate selection. Such will ideally include designation epitypes species those which not able be original specimen, consideration morphological characters whenever genetically clades recognized as within classification.

Язык: Английский

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The numbers of fungi: is the descriptive curve flattening?

Fungal Diversity, Год журнала: 2020, Номер 103(1), С. 219 - 271

Опубликована: Июль 1, 2020

Язык: Английский

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Reviewing the world's edible mushroom species: A new evidence‐based classification system

Comprehensive Reviews in Food Science and Food Safety, Год журнала: 2021, Номер 20(2), С. 1982 - 2014

Опубликована: Фев. 18, 2021

Abstract Wild mushrooms are a vital source of income and nutrition for many poor communities value to recreational foragers. Literature relating the edibility mushroom species continues expand, driven by an increasing demand wild mushrooms, wider interest in foraging, study traditional foods. Although numerous case reports have been published on edible doubt confusion persist regarding which safe suitable consume. Case often differ, evidence supporting stated properties can be incomplete or ambiguous. The need greater clarity is further underlined increases mushroom‐related poisonings. We propose system categorizing assigning final status. Using this system, we reviewed 2,786 from 99 countries, accessing 9,783 reports, over 1,100 sources. identified 2,189 species, 2,006 consumed safely, 183 required some form pretreatment prior consumption were associated with allergic reactions some. 471 uncertain because missing consumption, 76 unconfirmed unresolved, differing opinions toxicity. This most comprehensive list available date, demonstrating huge number consumed. Our review highlights information clash present clear, unambiguous, consistent manner.

Язык: Английский

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Diversity, morphology and molecular phylogeny of Dothideomycetes on decaying wild seed pods and fruits

Mycosphere, Год журнала: 2019, Номер 10(1), С. 1 - 186

Опубликована: Янв. 1, 2019

Dothideomycetes is one of the largest and most diverse class ascomycetes.Its members are reported from many plant parts, but less has been wild seed pods fruits.Dothideomycetes can be seed-borne or colonize fruits when they fall to ground.We studied found on pods, mainly in Thailand (tropical), a lesser extent, China (temperate) UK (temperate).We describe eight new genera, 50 species, provide 38 host records propose seven combinations.The genera are: Amorocoelophoma (Amorosiaceae), Cylindroaseptospora (Didymosphaeriaceae), Discotubeufia (Tubeufiaceae), Leucaenicola (Bambusicolaceae), Neolindgomyces (Lindgomycetaceae), Pleohelicoon (Pleomonodictydaceae), Quercicola (Astrosphaeriellaceae) Xenoastrosphaeriella (Astrosphaeriellaceae).The species Acrocalymma pterocarpi,

Язык: Английский

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Microfungi associated with Clematis (Ranunculaceae) with an integrated approach to delimiting species boundaries

Fungal Diversity, Год журнала: 2020, Номер 102(1), С. 1 - 203

Опубликована: Май 1, 2020

Abstract The cosmopolitan plant genus Clematis contains many climbing species that can be found worldwide. occurs in the wild and is grown commercially for horticulture. Microfungi on were collected from Belgium, China, Italy, Thailand UK. They are characterized by morphology analyses of gene sequence data using an integrated concept to validate identifications. study revealed two new families, 12 genera, 50 species, 26 host records with one dimorphic character report, ten transferred other genera. families multigene phylogeny Longiostiolaceae Pseudomassarinaceae Pleosporales (Dothideomycetes). New genera Anthodidymella (Didymellaceae), Anthosulcatispora Parasulcatispora (Sulcatisporaceae), Fusiformispora (Amniculicolaceae), Longispora (Phaeosphaeriaceae), Neobyssosphaeria (Melanommataceae), Neoleptosporella ( Chaetosphaeriales , incertae sedis) Neostictis (Stictidaceae), Pseudohelminthosporium (Neomassarinaceae), Pseudomassarina (Pseudomassarinaceae), Sclerenchymomyces (Leptosphaeriaceae) Xenoplectosphaerella (Plectosphaerellaceae). newly described Alloleptosphaeria clematidis ranunculacearum subglobosa Aquadictyospora Brunneofusispora Chaetosphaeronema clematidicola C. Chromolaenicola Diaporthe clematidina Dictyocheirospora Distoseptispora Floricola Hermatomyces Leptospora Massariosphaeria Melomastia M. fulvicomae Neoroussoella N. nigricans, Neovaginatispora Parathyridaria clematidis, P. serratifoliae virginianae Periconia verrucose Phomatospora uniseriata Pleopunctum Pseudocapulatispora Pseudocoleophoma Pseudolophiostoma chiangraiense Ramusculicola Sarocladium Sigarispora S. montanae Sordaria Stemphylium Wojnowiciella Xenodidymella Xenomassariosphaeria clematidis. following fungi recorded first time: Angustimassarina rosarum Dendryphion europaeum Dermatiopleospora mariae ravennica D. rudis Dichotomopilus ramosissimum xishuangbannaensis Didymosphaeria rubi - ulmifolii Fitzroyomyces cyperacearum Fusarium celtidicola thailandica Memnoniella oblongispora Neodidymelliopsis longicolla Neoeutypella baoshanensis heveae Nigrograna chromolaenae obliqua Pestalotiopsis verruculosa Pseudoberkleasmium chiangmaiense Pseudoophiobolus rosae Pseudoroussoella elaeicola vesicarium Torula . combinations (≡ Didymella ), A. vitalbina brunnea Neobambusicola Fuscohypha kunmingensis Plectosphaerella Magnibotryascoma rubriostiolata Teichospora Pararoussoella mangrovei Roussoella Pseudoneoconiothyrium euonymi jonesii Neoleptosphaeria Pleospora rosae) caninae ). microfungi distributed several classes Ascomycota. based morphological examination specimens, coupled phylogenetic data. To best our knowledge, consolidated approach recommended validating species.

Язык: Английский

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