Let's get high: Cladogenesis in freshwater crabs (Decapoda: Potamonautidae: Potamonautes) supports the mountain gradient speciation hypothesis in the Cape Fold and Drakensberg Mountains, South Africa
Ecology and Evolution,
Год журнала:
2024,
Номер
14(3)
Опубликована: Март 1, 2024
Abstract
During
the
present
study,
evolutionary
relationship
within
a
clade
of
mountain
freshwater
crabs
(
Potamonautes
)
was
examined
using
mtDNA
sequence
data
for
species
from
Cape
Fold
Mountain
(CFM)
and
Great
Escarpment
(Drakensberg
range).
We
undertook
phylogenetic
analyses,
divergence
time
estimation,
an
ancestral
area
reconstruction
to
explore
period
cladogenesis
understand
biogeographic
history
in
this
high‐altitude
clade.
Furthermore,
we
applied
four
delimitation
methods
ASAP,
bPTP,
bGMYC,
STACEY
on
latter
Bayesian
analyses
retrieved
monophyletic
crab
comprised
two
major
sister
clades,
one
(clade
A)
Drakensberg
Mountains
B)
species.
Divergence
estimation
indicated
that
clades
underwent
Mio/Pliocene
cladogenesis.
Within
CFM
(A),
P.
amathole
(Amathola
Mountains)
parvispina
(Cederberg
Kouebokkeveld
were
parvicorpus
(Cape
Peninsula,
Jonkershoek,
Helderberg
tuerkayi
(Overberg
brincki
(Hottentots
Holland
Mountains).
(B),
observed
situ
diversification.
Specimens
southcentral
(Dargle
Forest,
Injasuti,
Karkloof,
Impendle)
represent
new
undescribed
lineage
sp.
nov.
1.
The
second
northern
Drakensberg,
representing
clarus
,
central
depressus
turn
baziya
Eastern
Province.
application
generally
overestimated
number
Province
is
most
likely
range
area.
Ecological
niche
modelling
representative
A
B
demonstrated
temperature
rainfall
abiotic
drivers
differentiated
clades.
Our
favours
gradient
speciation
hypothesis.
Язык: Английский
Perched on the Plateau: Speciation in a Cape Fold Mountain Velvet Worm Clade, With the Description of Seven New Species (Onychophora: Peripatopsidae: Peripatopsis) From South Africa
Ecology and Evolution,
Год журнала:
2025,
Номер
15(4)
Опубликована: Апрель 1, 2025
ABSTRACT
During
the
present
study,
we
re‐examined
species
boundaries
in
three
mountain‐dwelling
velvet
worm
complexes
(
Peripatopsis
balfouri
s.l.,
P.
bolandi
s.l.
and
purpureus
s.l
.)
along
Cape
Fold
Mountains
of
South
Africa.
We
obtained
DNA
sequence
data
for
both
mitochondrial
cytochrome
c
oxidase
subunit
one
COI
)
nuclear
18S
rRNA
loci.
Phylogenetic
inferences
were
derived
with
use
maximum
likelihood
Bayesian
inference
coupled
a
divergence
time
estimation.
Four
delimitation
methods
(ASAP,
bPTP,
bGYMC
STACEY)
together
gross
morphological
analyses
scanning
electron
microscopy
(SEM)
used
to
validate
diagnosis
novel
species.
Combined
phylogenetic
results
demonstrated
presence
geographically
discrete
clades
(A‐C).
Corroborative
evidence
lineages
could
be
from
dorsal
integument
colour
live
specimens
fixed
ventral
papilla
scales
rank
counts.
The
four
produced
variable
results.
Divergence
estimations
indicated
that
Miocene
epochs
was
major
period
cladogenesis.
seven
species,
barnardi
sp.
nov
.,
fernkloofi
jonkershoeki
kogelbergi
landroskoppie
limietbergi
palmeri
are
herein
described.
Язык: Английский
Hiding in the hills: evidence for two novel mountain-dwelling freshwater crabs of Potamonautes (Decapoda: Brachyura: Potamonautidae) from South Africa
Journal of Crustacean Biology,
Год журнала:
2024,
Номер
44(2)
Опубликована: Июнь 1, 2024
Abstract
Specimens
of
freshwater
crabs
(PotamonautesMacLeay,
1838)
collected
from
mountainous
regions
in
the
Limpopo
and
Mpumalanga
provinces
South
Africa
could
not
be
assigned
to
species
level
possibly
represented
novel
lineages.
The
phylogenetic
placement
these
two
potential
lineages
were
investigated
with
use
DNA
sequence
data
three
mitochondrial
loci
(cytochrome
oxidase
c
subunit
one
-
COI,
12S
rRNA,
16S
rRNA)
nuclear
locus
(histone
3
(H3)),
using
a
maximum
likelihood
Bayesian
Inference
approach
incorporating
all
Potamonautes
described
southern
Africa.
In
addition,
divergence
time
estimation
was
undertaken
on
tree
topology
determine
timing
cladogenesis.
Morphometric
analyses
also
conducted
undescribed
co-distributed,
phylogenetically
closely-related
(P.
flavusjoDaniels,
Phiri
&
Bayliss,
2014
P.
mariepskoppieDaniels,
Barnes,
Marais
Gouws,
2021)
discriminant
function
carapace
pereiopod
variables.
Phylogenetic
results
revealed
that
are
sister
groups
related
clade
endemic
subtropical
present
north-eastern
Africa,
while
indicates
Mio/Pliocene
morphometric
corroborate
distinction
between
co-distributed
species.
wolkbergin.
sp.
aurantiusn.
compared
other
congeneric
African
taxa.
Язык: Английский
Generalist species exhibit more genetic structure in comparison to a habitat specialist: Evidence from a phylogeographic study of two freshwater crabs (Decapoda: Potamonautidae: Potamonautes), implications for habitat conservation
Ecology and Evolution,
Год журнала:
2024,
Номер
14(9)
Опубликована: Сен. 1, 2024
During
the
present
study,
phylogeography
of
wetland
specialist,
freshwater
crab,
Язык: Английский
Plio/Pleistocene-induced climatic oscillations drive cladogenesis in a high-altitude freshwater crab, Potamonautes mariepskoppie (Decapoda: Potamonautidae), in South Africa
Biological Journal of the Linnean Society,
Год журнала:
2024,
Номер
143(3)
Опубликована: Окт. 10, 2024
Abstract
In
this
study,
we
explored
the
phylogeographical
history
of
mountain-dwelling
freshwater
crab
Potamonautes
mariepskoppie
to
understand
evolutionary
processes
and
identify
possible
hidden
lineages.
DNA
sequence
data
from
mitochondrial
loci
(COI,
12S
rRNA,
16S
rRNA)
a
nuclear
locus
(histone
3)
were
analysed
using
both
maximum
likelihood
Bayesian
inference.
Species
delimitation
was
tested
with
four
methods:
ASAP,
bPTP,
bGMYC,
STACEY.
Divergence
time
estimation
ecological
niche
modelling
ENMEval
Maxent
used
study
species
distribution
elucidate
abiotic
factors
affecting
evolution.
Phylogenetic
analyses
showed
three
distinct
clades,
corresponding
geographical
regions:
Limpopo,
Mpumalanga,
Mount
Sheba.
These
clades
had
no
shared
haplotypes
exhibited
moderate
genetic
differentiation.
estimates
indicated
that
these
diverged
during
Plio/Pleistocene,
period
significant
climatic
shifts
in
southern
Africa.
All
methods
consistently
supported
recognition
as
species;
however,
discriminant
function
carapace
characteristics
overlap
between
clades.
Ecological
rainfall
is
key
factor
distribution.
The
present
highlights
need
for
further
investigation
high-elevation
plateaus
throughout
Limpopo
because
fine-scale
sampling
might
unmask
considerable
hitherto-undocumented
biodiversity.
Язык: Английский
Impact of Pleistocene Climate on Diversification and Distribution of Congeneric Freshwater Crustacean Species
Journal of Biogeography,
Год журнала:
2024,
Номер
unknown
Опубликована: Дек. 5, 2024
ABSTRACT
Aim
The
climatic
oscillations
of
the
glacial–interglacial
cycles
significantly
influenced
species
diversification,
playing
an
essential
role
in
shaping
current
patterns
biodiversity.
However,
effects
Pleistocene
climate
on
diversification
and
their
distribution
are
poorly
understood
for
Southern
Hemisphere
some
taxonomic
groups,
such
as
invertebrates.
Here,
we
explore
changes
four
South
American
freshwater
crustaceans.
Location
America.
Taxon
Genus
Aegla
(Aeglidae).
Methods
We
performed
phylogenetic
analyses,
estimated
genetic
diversity
neutrality
indices
alacalufi
,
neuquensis
platensis
uruguayana
using
nuclear
mitochondrial
sequences.
used
genes
to
estimate
divergence
times,
calculate
historical
demography
reconstruct
ancestral
area
range.
also
past
potential
distributions
ecological
niche
modelling.
Results
Although
all
studied
had
by
glacial
cycles,
Patagonian
A.
which
were
directly
ice
cap,
appear
have
benefited
from
lower
sea
levels
melting
glaciation
ice.
As
was
affected
dry
cold
continent
during
period.
Main
Conclusions
Our
study
unveils
intricate
interplay
between
fluctuations
evolutionary
history
crustaceans
Distinct
phylogeographic
observed
.
Some
underwent
significant
due
glaciation,
while
cold,
arid
conditions
shaped
others.
These
findings
underscore
crucial
dynamics
species.
ecosystems
confront
escalating
threats,
our
highlights
urgency
conservation
measures
continued
research
unveil
species'
adaptive
mechanisms
face
change.
Язык: Английский