Biodiversity Data Journal,
Год журнала:
2024,
Номер
12
Опубликована: Апрель 29, 2024
Declines
in
biodiversity
and
ecosystem
health
due
to
climate
change
are
raising
urgent
concerns.
In
response,
large-scale
multispecies
monitoring
programmes
being
implemented
that
increasingly
adopt
sensor-based
approaches
such
as
acoustic
recording.
These
rely
heavily
on
ecological
data
science.
However,
developing
reliable
algorithms
for
processing
relies
labelled
datasets
of
sufficient
quality
quantity.
We
present
a
dataset
1,575
dawn
chorus
soundscape
recordings,
141
fully
annotated
(n
=
32,994
annotations)
with
avian,
mammalian
amphibian
vocalisations.
The
remaining
recordings
were
included
facilitate
novel
research
applications.
paired
48
site-level
climatic,
forest
structure
topographic
covariates.
This
provides
valuable
resource
researchers
classification
or
studying
wildlife
behaviour
its
relationship
environmental
gradients.
collected
part
long-term
Northern
Spotted
Owl
program;
this
demonstrates
the
complementary
value
harnessing
existing
efforts
strengthen
sampling.
Ecological Indicators,
Год журнала:
2023,
Номер
154, С. 110851 - 110851
Опубликована: Авг. 27, 2023
Monitoring
population
size
at
ecosystem
scales
is
difficult
for
most
species
of
conservation
concern.
While
assessing
site
occupancy
broad
has
proven
feasible,
rigorous
tracking
changes
in
over
time
not
–
even
though
it
can
provide
a
stronger
basis
status
and
conservation-decision
making.
Therefore,
we
demonstrate
how
relatively
low-intensity,
ecosystem-scale
passive
acoustic
monitoring
(PAM)
be
linked
to
local-density
estimate
the
native
California
spotted
owls
(Strix
occidentalis
occidentalis)
invasive
barred
(S.
varia)
across
western
Sierra
Nevada,
California.
Based
on
PAM
sampling
grid
with
400
ha
cells
(the
approximate
home
range
these
species),
estimated
between
0.42
(SE
=
0.02)
0.30
using
liberal
strict
criteria,
respectively,
considering
cell
occupied.
PAM-based
estimates
within
local-scale
density
study
areas
(range
0.41–0.78
0.28–0.76
respectively)
were
strongly
positively
correlated
local
0.08–0.31
owl/km2)
this
species.
In
contrast,
ecosystem-wide
was
very
low
based
(0.034,
SE
<
0.01),
as
densities
studies
0–0.005
owls/km2).
By
scaling
studies,
that,
depending
2,218
278)
or
2,328
489)
occurred
Nevada
2021.
Thus,
while
are
rare
subspecies,
they
well-distributed
Nevada.
Because
there
so
few
owl
detections,
could
abundance,
which
reflects
success
prior
experimental
removals
region.
conclusion,
our
provides
generalizable
framework
estimating
territorial
when
available.
that
approach
novel
valuable
insights
into
populations
aid
conservation.
American Journal of Primatology,
Год журнала:
2024,
Номер
86(4)
Опубликована: Янв. 20, 2024
The
urgent
need
for
effective
wildlife
monitoring
solutions
in
the
face
of
global
biodiversity
loss
has
resulted
emergence
conservation
technologies
such
as
passive
acoustic
(PAM).
While
PAM
been
extensively
used
marine
mammals,
birds,
and
bats,
its
application
to
primates
is
limited.
Black-and-white
ruffed
lemurs
(Varecia
variegata)
are
a
promising
species
test
with
due
their
distinctive
loud
roar-shrieks.
Furthermore,
these
challenging
monitor
via
traditional
methods
fragmented
often
unpredictable
distribution
Madagascar's
dense
eastern
rainforests.
Our
goal
this
study
was
develop
machine
learning
pipeline
automated
call
detection
from
data,
compare
effectiveness
versus
in-person
observations,
investigate
diel
patterns
lemur
vocal
behavior.
We
did
at
Mangevo,
Ranomafana
National
Park
by
concurrently
conducting
focal
follows
deploying
autonomous
recorders
May-July
2019.
transfer
build
convolutional
neural
network
(optimized
recall)
that
calls
(57-h
runtime;
recall
=
0.94,
F1
0.70).
found
outperformed
saving
time,
money,
labor
while
also
providing
re-analyzable
data.
Using
yielded
novel
insights
into
V.
variegata
patterns;
we
present
first
published
evidence
nocturnal
calling.
developed
graphic
user
interface
open-sourced
data
code,
serve
resource
primatologists
interested
implementing
learning.
By
leveraging
potential
pipeline,
can
address
primate
population
surveys
inform
strategies.
Ecological Indicators,
Год журнала:
2024,
Номер
162, С. 112016 - 112016
Опубликована: Апрель 13, 2024
Population
monitoring
is
an
essential
component
of
biodiversity
conservation
and
management,
but
low
detection
probabilities
for
rare
and/or
cryptic
species
makes
estimating
abundance
occupancy
challenging.
Passive
acoustic
combined
with
machine
learning
algorithms
represents
a
potential
path
forward
to
effectively
efficiently
monitor
the
occurrence
vocalizing
across
entire
forest
landscapes.
Our
objectives
were
develop
implement
convolutional
neural
network
(PNW-Cnet)
identify
vocalizations
threatened
nesting
bird
–
marbled
murrelet
(Brachyramphus
marmoratus)
in
Pacific
Northwest,
U.S.A.,
2018–2021.
We
used
PNW-Cnet
predictions
from
broadscale
passive
data
examine
spatiotemporal
patterns
distribution
murrelets.
showed
sufficiently
high
prediction
accuracy
(overall
precision
>
0.9)
enable
population
monitoring.
Spatiotemporal
analysis
that
annual
peak
call
occurs
ordinal
weeks
28–32
(late
July–Mid
August)
this
varied
by
study
area.
The
greatest
number
detections
typically
occurred
Olympic
Peninsula
Oregon
Coast
Range
where
late-successional
dominates
nearer
ocean
habitats.
demonstrate
can
be
understand
intensity
use
broad
scales
addition
typical
detection/non-detection
are
often
collected.
offers
considerable
promise
modeling
long-term
species.
The
emergence
of
continental
to
global
scale
biodiversity
data
has
led
growing
understanding
patterns
in
species
distributions,
and
the
determinants
these
at
large
spatial
scales.
However,
identifying
specific
mechanisms,
including
demographic
processes,
determining
distributions
remains
difficult,
as
large‐scale
are
typically
restricted
observations
only
presence.
New
remote
automated
approaches
for
collecting
data,
such
recording
units
(ARUs),
provide
a
promising
avenue
towards
direct
measurement
reproduction,
that
cannot
feasibly
be
measured
by
traditional
survey
methods.
In
this
study,
we
analyze
collected
ARUs
from
452
points
across
an
approximately
1500
km
long
study
region
compare
adult
juvenile
great
horned
owl
Bubo
virginianus
.
We
specifically
examine
whether
habitat
associated
with
successful
reproduction
is
same
postulated
congruence
between
two
would
suggest
all
areas
species'
range
contribute
equally
maintenance
population,
whereas
significant
differences
more
specificity
requirements
reproduction.
filtered
calls
manual
review
using
classification
constructed
single
season
occupancy
models
land
cover
vegetation
covariates
which
significantly
predicted
presence
each
life
stage.
found
use
adults
was
increasing
amounts
forest
cover,
reduced
basal
area,
lower
elevations;
decreasing
pattern
opposite
adults.
These
results
show
owls
not
sufficient
proxy
locations
occurs,
also
demonstrate
highly
scalable
workflow
could
used
similar
analyses
other
sound‐producing
species.
Ornithological Applications,
Год журнала:
2023,
Номер
125(3)
Опубликована: Май 25, 2023
Abstract
Barred
Owls
(Strix
varia)
have
recently
expanded
westward
from
eastern
North
America,
contributing
to
substantial
declines
in
Northern
Spotted
occidentalis
caurina).
Passive
acoustic
monitoring
(PAM)
represents
a
potentially
powerful
approach
for
tracking
range
expansions
like
the
Owl’s,
but
further
methods
development
is
needed
ensure
that
PAM-informed
occupancy
models
meaningfully
reflect
population
processes.
Focusing
on
leading
edge
of
Owl
expansion
coastal
California,
we
used
combination
PAM
data,
GPS-tagging,
and
active
surveys
(1)
estimate
breeding
home
size,
(2)
identify
patterns
vocal
activity
resident
occupancy,
(3)
rates.
Mean
season
size
(452
ha)
was
reasonably
consistent
with
cells
(400
sampled
autonomous
recording
units
(ARUs).
Nevertheless,
false-positive
detections
frequently
occurred
within
not
containing
an
center
such
site
estimates
derived
using
all
detected
vocalizations
(0.61)
were
unlikely
be
representative
occupancy.
However,
proportion
survey
nights
confirmed
(VN)
number
ARUs
sampling
cell
(VU)
indicative
residency.
Moreover,
false
positive
error
rate
could
reduced
analyses
by
establishing
thresholds
VN
VU
define
detections,
although
doing
so
increased
negative
rates
some
cases.
Using
different
VU,
estimated
0.29–0.44,
which
indicates
become
established
region
also
timely
lethal
removals
still
help
prevent
extirpation
Owls.
Our
findings
provide
scalable
framework
populations
throughout
their
and,
more
broadly,
basis
converting
programs.
SoftwareX,
Год журнала:
2023,
Номер
23, С. 101473 - 101473
Опубликована: Июль 1, 2023
We
present
PNW-Cnet
v4,
a
deep
neural
net
with
an
associated
Shiny-based
application
designed
to
facilitate
efficient
data
processing
detect
terrestrial
wildlife
species
through
passive
acoustic
monitoring.
v4
is
convolutional
network
that
detects
audio
signatures
of
37
focal
birds
and
mammals
inhabit
forests
the
Pacific
Northwest,
USA,
along
other
commonly
occurring
forest
sounds.
The
primary
objective
developing
was
support
long-term
northern
spotted
owl
(Strix
occidentalis
caurina)
monitoring
program.
By
incorporating
additional
classes,
expands
applicability
program
broadscale
biodiversity
research
Using
Shiny
app
users
can
process
using
graphical
user
interface,
summarize
apparent
detections
visually,
export
results
in
tabular
format.
Anthropogenic
noise
is
an
inevitable
by-product
of
human
activities.
However,
the
potential
effects
on
terrestrial
Antarctica’s
ecosystems
have
been
understudied.
Documented
impacts
encompass
stress,
alterations
in
behavioural
patterns,
auditory
masking,
and,
severe
instances,
mortality.
This
Perspective
note
aims
to
call
attention
human-generated
as
sources
impact
Antarctic
wildlife
and
highlight
soundscape
analysis
a
flexible,
cost-effective
tool
for
environmental
monitoring
across
Antarctica,
complementing
other
non-invasive
approaches.
Acoustic
environments
has
extensively
used
different
parts
world
assess
biodiversity,
monitor
populations’
status
trends,
identify
anthropogenic
disturbance.
Technological
advances
passive
acoustic
allow
gathering
detailed
information
with
little
need
attention,
powerful
processing
tools
algorithms
enable
researchers
analyse
large
collections
audio
data.
Cold
climates
limit
battery-operated
instruments,
but
solar
panels
summer
trials
revealed
over
100
days
unattended
operation,
which
promising
incorporation
management
toolbox.
Anthropogenic
noise
is
an
inevitable
by-product
of
human
activities.
However,
the
potential
effects
on
terrestrial
Antarctica's
ecosystems
have
been
understudied.
Documented
impacts
encompass
stress,
alterations
in
behavioural
patterns,
auditory
masking,
and,
severe
instances,
mortality.
This
Perspective
note
aims
to
call
attention
human-generated
as
sources
impact
Antarctic
wildlife
and
highlight
soundscape
analysis
a
flexible,
cost-effective
tool
for
environmental
monitoring
across
Antarctica,
complementing
other
non-invasive
approaches.
Acoustic
environments
has
extensively
used
different
parts
world
assess
biodiversity,
monitor
populations'
status
trends,
identify
anthropogenic
disturbance.
Technological
advances
passive
acoustic
allow
gathering
detailed
information
with
little
need
attention,
powerful
processing
tools
algorithms
enable
researchers
analyse
large
collections
audio
data.
Cold
climates
limit
battery-operated
instruments,
but
solar
panels
summer
trials
revealed
over
100
days
unattended
operation,
which
promising
incorporation
management
toolbox.
Journal of Wildlife Management,
Год журнала:
2023,
Номер
88(2)
Опубликована: Дек. 18, 2023
Abstract
The
California
spotted
owl
(
Strix
occidentalis
)
is
an
older‐forest
associated
species
that
resides
at
the
center
of
forest
management
planning
in
Sierra
Nevada
and
Southern
California,
USA,
which
are
experiencing
increasingly
large
severe
wildfires
drought‐related
tree
mortality.
We
leveraged
advances
passive
acoustic
survey
technologies
to
develop
acoustically
assisted
design
could
increase
efficiency
effectiveness
project‐level
surveys
for
owls,
allowing
be
completed
a
single
year
instead
multiple
years.
deployed
array
autonomous
recording
units
(ARUs)
across
landscape
identified
vocalizations
resulting
audio
using
BirdNET.
then
evaluated
spatio‐temporal
patterns
near
occupied
territories
ability
crew
naïve
location
locate
owls
based
on
detections.
After
only
3
weeks
surveys,
≥1
ARU
within
750
m
all
17
obtained
detections
≥2
nights.
When
active
broadcast
calling
were
conducted
ARUs
with
by
surveyors
territory
occupancy
status
locations,
located
93%
100%
≤3
surveys.
To
further
improve
we
developed
statistical
model
identify
prioritize
areas
different
methods
(active
only,
assisted,
no
surveys)
expected
probability
predicted
from
remotely
sensed
measurements
height
historical
occupancy.
Depending
managers'
tolerance
false
negatives,
this
help
might
not
benefit
low
probabilities
where
enhance
efficiency.
Collectively,
these
findings
can
managers
streamline
process
thus
pace
restoration
while
minimizing
potential
near‐term
adverse
effects
owls.