bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2022,
Номер
unknown
Опубликована: Май 1, 2022
Abstract
Background
Vascular
smooth
muscle
cells
(VSMCs)
plasticity
is
a
central
mechanism
in
cardiovascular
health
and
disease.
We
aimed
at
providing
deep
cellular
phenotyping,
epigenomic
proteomic
depiction
of
SMCs
derived
from
induced
pluripotent
stem
(iPSCs)
evaluating
their
potential
as
models
the
context
complex
genetic
arterial
diseases.
Methods
differentiated
3
human
iPSC
lines
using
either
RepSox
(R-SMCs)
or
PDGF-BB
TGF-β
(TP-SMCs),
during
second
half
24-days-long
protocol.
In
addition
to
assays,
we
performed
RNA-Seq
assay
for
transposase
accessible
chromatin
(ATAC)-Seq
6
time-points
differentiation.
The
extracellular
matrix
content
(matrisome)
generated
by
iPSCs
was
analyzed
mass
spectrometry.
Results
Both
differentiation
protocols
with
positive
expression
SMC
markers.
TP-SMCs
exhibited
greater
capacity
proliferation,
migration
lower
calcium
release
response
contractile
stimuli
compared
R-SMCs.
data
showed
that
genes
involved
function
arteries
were
highly
expressed
R-SMCs
primary
SMCs.
Matrisome
analyses
supported
an
overexpression
proteins
wound
repair
higher
secretion
basal
membrane
constituents
Open
regions
significantly
enriched
variants
associated
coronary
artery
disease
blood
pressure,
while
only
peripheral
Conclusions
Our
study
portrayed
two
presenting
complementary
phenotypes
high
relevance
plasticity.
combination
genome-editing
tools,
our
supports
use
these
regulatory
mechanisms
risk
loci
several
Graphical
AJP Lung Cellular and Molecular Physiology,
Год журнала:
2022,
Номер
324(2), С. L123 - L140
Опубликована: Дек. 20, 2022
Hyperoxia
disrupts
lung
development
in
mice
and
causes
bronchopulmonary
dysplasia
(BPD)
neonates.
To
investigate
sex-dependent
molecular
cellular
programming
involved
hyperoxia,
we
surveyed
the
mouse
using
single
cell
RNA
sequencing
(scRNA-seq),
validated
our
findings
human
neonatal
cells
vitro.
Hyperoxia-induced
inflammation
alveolar
type
(AT)
2
gave
rise
to
damage-associated
transient
progenitors
(DATPs).
It
also
induced
a
new
subpopulation
of
AT1
with
reduced
expression
growth
factors
normally
secreted
by
cells,
but
increased
mitochondrial
gene
expression.
Female
epithelial
had
less
EMT
pulmonary
fibrosis
signaling
hyperoxia.
In
endothelium,
expansion
Car4+
EC
(Cap2)
was
seen
hyperoxia
along
an
emergent
Cap2
repressed
VEGF
signaling.
This
regenerative
response
females
exposed
Mesenchymal
inflammatory
signatures
distal
interstitial
fibroblast
subcluster
characterized
lipid
biosynthesis
transcriptomic
signature
resembling
myofibroblasts.
fibroblasts
vitro
resembled
scRNA-seq
data.
These
suggest
that
exposure
programs
distinct
sex-specific
stem
progenitor
reparative
responses
underpin
remodeling
BPD.
Hypertension,
Год журнала:
2023,
Номер
80(4), С. 740 - 753
Опубликована: Янв. 19, 2023
Vascular
smooth
muscle
cells
(SMCs)
plasticity
is
a
central
mechanism
in
cardiovascular
health
and
disease.
We
aimed
at
providing
cellular
phenotyping,
epigenomic
proteomic
depiction
of
SMCs
derived
from
induced
pluripotent
stem
evaluating
their
potential
as
models
the
context
complex
diseases.Human
cell
lines
were
differentiated
using
RepSox
(R-SMCs)
or
PDGF-BB
(platelet-derived
growth
factor-BB)
TGF-β
(transforming
factor
beta;
TP-SMCs),
during
24-day
long
protocol.
RNA-Seq
assay
for
transposase
accessible
chromatin-Seq
performed
6
time
points
differentiation,
mass
spectrometry
was
used
to
quantify
proteins.Both
differentiation
protocols
generated
with
positive
expression
SMC
markers.
TP-SMCs
exhibited
greater
proliferation
capacity,
migration
lower
calcium
release
response
contractile
stimuli,
compared
R-SMCs.
Genes
involved
function
arteries
highly
expressed
R-SMCs
primary
SMCs.
coronary
artery
transcriptomic
profiles
similar,
characterized
by
high
genes
blood
pressure
regulation
identified
FOXF1
HAND1
key
drivers
specific
program.
Extracellular
matrix
content
contained
more
proteins
wound
repair
higher
secretion
basal
membrane
constituents
Open
chromatin
regions
significantly
enriched
variants
associated
disease.Both
cell-derived
present
complementary
phenotypes
relevance
plasticity.
These
study
functional
genetic
risk
loci
main
arterial
diseases.
International Journal of Experimental Pathology,
Год журнала:
2023,
Номер
104(4), С. 188 - 198
Опубликована: Апрель 17, 2023
Abstract
Liver
fibrosis
is
caused
by
chronic
liver
injury.
There
are
limited
treatments
for
it,
and
the
pathogenesis
unclear.
Therefore,
there
an
urgent
need
to
explore
of
fibrosis,
try
identify
new
potential
therapeutic
targets.
For
this
study
we
used
carbon
tetrachloride
abdominal
injection
induced
animal
model
in
mice.
Primary
hepatic
stellate
cell
isolation
was
performed
a
density‐gradient
separation
method,
followed
immunofluorescence
stain
analyses.
Signal
pathway
analysis
dual‐luciferase
reporter
assay
western
blotting.
Our
results
showed
that
RUNX1
upregulated
cirrhotic
tissues
compared
with
normal
tissues.
Besides,
overexpression
more
severe
lesions
than
control
group
under
CCl
4
‐induced
conditions.
Moreover,
α‐SMA
expression
significantly
higher
group.
Interestingly,
found
could
promote
activation
TGF‐β/Smads
assay.
Thus
demonstrated
be
considered
as
regulator
activating
signalling.
Based
on
this,
concluded
may
developed
target
treatment
future.
In
addition,
also
provides
insight
about
aetiology
fibrosis.
JACC Basic to Translational Science,
Год журнала:
2024,
Номер
9(6), С. 754 - 770
Опубликована: Июнь 1, 2024
Cardiac
fibrosis
can
be
mitigated
by
limiting
fibroblast-to-myofibroblast
differentiation
and
proliferation.
Human
antigen
R
(HuR)
modulates
messenger
RNA
stability
expression
of
multiple
genes.
However,
the
direct
role
cardiac
myofibroblast
HuR
is
unknown.
Myofibroblast-specific
deletion
limited
preserved
functions
in
pressure
overload
injury.
Knockdown
transforming
growth
factor-β1–treated
fibroblasts
suppressed
abrogated
cyclins
D1
A2,
suggesting
a
potential
mechanism
which
promotes
Overall,
these
data
suggest
that
inhibition
could
therapeutic
approach
to
limit
fibrosis.
Frontiers in Immunology,
Год журнала:
2022,
Номер
13
Опубликована: Сен. 2, 2022
Limited
immunotherapeutic
effect
in
high-grade
serous
ovarian
carcinoma
(HGSOC)
propels
exploration
of
the
mechanics
behind
this
resistance,
which
may
be
partly
elucidated
by
investigating
characters
cancer-associated
fibroblasts
(CAFs),
a
significant
population
HGSOC
involved
shaping
tumor
immune
microenvironment.
Herein,
leveraging
gene
expression
data
samples
from
The
Cancer
Genome
Atlas
and
Gene
Expression
Omnibus
datasets,
we
suggested
that
CAFs
detrimentally
affected
outcomes
patients.
Subsequently,
performed
weighted
co-expression
network
analysis
(WGCNA)
to
identify
CAFs-related
module
screened
out
seven
hub
genes
module,
all
were
positively
correlated
with
infiltration
immunosuppressive
macrophages.
As
one
genes,
fibrillin
1
(FBN1)
its
relevance
CD206
further
verified
immunohistochemistry
staining
samples.
Meanwhile,
extracted
well
CAF
signatures
construct
CAFscore.
capacity
CAFscore
as
an
independent
prognostic
factor
was
validated
Cox
regression
analyses,
components
signals
microenvironment
also
investigated.
Under
evaluation
CAFscore,
patients
relatively
high
had
worse
outcomes,
activated
mesenchymal
signaling
pathways,
checkpoint
blockade
(ICB)
resistance
signatures,
consistent
fact
non-responders
anti-PD-1
treatment
cohorts
tended
have
higher
Besides,
possibility
guide
selection
sensitive
chemotherapeutic
agents
explored.
In
conclusion,
individualized
assessment
could
uncover
extent
stroma
activation
immunosuppression
inform
therapeutic
strategies
improve
benefit
therapies.
European Journal of Pharmacology,
Год журнала:
2023,
Номер
957, С. 176000 - 176000
Опубликована: Авг. 19, 2023
To
evaluate
the
inhibitory
effect
of
vitamin
D3
analogue
calcipotriol
(Cal)
on
fibrosis
pancreatic
stellate
cells
(PSCs)
induced
by
TGF-β1
and
rationality
Cal
use
in
alcoholic
chronic
pancreatitis
(ACP).
Double-labeling
immunofluorescence
was
used
for
identification
VDR+PSCs
pancreas
healthy
controls
(HC)
ACP
patients.
Van
Gieson
staining
examination
collagen
fibers.
RT-qPCR
Western
Blot
determining
mRNAs
proteins
VDR,
COL1A1
or
vitro
PSCs.
ELISA
LC-MS/MS
detection
serum
25(OH)D3.
The
PSC
line
(RP-2
cell)
determination
proteomic
alterations
plus
versus
to
examine
VDR
gene
knockdown.
Enhanced
expression
detected
RP-2
stimulated
with
alcohol
(ALC)
alone
PSCs
HC.
increased
were
positively
correlated
levels
areas
deposition
ACP.
overexpressed
ALC-treated
while
25(OH)D3
level
significantly
decreased
Through
a
VDR-dependent
mechanism,
antagonized
16
profibrotic
TGF-β1-induced
that
included
7
extracellular
matrix
components,
2
cytoskeletal
proteins,
fibrosis-associated
factors
(RUNX1
TRAF2),
TIMP-1,
CCN1,
integrin
α11,
an
adhesion
scaffold
protein
(TGFB1i1)
enzyme
mediating
fibrogenesis
(ENPP1).
This
study
suggests
administration
may
be
potential
antifibrotic
strategy
via
inhibiting
TGF-β1-mediated
action
during
development
Biomedicines,
Год журнала:
2023,
Номер
11(9), С. 2357 - 2357
Опубликована: Авг. 23, 2023
Ovarian
cancer
is
the
leading
cause
of
gynecological
death
worldwide,
and
its
poor
prognosis
high
mortality
seriously
affect
life
ovarian
patients.
Runt-related
transcription
factor
1
(RUNX1)
has
been
widely
studied
in
hematological
diseases
plays
an
important
role
occurrence
development
diseases.
In
recent
years,
studies
have
reported
roles
RUNX1
solid
tumors,
including
significantly
increased
expression
cancer.
cancer,
dysregulation
signaling
pathway
implicated
tumor
progression,
metastasis,
response
to
therapy.
At
same
time,
decreased
can
improve
sensitivity
clinical
chemotherapy
provide
theoretical
support
for
subsequent
diagnosis
treatment
target
providing
options
patients
with
However,
remains
unclear.
Therefore,
this
article
reviews
relationship
between
as
well
closely
regulated
pathways,
some
inspiration
future
research
on
other