BacDive in 2025: the core database for prokaryotic strain data DOI Creative Commons
Isabel Schober, Julia Koblitz, J. Sarda Carbasse

и другие.

Nucleic Acids Research, Год журнала: 2024, Номер 53(D1), С. D748 - D756

Опубликована: Окт. 29, 2024

Abstract In 2025, the bacterial diversity database BacDive is leading for strain-level and archaeal information. It has been selected as an ELIXIR Core Data Resource well a Global Biodata Resource. Since its initial release more than ten years ago, (https://bacdive.dsmz.de) grown tremendously in content functionalities, comprehensive resource covering phenotypic of prokaryotes with data on taxonomy, morphology, physiology, cultivation, more. The current (2023.2) contains 2.6 million points 97 334 strains, reflecting increase by 52% since previous publication 2021. This remarkable growth can largely be attributed to integration world-wide largest collection Analytical Profile Index (API) test results, which are now fully integrated into searchable. A novel knowledge graph provides powerful search options through SPARQL endpoint, including possibility federated searches across multiple sources. high-quality provided increasingly being used training artificial intelligence models resulting genome-based predictions high confidence fill gaps database.

Язык: Английский

BacDive in 2025: the core database for prokaryotic strain data DOI Creative Commons
Isabel Schober, Julia Koblitz, J. Sarda Carbasse

и другие.

Nucleic Acids Research, Год журнала: 2024, Номер 53(D1), С. D748 - D756

Опубликована: Окт. 29, 2024

Abstract In 2025, the bacterial diversity database BacDive is leading for strain-level and archaeal information. It has been selected as an ELIXIR Core Data Resource well a Global Biodata Resource. Since its initial release more than ten years ago, (https://bacdive.dsmz.de) grown tremendously in content functionalities, comprehensive resource covering phenotypic of prokaryotes with data on taxonomy, morphology, physiology, cultivation, more. The current (2023.2) contains 2.6 million points 97 334 strains, reflecting increase by 52% since previous publication 2021. This remarkable growth can largely be attributed to integration world-wide largest collection Analytical Profile Index (API) test results, which are now fully integrated into searchable. A novel knowledge graph provides powerful search options through SPARQL endpoint, including possibility federated searches across multiple sources. high-quality provided increasingly being used training artificial intelligence models resulting genome-based predictions high confidence fill gaps database.

Язык: Английский

Процитировано

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