Journal of the American Chemical Society,
Год журнала:
2023,
Номер
145(5), С. 2711 - 2732
Опубликована: Янв. 27, 2023
Only
around
20%
of
the
human
proteome
is
considered
to
be
druggable
with
small-molecule
antagonists.
This
leaves
some
most
compelling
therapeutic
targets
outside
reach
ligand
discovery.
The
concept
targeted
protein
degradation
(TPD)
promises
overcome
these
limitations.
In
brief,
TPD
dependent
on
small
molecules
that
induce
proximity
between
a
interest
(POI)
and
an
E3
ubiquitin
ligase,
causing
ubiquitination
POI.
this
perspective,
we
want
reflect
current
challenges
in
field,
discuss
how
advances
multiomics
profiling,
artificial
intelligence,
machine
learning
(AI/ML)
will
vital
overcoming
them.
presented
roadmap
discussed
context
degraders
but
equally
applicable
for
other
emerging
proximity-inducing
modalities.
Signal Transduction and Targeted Therapy,
Год журнала:
2021,
Номер
6(1)
Опубликована: Май 31, 2021
Abstract
Due
to
the
advantages
in
efficacy
and
safety
compared
with
traditional
chemotherapy
drugs,
targeted
therapeutic
drugs
have
become
mainstream
cancer
treatments.
Since
first
tyrosine
kinase
inhibitor
imatinib
was
approved
enter
market
by
US
Food
Drug
Administration
(FDA)
2001,
an
increasing
number
of
small-molecule
been
developed
for
treatment
malignancies.
By
December
2020,
89
antitumor
FDA
National
Medical
Products
(NMPA)
China.
Despite
great
progress,
anti-cancer
still
face
many
challenges,
such
as
a
low
response
rate
drug
resistance.
To
better
promote
development
we
conducted
comprehensive
review
according
target
classification.
We
present
all
well
important
candidates
clinical
trials
each
target,
discuss
current
provide
insights
perspectives
research
drugs.
Nature Communications,
Год журнала:
2020,
Номер
11(1)
Опубликована: Ноя. 18, 2020
Abstract
Severe
Acute
Respiratory
Syndrome
Coronavirus
2
(SARS-CoV-2),
the
pathogen
that
causes
disease
COVID-19,
produces
replicase
polyproteins
1a
and
1ab
contain,
respectively,
11
or
16
nonstructural
proteins
(nsp).
Nsp5
is
main
protease
(M
pro
)
responsible
for
cleavage
at
eleven
positions
along
these
polyproteins,
including
its
own
N-
C-terminal
boundaries,
representing
essential
processing
events
subsequent
viral
assembly
maturation.
We
have
determined
X-ray
crystallographic
structures
of
this
cysteine
in
wild-type
free
active
site
state
1.8
Å
resolution,
acyl-enzyme
intermediate
with
native
autocleavage
sequence
1.95
resolution
product
bound
2.0
by
employing
an
mutation
(C145A).
characterize
stereochemical
features
critical
hydrogen
bonding
distances
underlying
catalysis
Cys/His
dyad
oxyanion
hole.
also
identify
a
highly
ordered
water
molecule
position
compatible
role
as
deacylating
nucleophile
catalytic
mechanism
binding
groove
conformational
changes
dimerization
interface
occur
upon
formation
acyl-enzyme.
Collectively,
snapshots
provide
valuable
mechanistic
structural
insights
future
antiviral
therapeutic
development
revised
molecular
docking
strategies
based
on
M
inhibition.
Frontiers in Cardiovascular Medicine,
Год журнала:
2020,
Номер
7
Опубликована: Март 10, 2020
Obesity
and
diabetes
are
leading
causes
of
cardiovascular
morbidity
mortality.
Although
extensive
strides
have
been
made
in
the
treatments
for
non-diabetic
atherosclerosis
its
complications,
patients
with
diabetes,
these
therapies
provide
less
benefit
protection
from
disease
(CVD).
These
considerations
spur
concept
that
diabetes-specific,
disease-modifying
essential
to
identify,
especially
as
epidemics
obesity
continue
expand.
Hence,
hyperglycemia
is
a
defining
feature
it
logical
probe
impact
specific
consequences
on
vessel
wall,
immune
cell
perturbation
endothelial
dysfunction
–
all
harbingers
development
CVD.
In
this
context,
high
levels
blood
glucose
stimulate
formation
irreversible
advanced
glycation
end
products,
products
nonenzymatic
oxidation
proteins
lipids.
AGEs
accumulate
diabetic
circulation
tissues
interaction
their
chief
cellular
receptor,
receptor
AGE
or
RAGE,
contributes
vascular
perturbation.
The
cytoplasmic
domain
RAGE
lacks
endogenous
kinase
activity;
discovery
intracellular
binds
formin,
DIAPH1,
DIAPH1
ligand-mediated
signal
transduction,
identifies
means
by
which
functions
highlights
new
target
therapeutic
interruption
signaling.
human
subjects,
prominent
signals
activity
include
presence
two
forms
soluble
sRAGE
secretory
(es)
RAGE.
Further,
genetic
studies
revealed
single
nucleotide
polymorphisms
(SNPs)
AGER
gene
(AGER
encoding
RAGE)
display
associations
This
Review
presents
current
knowledge
regarding
roles
Studies
both
subjects
animal
models
presented
highlight
breadth
evidence
linking
metabolic
disorders.
Natural Product Reports,
Год журнала:
2021,
Номер
38(11), С. 2100 - 2129
Опубликована: Янв. 1, 2021
The
continual
growth
of
publicly
available
genomic
databases
offers
researchers
unprecedented
bioinformatic
opportunities.
This
review
examines
different
approaches
to
mining
data
for
the
targeted
discovery
bioactive
natural
products.
Journal of Medicinal Chemistry,
Год журнала:
2023,
Номер
66(14), С. 9278 - 9296
Опубликована: Июль 12, 2023
The
intracellular
interactions
of
biomolecules
can
be
maneuvered
to
redirect
signaling,
reprogram
the
cell
cycle,
or
decrease
infectivity
using
only
a
few
dozen
atoms.
Such
"molecular
glues,"
which
drive
both
novel
and
known
between
protein
partners,
represent
an
enticing
therapeutic
strategy.
Here,
we
review
methods
approaches
that
have
led
identification
small-molecule
molecular
glues.
We
first
classify
current
FDA-approved
glues
facilitate
selection
discovery
methods.
then
survey
two
broad
method
strategies,
where
highlight
importance
factors
such
as
experimental
conditions,
software
packages,
genetic
tools
for
success.
hope
this
curation
methodologies
directed
will
inspire
diverse
research
efforts
targeting
multitude
human
diseases.
Signal Transduction and Targeted Therapy,
Год журнала:
2024,
Номер
9(1)
Опубликована: Дек. 5, 2024
Abstract
Protein-protein
interactions
(PPIs)
are
fundamental
to
cellular
signaling
and
transduction
which
marks
them
as
attractive
therapeutic
drug
development
targets.
What
were
once
considered
be
undruggable
targets
have
become
increasingly
feasible
due
the
progress
that
has
been
made
over
last
two
decades
rapid
technological
advances.
This
work
explores
influence
of
innovations
on
PPI
research
development.
Additionally,
diverse
strategies
for
discovering,
modulating,
characterizing
PPIs
their
corresponding
modulators
examined
with
aim
presenting
a
streamlined
pipeline
advancing
PPI-targeted
therapeutics.
By
showcasing
carefully
selected
case
studies
in
modulator
discovery
development,
we
illustrate
efficacy
various
identifying,
optimizing,
overcoming
challenges
associated
design.
The
valuable
lessons
insights
gained
from
identification,
optimization,
approval
discussed
demonstrating
transitioned
beyond
early-stage
now
represent
prime
opportunity
significant
potential.
examples
encompass
those
developed
cancer,
inflammation
immunomodulation,
well
antiviral
applications.
perspective
aims
establish
foundation
effective
targeting
modulation
using
pave
way
future
ACS Pharmacology & Translational Science,
Год журнала:
2025,
Номер
8(3), С. 654 - 672
Опубликована: Фев. 10, 2025
Dysregulation
of
correct
protein
tau
homeostasis
represents
the
seed
for
development
several
devastating
central
nervous
system
disorders,
known
as
tauopathies,
that
affect
millions
people
worldwide.
Despite
massive
public
and
private
support
to
research
funding,
these
diseases
still
represent
unmet
medical
needs.
In
fact,
tau-targeting
tools
developed
date
have
failed
translate
into
clinic.
Recently,
taking
advantage
modes
nature
uses
mediate
flow
information
in
cells,
researchers
a
new
class
molecules,
called
proximity-inducing
modulators,
which
exploit
spatial
proximity
modulate
function(s)
redirect
cellular
processes.
this
perspective,
after
brief
discussion
about
classic
approaches,
we
will
discuss
different
classes
modulators
so
far
highlight
applications
protein's
function
tau-induced
toxicity.
Molecules,
Год журнала:
2020,
Номер
25(20), С. 4597 - 4597
Опубликована: Окт. 9, 2020
Studying
disease
models
at
the
molecular
level
is
vital
for
drug
development
in
order
to
improve
treatment
and
prevent
a
wide
range
of
human
pathologies.
Microbial
infections
are
still
major
challenge
because
pathogens
rapidly
continually
evolve
developing
resistance.
Cancer
cells
also
change
genetically,
current
therapeutic
techniques
may
be
(or
become)
ineffective
many
cases.
The
pathology
neurological
diseases
remains
an
enigma,
exact
etiology
underlying
mechanisms
largely
unknown.
Viral
spread
develop
much
more
quickly
than
does
corresponding
research
needed
combat
these
infections;
present
most
relevant
outbreak
SARS-CoV-2,
which
originated
Wuhan,
China,
illustrates
critical
immediate
need
design
techniques.
Modern
day
discovery
time-consuming,
expensive
process.
Each
new
takes
excess
10
years
costs
on
average
billion
US
dollars.
This
demonstrates
complete
redesign
or
novel
strategies.
Nuclear
Magnetic
Resonance
(NMR)
has
played
role
ever
since
its
introduction
several
decades
ago.
In
just
three
decades,
NMR
become
“gold
standard”
platform
technology
medical
pharmacology
studies.
this
review,
we
applications
spectroscopy
development.
basic
concepts,
theories,
commonly
used
presented.
We
summarize
advantages
limitations
primary
methods
Journal of Hematology & Oncology,
Год журнала:
2020,
Номер
13(1)
Опубликована: Март 30, 2020
Abstract
Protein-protein
interactions
(PPIs)
are
central
to
a
variety
of
biological
processes,
and
their
dysfunction
is
implicated
in
the
pathogenesis
range
human
diseases,
including
cancer.
Hence,
inhibition
PPIs
has
attracted
significant
attention
drug
discovery.
Covalent
inhibitors
have
been
reported
achieve
high
efficiency
through
forming
covalent
bonds
with
cysteine
or
other
nucleophilic
residues
target
protein.
Evidence
suggests
that
there
reduced
risk
for
development
resistance
against
drugs,
which
major
challenge
areas
such
as
oncology
infectious
diseases.
Recent
improvements
structural
biology
chemical
reactivity
enabled
design
potent
selective
PPI
inhibitors.
In
this
review,
we
will
highlight
therapeutic
agents
targeting
cancer
therapy.
Journal of Medicinal Chemistry,
Год журнала:
2020,
Номер
64(1), С. 26 - 41
Опубликована: Дек. 21, 2020
Alzheimer's
disease
(AD),
like
other
multifactorial
diseases,
is
the
result
of
a
systemic
breakdown
different
physiological
networks.
As
result,
several
lines
evidence
suggest
that
it
could
be
more
efficiently
tackled
by
molecules
directed
toward
dysregulated
biochemical
targets
or
pathways.
In
this
context,
selection
to
which
new
will
crucial.
For
years,
design
such
multitarget-directed
ligands
(MTDLs)
has
been
based
on
main
involved
in
"cholinergic"
and
"β-amyloid"
hypothesis.
Recently,
there
have
some
reports
MTDLs
targeting
glycogen
synthase
kinase
3β
(GSK-3β)
enzyme,
due
its
appealing
properties.
Indeed,
enzyme
tau
hyperphosphorylation,
controls
multitude
CNS-specific
signaling
pathways,
establishes
strict
connections
with
factors
implicated
AD
pathogenesis.
present
Miniperspective,
we
discuss
reasons
behind
development
GSK-3β-directed
highlight
recent
efforts
obtain
these
classes
as
potential
disease-modifying
agents.