Ecology and functional potential of phyllosphere yeasts

Trends in Plant Science, Год журнала: 2022, Номер 27(11), С. 1109 - 1123

Опубликована: Июль 13, 2022

Язык: Английский

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Proposal of one new family, seven new genera and seventy new basidiomycetous yeast species mostly isolated from Tibet and Yunnan provinces, China

Studies in Mycology, Год журнала: 2024, Номер 109(1), С. 57 - 154

Опубликована: Июнь 28, 2024

Язык: Английский

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Functional Clustering of Metabolically Related Genes Is Conserved across Dikarya

Journal of Fungi, Год журнала: 2023, Номер 9(5), С. 523 - 523

Опубликована: Апрель 28, 2023

Transcriptional regulation is vital for organismal survival, with many layers and mechanisms collaborating to balance gene expression. One layer of this genome organization, specifically the clustering functionally related, co-expressed genes along chromosomes. Spatial organization allows position effects stabilize RNA expression transcription, which can be advantageous a number reasons, including reductions in stochastic influences between products. The co-regulated families into functional clusters occurs extensively Ascomycota fungi. However, less characterized within related Basidiomycota fungi despite uses applications species clade. This review will provide insight prevalence, purpose, significance across Dikarya, foundational studies from Ascomycetes current state our understanding throughout representative Basidiomycete species.

Язык: Английский

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Fungalpedia, an illustrated compendium of the fungi and fungus-like taxa

Mycosphere, Год журнала: 2023, Номер 14(1), С. 1835 - 1959

Опубликована: Янв. 1, 2023

Fungalpedia is an online illustrated compendium of the fungi and fungus-like taxa.In this database we provide notes on genera higher taxa definitions descriptions terms generally used in mycology.Where possible are enhanced with plates drawings to make easier understand.In case genera, 1) habit, host lifestyle, 2) level classification, 3) genes other evidence support genus, 4) main characters, 5) a critical assessment genus its placement, 6) photographic and/or characters genus.For give similar information but drawing will not be provided.For various explanations diagrams facilitate understanding.We also accounts eminent mycologists both living deceased.We methodology biotechnology.Although many entries by invited authors published scientific papers, interested persons welcome contribute modify existing entries.Those should contact lead author.

Язык: Английский

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The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics

bioRxiv (Cold Spring Harbor Laboratory), Год журнала: 2023, Номер unknown

Опубликована: Сен. 28, 2023

A global genome database of all Earth's species diversity could be a treasure trove scientific discoveries. However, regardless the major advances in sequencing technologies, only tiny fraction have genomic information available. To contribute to more complete planetary database, scientists and institutions across world united under Earth BioGenome Project (EBP), which plans sequence assemble high-quality reference genomes for ~1.5 million recognized eukaryotic through stepwise phased approach. As initiative transitions into Phase II, where 150,000 are sequenced just four years, worldwide participation project will fundamental success. European node EBP, Reference Genome Atlas (ERGA) seeks implement new decentralised, accessible, equitable inclusive model producing genomes, inform EBP as it scales. embark on this mission, ERGA launched Pilot establish network Europe develop test first infrastructure its kind coordinated distributed production 98 from sample providers 34 countries. Here we outline process challenges faced during development pilot resources, explore effectiveness approach terms production, considering also equity inclusion. The outcomes lessons learned provide solid foundation while offering key learnings other transnational national resource projects.

Язык: Английский

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Fungi species description rates confirm high global diversity and suggest half remain unnamed

Frontiers of Biogeography, Год журнала: 2024, Номер 16(2)

Опубликована: Апрель 7, 2024

Global estimates of the number species Fungi have ranged from 1.5 to 13.2 million, but been based more on opinion and simple ratios than quantitative assessment. We analysed trends in rate description fungal over four centuries, noted use molecular methods delimitation, used a statistical model designed for such data predict future trends. A total 144,035 were analysed, along with smaller groups extracted core dataset that approximated biological ecological traits. The explored included fungi medical significance (728 spp), those associated marine environment (972 rust smut (9,125 arthropod ectoparasites class Laboulbeniomycetes (2,376 mushroom-forming Agaricomycetes (37,717 budding yeasts subphylum Saccharomycotina (1,165 Dothideomycetes (30,912 lichenized classes Lecanoromycetes Arthoniomycetes (12,154 spp). There was an acceleration overall rates within last two decades accompanied by increased genetic new descriptions. Mushroom-forming, lichenized, plant-associated predicted experience greatest increase species. Increased are supported authors describing However, described per author year has declining since 1875. Because less 10% currently accepted corresponding type specimens, should not be discriminate without phenotypic information. An additional 68,750 (48%) this century, making least well-described Kingdom assessed date.

Язык: Английский

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Extracellular phospholipase, protease and hemolysin production by strains of opportunistic yeasts from the excreta of Mew Gulls breeding in natural and urban habitats

Veterinary Research Communications, Год журнала: 2025, Номер 49(2)

Опубликована: Янв. 3, 2025

Язык: Английский

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Yeast identification and characterisation

Elsevier eBooks, Год журнала: 2025, Номер unknown, С. 53 - 79

Опубликована: Янв. 1, 2025

Язык: Английский

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Tropical lakes as a novel source of oleaginous yeasts with lipid profiles for biodiesel, oleochemical, and nutraceutical applications

World Journal of Microbiology and Biotechnology, Год журнала: 2025, Номер 41(3)

Опубликована: Март 1, 2025

Abstract Oleaginous yeasts have emerged as promising microbial cell factories for lipid production, offering sustainable alternatives to traditional sources of biodiesel and nutraceuticals. In this study, the accumulation potential yeast strains isolated from two freshwater aquatic ecosystems in Cali, Colombia, was evaluated identify novel candidates biotechnological applications. A total 56 were tested their oleaginous nature using a gravimetric assay with glucose carbon source. Of assessed strains, 46.15% exceeded 20% yields relative dry biomass. Seven selected glycerol source, but only five further characterized profiles. Molecular identification revealed diverse species, including Aureobasidium sp., Papiliotrema rajashtanensis, Rhodotorula spp., Clavispora lusitaniae . The demonstrated unique profiles, high proportions monounsaturated polyunsaturated fatty acids, such oleic acid (C18:1) linoleic (C18:2). particular, sp. accumulated uncommon acids petroselinic under conditions induced by glycerol. This acid, which has double bond position 6,7 melting point 33 °C, highlights its an alternative margarine well precursor sophorolipids, estolide esters, soaps, plastics. exhibited very long-chain docosadienoic docosatrienoic profile. These findings underscore value lentic systems producers, paving way innovations biofuels, nutraceuticals, oleochemicals.

Язык: Английский

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Green Chemistry Approaches for Sustainable Synthesis of Inorganic Nanomaterials

Опубликована: Янв. 1, 2025

Язык: Английский

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