Metabolomics and WGCNA Analyses Reveal the Underlying Mechanisms of Resistance to Botrytis cinerea in Hazelnut DOI Open Access
Jun Sun,

Liyuan Lu,

Juanjuan Liu

и другие.

Genes, Год журнала: 2024, Номер 16(1), С. 2 - 2

Опубликована: Дек. 24, 2024

Hazelnut (Corylus), a significant woody oil tree species in economic forests, faces production constraints due to biotic stresses, with Husk Brown Rot, caused by the pathogenic necrotrophic fungus Botrytis cinerea (B. cinerea), being most severe. To date, limited information is available regarding resistance of hazelnuts B. cinerea. better understand mechanisms hazelnut, we conducted metabolomics and WGCNA analyses cinerea-resistant Ping'ou hybrid hazelnut variety (Dawei; DW) susceptible (Qiuxiang; QX). In this study, weighted gene co-expression network analysis (WGCNA, correlation analysis) were applied elucidate underlying different varieties Our study focused on metabolome profiles DW QX plants after 72 h infection. Venn QX_0 vs. DW_0 QX_72 DW_72 revealed 120 differential accumulation metabolites (DAMs) that upregulated. Among these metabolites, concentrations flavonoids phenolic acids significantly higher than those QX, respectively, suggesting elevated levels compounds contribute substantially against 3,4-hydroxyphenyllactic acid phloretin more abundant infection This provides (flavonoids acids) Furthermore, identified as pivotal modulating Through analyses, four transcription factors (WRKY19, HSFC1, ERF071, RAP2-1) are likely regulate synthesis 3,4-dihydroxyphenyllactic phloretin. crucial insights for further investigation into regulatory associated

Язык: Английский

Plant secondary metabolites against biotic stresses for sustainable crop protection DOI
Tanzim Jahan, Md. Nurul Huda, Kaixuan Zhang

и другие.

Biotechnology Advances, Год журнала: 2025, Номер unknown, С. 108520 - 108520

Опубликована: Янв. 1, 2025

Язык: Английский

Процитировано

3

Strategies to Delay Ethylene-Mediated Ripening in Climacteric Fruits: Implications for Shelf Life Extension and Postharvest Quality DOI Creative Commons
Ramiro Alonso-Salinas, Santiago López‐Miranda, Antonio J. Pérez-López

и другие.

Horticulturae, Год журнала: 2024, Номер 10(8), С. 840 - 840

Опубликована: Авг. 8, 2024

Climacteric fruits undergo a characteristic ripening process regulated by ethylene, key plant hormone. Extending the shelf life of these while preserving their postharvest quality poses significant challenge for food industry. This review provides comprehensive overview physiological and molecular strategies to delay ethylene-mediated in climacteric impact on life, quality, sensory attributes, volatile compounds. Additionally, it examines role ethylene fruit ripening, analysing various managing including inhibitors, adsorbents, scavengers catalytic oxidation. concludes with future research directions genetic approaches reducing production or responsiveness fruits, integrated strategies, environmental considerations, commercial applications improving handling quality.

Язык: Английский

Процитировано

6

FaERF2 activates two β-1,3-glucanase genes to enhance strawberry resistance to Botrytis cinerea DOI

Yue Peng,

Morong Liang,

Xin Zhang

и другие.

Plant Science, Год журнала: 2024, Номер 347, С. 112179 - 112179

Опубликована: Июль 14, 2024

Язык: Английский

Процитировано

4

Mining of Candidate Novel Alleles Using GWAS and Haplotype Identification for Rice Blast Resistance DOI Open Access
Williams Mohanavel, Ajay Prasanth Ramalingam, Bharathi Ayyenar

и другие.

Plant Pathology, Год журнала: 2025, Номер unknown

Опубликована: Фев. 2, 2025

ABSTRACT Blast caused by Pyricularia oryzae (synonym Magnaporthe ) is a major fungal disease affecting productivity and quality in rice‐growing areas globally. A genome‐wide association study (GWAS) was performed using the blast score(s) whole‐genome sequence data pertaining to subset of 280 diverse accessions IRRI 3 K Rice Genome panel. Continuous variation observed, with 8.9% total resistant, 39.6% moderately 37.2% susceptible 14.2% susceptible, average severity ratings 0 3, > 5, 5 7 9, respectively, indicating polygenic inheritance trait. We identified potential different subpopulations resistance reaction (IRGC 127151 [subtrop], 127738 [ind2], 132245 [aro] 127130 [aus]), having lowest < 2. GWAS revealed significant 22 quantitative trait nucleotides (QTNs)—20 main effect two interaction effect—linked that led identification 43 plant defence‐related candidate genes. The haplo‐pheno analysis genes (LOC_Os02g06470, LOC_Os02g06510, LOC_Os07g34370, LOC_Os08g29760, LOC_Os10g07470 LOC_Os12g34290) associated superior haplotypes were play critical role defence mechanisms. resistant sources hold promise for stacking into an elite genetic background haplotype‐based breeding approach development cultivars wide range pathotypes.

Язык: Английский

Процитировано

0

The ERF transcription factor TaERF13-2B functions as a negative regulator of drought tolerance in Arabidopsis and wheat DOI Creative Commons
Yang Yu,

Conglei Wang,

Jianhe Wang

и другие.

Frontiers in Plant Science, Год журнала: 2025, Номер 16

Опубликована: Март 27, 2025

Ethylene response factors (ERFs) are transcription that essential in modulating drought stress responses plants such as Arabidopsis and rice. However, the functional role of ERF wheat remains unclear. We identified 33 genes under using transcriptomic analysis categorized them into eight subfamilies (I–VIII). Among them, 12 drought-responsive candidate were upregulated, TaERF13-2B was selected for further analysis. overexpression resulted significantly reduced survival rates conditions with decreased expression stress-responsive antioxidant enzyme genes, indicating gene elevated sensitivity transgenic . In wheat, increased malondialdehyde accumulation, chlorophyll proline levels, activity. Furthermore, antioxidant-related suppressed, suggesting negatively regulates to stress. The interactions between TaCIPK9 confirmed yeast two-hybrid bimolecular fluorescence complementation. Overall, these discoveries deepen our insights family contribute elucidation wheat.

Язык: Английский

Процитировано

0

Comparative transcriptome analysis and candidate gene mining for fire blight of Pear resistance in Korla fragrant Pear (Pyrus sinkiangensis Yü) DOI Creative Commons
Yue Li, Yiwei Ye, Huan Wei

и другие.

Scientific Reports, Год журнала: 2025, Номер 15(1)

Опубликована: Апрель 29, 2025

Abstract Fire blight of pear is caused by Erwinia amylovora, which can cause devastating damage to trees and other pome fruit worldwide. has resulted in a reduction the production Korla fragrant pears Xinjiang, China, as well decrease their quality taste, causing severe economic losses. To this end, comparative transcriptome analysis common (KFP, susceptible) bud mutation line (1910, resistant) at three inoculation periods was conducted. Clustering principal component (PCA) RNA-seq data revealed that differences between lines were greater than those within lines. A total 7271 DEGs identified line, while 11,937 KFP. Between KFP resistant material identified, significantly enriched pathways photosynthesis, jasmonic acid metabolic process, flavonoid biosynthesis, starch sucrose metabolism. 8 clusters for all (17,354) via k-means, KEGG pathway annotations performed each individual cluster. In addition, 1027 differentially expressed transcription factors (TFs) clustered into five clusters, TFs with largest fold change cluster identified. gene coexpression network further constructed through weighted correlation (WGCNA), 15 key genes determine fire resistance These research results provide theoretical basis deeper understanding molecular mechanism new genetic resources study blight.

Язык: Английский

Процитировано

0

Functional divergence of LncRNAs in wheat-fungal interactions: insights from stem rust-responsive wheat transcriptomes DOI

S. Jyothsna,

Minu M. Nair,

Alagu Manickavelu

и другие.

Physiology and Molecular Biology of Plants, Год журнала: 2025, Номер unknown

Опубликована: Май 15, 2025

Язык: Английский

Процитировано

0

Unveiling the evolutionary and transcriptional landscape of ERF transcription factors in wheat genomes: a genome-wide comparative analysis DOI Creative Commons
Liwen Wang, Hongjun Zhao,

Runfang Li

и другие.

BMC Genomics, Год журнала: 2025, Номер 26(1)

Опубликована: Май 19, 2025

Ethylene response factors (ERFs), belonging to the AP2/ERF superfamily, play vital roles in plant growth, development, and stress responses. The evolutionary expression features of members ERF gene family have not yet been extensively analyzed through comprehensive comparative genomics across various diploid, tetraploid, hexaploid wheat genomes. In this study, we identified a total 2,967 genes one two five genomes using characteristics conserved domains proteins. Phylogenetic analysis revealed that clustered into main groups. Analyses expansion indicated IIIc IX (sub)groups were observed show tetraploid compared diploid wheat. Tandem duplication was as key mechanism for expansion, with varying proportions different Ancient evidence traced Amborella trichopoda reference, revealing retention copies both Then, under salt Triticum aestivum, identifying 86 consistently up-regulated 14 down-regulated genes, reported tolerant disease resistant These findings provide valuable insights dynamics functional wheat, paving way genetic breeding molecular improvement species.

Язык: Английский

Процитировано

0

Genome-wide analysis of AP2/ERF gene family and functional characterization of StoERF109 in Solanum torvum response to Verticillium dahliae infection DOI

Feng Chang,

Yun Dong,

Lei Shen

и другие.

Planta, Год журнала: 2025, Номер 262(1)

Опубликована: Май 20, 2025

Язык: Английский

Процитировано

0

Functions of transcription factor superfamilies in rice immunity DOI Creative Commons
Sang Ryeol Park, Yu-jeong Jeong, Seungmin Son

и другие.

The Crop Journal, Год журнала: 2024, Номер unknown

Опубликована: Ноя. 1, 2024

Язык: Английский

Процитировано

3