Protein translation: biological processes and therapeutic strategies for human diseases DOI Creative Commons

Xuechao Jia,

Xinyu He,

Chuntian Huang

и другие.

Signal Transduction and Targeted Therapy, Год журнала: 2024, Номер 9(1)

Опубликована: Фев. 23, 2024

Abstract Protein translation is a tightly regulated cellular process that essential for gene expression and protein synthesis. The deregulation of this increasingly recognized as critical factor in the pathogenesis various human diseases. In review, we discuss how deregulated can lead to aberrant synthesis, altered functions, disease progression. We explore key mechanisms contributing translation, including functional alterations factors, tRNA, mRNA, ribosome function. Deregulated leads abnormal expression, disrupted signaling, perturbed functions- all which contribute pathogenesis. development profiling techniques along with mass spectrometry-based proteomics, mRNA sequencing single-cell approaches have opened new avenues detecting diseases related errors. Importantly, highlight recent advances therapies targeting translation-related disorders their potential applications neurodegenerative diseases, cancer, infectious cardiovascular Moreover, growing interest lies targeted aimed at restoring precise control over diseased cells discussed. conclusion, comprehensive review underscores role its therapeutic target. Advancements understanding molecular deregulation, coupled therapies, offer promising improving outcomes Additionally, it will unlock doors possibility precision medicine by offering personalized deeper underpinnings future.

Язык: Английский

A single-cell atlas of chromatin accessibility in the human genome DOI Creative Commons
Kai Zhang, James D. Hocker, Michael Miller

и другие.

Cell, Год журнала: 2021, Номер 184(24), С. 5985 - 6001.e19

Опубликована: Ноя. 1, 2021

Current catalogs of regulatory sequences in the human genome are still incomplete and lack cell type resolution. To profile activity gene elements diverse types tissues body, we applied single-cell chromatin accessibility assays to 30 adult tissue from multiple donors. We integrated these datasets with previous data 15 fetal reveal status open for ∼1.2 million candidate cis-regulatory (cCREs) 222 distinct comprised >1.3 nuclei. used maps delineate cell-type-specificity cCREs systematically interpret noncoding variants associated complex traits diseases. This rich resource provides a foundation analysis programs across tissues, life stages, organ systems.

Язык: Английский

Процитировано

333

Maturation and circuit integration of transplanted human cortical organoids DOI Creative Commons
Omer Revah, Felicity Gore,

Kevin W. Kelley

и другие.

Nature, Год журнала: 2022, Номер 610(7931), С. 319 - 326

Опубликована: Окт. 12, 2022

Abstract Self-organizing neural organoids represent a promising in vitro platform with which to model human development and disease 1–5 . However, lack the connectivity that exists vivo, limits maturation makes integration other circuits control behaviour impossible. Here we show stem cell-derived cortical transplanted into somatosensory cortex of newborn athymic rats develop mature cell types integrate sensory motivation-related circuits. MRI reveals post-transplantation organoid growth across multiple lines animals, whereas single-nucleus profiling shows progression corticogenesis emergence activity-dependent transcriptional programs. Indeed, neurons display more complex morphological, synaptic intrinsic membrane properties than their counterparts, enables discovery defects derived from individuals Timothy syndrome. Anatomical functional tracings receive thalamocortical corticocortical inputs, vivo recordings activity demonstrate these inputs can produce responses cells. Finally, extend axons throughout rat brain optogenetic activation drive reward-seeking behaviour. Thus, engage host We anticipate this approach will be useful for detecting circuit-level phenotypes patient-derived cells cannot otherwise uncovered.

Язык: Английский

Процитировано

320

Spatial epigenome–transcriptome co-profiling of mammalian tissues DOI Creative Commons
Di Zhang, Yanxiang Deng, Petra Kukanja

и другие.

Nature, Год журнала: 2023, Номер 616(7955), С. 113 - 122

Опубликована: Март 15, 2023

Abstract Emerging spatial technologies, including transcriptomics and epigenomics, are becoming powerful tools for profiling of cellular states in the tissue context 1–5 . However, current methods capture only one layer omics information at a time, precluding possibility examining mechanistic relationship across central dogma molecular biology. Here, we present two technologies spatially resolved, genome-wide, joint epigenome transcriptome by cosequencing chromatin accessibility gene expression, or histone modifications (H3K27me3, H3K27ac H3K4me3) expression on same section near-single-cell resolution. These were applied to embryonic juvenile mouse brain, as well adult human map how epigenetic mechanisms control transcriptional phenotype cell dynamics tissue. Although highly concordant features identified either also observed distinct patterns, suggesting their differential roles defining states. Linking pixel allows uncovering new insights priming, differentiation regulation within architecture. great interest life science biomedical research.

Язык: Английский

Процитировано

211

Cell-type-specific cis-eQTLs in eight human brain cell types identify novel risk genes for psychiatric and neurological disorders DOI
Julien Bryois,

Daniela Calini,

Will Macnair

и другие.

Nature Neuroscience, Год журнала: 2022, Номер 25(8), С. 1104 - 1112

Опубликована: Авг. 1, 2022

Язык: Английский

Процитировано

179

Human brain organogenesis: Toward a cellular understanding of development and disease DOI Creative Commons

Kevin W. Kelley,

Sergiu P. Paşca

Cell, Год журнала: 2021, Номер 185(1), С. 42 - 61

Опубликована: Ноя. 11, 2021

Язык: Английский

Процитировано

176

Molecular and cellular evolution of the primate dorsolateral prefrontal cortex DOI
Shaojie Ma, Mario Škarica, Qian Li

и другие.

Science, Год журнала: 2022, Номер 377(6614)

Опубликована: Авг. 25, 2022

The granular dorsolateral prefrontal cortex (dlPFC) is an evolutionary specialization of primates that centrally involved in cognition. We assessed more than 600,000 single-nucleus transcriptomes from adult human, chimpanzee, macaque, and marmoset dlPFC. Although most cell subtypes defined transcriptomically are conserved, we detected several exist only a subset species as well substantial species-specific molecular differences across homologous neuronal, glial, non-neural subtypes. latter exemplified by human-specific switching between expression the neuropeptide somatostatin tyrosine hydroxylase, rate-limiting enzyme dopamine production certain interneurons. above also illustrated neuropsychiatric risk gene

Язык: Английский

Процитировано

156

Characterizing cis-regulatory elements using single-cell epigenomics DOI
Sebastian Preißl, Kyle J. Gaulton, Bing Ren

и другие.

Nature Reviews Genetics, Год журнала: 2022, Номер 24(1), С. 21 - 43

Опубликована: Июль 15, 2022

Язык: Английский

Процитировано

149

Functional inference of gene regulation using single-cell multi-omics DOI
Vinay K. Kartha, Fabiana M. Duarte, Yan Hu

и другие.

Cell Genomics, Год журнала: 2022, Номер 2(9), С. 100166 - 100166

Опубликована: Авг. 4, 2022

Язык: Английский

Процитировано

149

Proper acquisition of cell class identity in organoids allows definition of fate specification programs of the human cerebral cortex DOI Creative Commons
Ana Uzquiano, Amanda J. Kedaigle, Martina Pigoni

и другие.

Cell, Год журнала: 2022, Номер 185(20), С. 3770 - 3788.e27

Опубликована: Сен. 1, 2022

Язык: Английский

Процитировано

149

Genomics, convergent neuroscience and progress in understanding autism spectrum disorder DOI
Helen Rankin Willsey, A. Jeremy Willsey, Belinda Wang

и другие.

Nature reviews. Neuroscience, Год журнала: 2022, Номер 23(6), С. 323 - 341

Опубликована: Апрель 19, 2022

Язык: Английский

Процитировано

141