Green‐to‐red spectral labeling: A novel polysynaptic retrograde tracing strategy in the marker footprint mouse model DOI Creative Commons
Yige Song,

Jinyu Zeng,

Yunyun Han

и другие.

Animal Models and Experimental Medicine, Год журнала: 2025, Номер unknown

Опубликована: Апрель 25, 2025

Abstract Background Rabies virus (RABV)–derived neuronal tracing tools are extensively applied in retrograde due to their strict transsynaptic transfer property and low neurotoxicity. However, the RABV infection expression of fluorescence products would be gradually cleared while infected neurons still survive, a phenomenon known as non‐cytolytic immune clearance (NCLIC). This introduced risk loss led omission subset that should labeled, thereby interfering analysis results. Methods To compensate for problem, this study, we developed novel marker footprints (MF) mouse, involving Cre recombinase‐dependent red fluorescent reporter system systemic glycoprotein (G) ASLV‐A receptor (TVA). Using mouse model combined with well‐developed RABV‐EnvA‐ΔG‐GFP‐Cre viral tool, green‐to‐red spectral labeling strategy. Results Neurons MF could co‐labeled green from very quick tool relatively slow neuron itself, so undergoing NCLIC relabeled red. Furthermore, newly labeled other yellow temporal difference between two proteins. Conclusions is first polysynaptic strategy label using colors only one injection enabling its application recognizing sequence brain regions enhancing spatiotemporal resolution tracing.

Язык: Английский

High-volume hybridoma sequencing on the NeuroMabSeq platform enables efficient generation of recombinant monoclonal antibodies and scFvs for neuroscience research DOI Creative Commons

Keith G. Mitchell,

Belvin Gong,

Samuel S. Hunter

и другие.

Scientific Reports, Год журнала: 2023, Номер 13(1)

Опубликована: Сен. 27, 2023

The Neuroscience Monoclonal Antibody Sequencing Initiative (NeuroMabSeq) is a concerted effort to determine and make publicly available hybridoma-derived sequences of monoclonal antibodies (mAbs) valuable neuroscience research. Over 30 years research development efforts including those at the UC Davis/NIH NeuroMab Facility have resulted in generation large collection mouse mAbs validated for To enhance dissemination increase utility this resource, we applied high-throughput DNA sequencing approach immunoglobulin heavy light chain variable domain from source hybridoma cells. resultant set was made as searchable sequence database (neuromabseq.ucdavis.edu) sharing, analysis use downstream applications. We enhanced utility, transparency, reproducibility existing mAb by using these develop recombinant mAbs. This enabled their subsequent engineering into alternate forms with distinct modes detection multiplexed labeling, miniaturized single fragments or scFvs. NeuroMabSeq website corresponding antibody together serve public repository an open resource enhancing

Язык: Английский

Процитировано

9

Data science and its future in large neuroscience collaborations. DOI Creative Commons
Manuel Schottdorf, Guoqiang Yu, Edgar Y. Walker

и другие.

bioRxiv (Cold Spring Harbor Laboratory), Год журнала: 2024, Номер unknown

Опубликована: Март 25, 2024

The rise of large scientific collaborations in neuroscience requires systematic, scalable, and reliable data management. How this is best done practice remains an open question. To address this, we conducted a science survey among currently active U19 grants, funded through the NIH’s BRAIN Initiative. was answered by both liaisons Principal Investigators, speaking for ∼500 researchers across 21 nation-wide collaborations. We describe tools, technologies, methods use, identify several shortcomings current practice. Building on survey, develop plans propose policies to improve collection, publication, re-use training community.

Язык: Английский

Процитировано

3

Small data methods in omics: the power of one DOI
Kevin G. Johnston, Steven F. Grieco, Qing Nie

и другие.

Nature Methods, Год журнала: 2024, Номер 21(9), С. 1597 - 1602

Опубликована: Авг. 22, 2024

Язык: Английский

Процитировано

3

Challenges that novices face in applying core concepts to neuroscience contexts DOI Creative Commons
Keiland W Cooper,

E. Tran,

Brian S. McIntosh

и другие.

Frontiers in Education, Год журнала: 2025, Номер 10

Опубликована: Март 11, 2025

General Education (GE) courses field students from different majors with varied preconceptions of the life sciences, and neuroscience in particular. To aid instruction, outcomes, assessment students, core concepts are an effective tool that utilizes conceptual elements to promote learning transfer knowledge between disciplines. This study examined students' prior understanding two shared across biology neuroscience—structure-function relationship evolution—within student population enrolled GE courses. The structure-function concept focuses on how characteristics structures enable or constrain their function vice versa, while evolution similarities differences nervous systems organisms shaped by ancestry adaptations environments. Responses were analyzed using a deductive coding approach aimed classify responses based proficiency either within general context neuroscience-specific context. Analysis revealed majority non-biologists at start introductory course unable demonstrate comprehension (83.4%) (67.0%) Further inductive identified common themes emerged responses, revealing Structure-function Evolution major. These findings can educators informing selection background information during design presentation material positively shape these classes.

Язык: Английский

Процитировано

0

Green‐to‐red spectral labeling: A novel polysynaptic retrograde tracing strategy in the marker footprint mouse model DOI Creative Commons
Yige Song,

Jinyu Zeng,

Yunyun Han

и другие.

Animal Models and Experimental Medicine, Год журнала: 2025, Номер unknown

Опубликована: Апрель 25, 2025

Abstract Background Rabies virus (RABV)–derived neuronal tracing tools are extensively applied in retrograde due to their strict transsynaptic transfer property and low neurotoxicity. However, the RABV infection expression of fluorescence products would be gradually cleared while infected neurons still survive, a phenomenon known as non‐cytolytic immune clearance (NCLIC). This introduced risk loss led omission subset that should labeled, thereby interfering analysis results. Methods To compensate for problem, this study, we developed novel marker footprints (MF) mouse, involving Cre recombinase‐dependent red fluorescent reporter system systemic glycoprotein (G) ASLV‐A receptor (TVA). Using mouse model combined with well‐developed RABV‐EnvA‐ΔG‐GFP‐Cre viral tool, green‐to‐red spectral labeling strategy. Results Neurons MF could co‐labeled green from very quick tool relatively slow neuron itself, so undergoing NCLIC relabeled red. Furthermore, newly labeled other yellow temporal difference between two proteins. Conclusions is first polysynaptic strategy label using colors only one injection enabling its application recognizing sequence brain regions enhancing spatiotemporal resolution tracing.

Язык: Английский

Процитировано

0