PLANT PHYSIOLOGY,
Год журнала:
2024,
Номер
unknown
Опубликована: Дек. 17, 2024
Understanding
root
development
is
critical
for
enhancing
plant
growth
and
health,
advanced
technologies
are
essential
unraveling
the
complexities
of
these
processes.
In
this
review,
we
highlight
select
technological
innovations
in
study
development,
with
a
focus
on
transformative
impact
single-cell
gene
expression
analysis.
We
provide
high-level
overview
recent
advancements,
illustrating
how
RNA
sequencing
(scRNA-seq)
has
become
pivotal
tool
biology.
scRNA-seq
revolutionized
biology
by
enabling
detailed,
cell-specific
analysis
expression.
This
allowed
researchers
to
create
comprehensive
atlases,
predict
cell
map
regulatory
networks
(GRNs)
unprecedented
precision.
Complementary
technologies,
such
as
multimodal
profiling
bioinformatics,
further
enrich
our
understanding
cellular
dynamics
interactions.
Innovations
imaging
modeling,
combined
genetic
tools
like
CRISPR,
continue
deepen
knowledge
formation
function.
Moreover,
integration
biosensors
microfluidic
devices
ability
plant-microbe
interactions
phytohormone
signaling
at
high
resolution.
These
collectively
more
system
architecture
its
regulation
environmental
factors.
As
evolve,
they
promise
drive
breakthroughs
science,
substantial
implications
agriculture
sustainability.
Current Opinion in Cell Biology,
Год журнала:
2024,
Номер
91, С. 102436 - 102436
Опубликована: Окт. 3, 2024
Legume
roots
allow
intracellular
infections
of
rhizobia
to
establish
the
mutualistic
root
nodule
symbiosis.
During
this
colonization
event,
specialized
and
membrane-defined
infection
threads
provide
host-controlled
path
for
bacteria
through
multilayered
tissue
reach
a
newly
developing
organ,
nodule.
On
way,
have
propagate
transcellularly
thus
overcome
cell
wall
barriers.
This
process
not
only
requires
continuous
molecular
surveillance
invading
microbe
but
also
structural
adaptations
extracellular
matrix
components
in
spatially
confined
manner
leading
formation
novel
compartment
that
we
term
"transcellular
passage
cleft"
(TPC).
Here,
review
mechanisms
signaling
events
around
TPC
propose
step-wise
model
formation.
Journal of Experimental Botany,
Год журнала:
2024,
Номер
unknown
Опубликована: Ноя. 20, 2024
Abstract
The
extensive
use
of
nitrogen
fertilizers
has
detrimental
environmental
consequences,
and
it
is
essential
for
society
to
explore
sustainable
alternatives.
One
promising
avenue
engineering
root
nodule
symbiosis,
a
naturally
occurring
process
in
certain
plant
species
within
the
nitrogen-fixing
clade,
into
non-leguminous
crops.
Advancements
single-cell
transcriptomics
provide
unprecedented
opportunities
dissect
molecular
mechanisms
underlying
symbiosis
at
cellular
level.
This
review
summarizes
key
findings
from
studies
Medicago
truncatula,
Lotus
japonicus,
Glycine
max.
We
highlight
how
these
address
fundamental
questions
about
development
including
following
findings:
(i)
revealed
conserved
transcriptional
program
hair
cortical
cells
during
rhizobial
infection,
suggesting
common
infection
pathway
across
legume
species;
(ii)
characterization
determinate
indeterminate
nodules
using
technologies
supports
compartmentalization
fixation,
assimilation,
transport
distinct
cell
populations;
(iii)
data
have
enabled
identification
novel
genes
provided
new
approaches
prioritizing
candidate
functional
characterization;
(iv)
trajectory
inference
RNA
velocity
analyses
allowed
reconstruction
lineages
dynamic
states
symbiosis.
Frontiers in Plant Science,
Год журнала:
2024,
Номер
15
Опубликована: Дек. 11, 2024
Two
symbiotic
processes,
nodulation
and
arbuscular
mycorrhiza,
are
primarily
controlled
by
the
plant’s
need
for
nitrogen
(N)
phosphorus
(P),
respectively.
Autoregulation
of
(AON)
autoregulation
mycorrhizal
symbiosis
(AOM)
both
negatively
regulate
their
respective
processes
share
multiple
components—plants
that
make
too
many
nodules
usually
have
higher
mycorrhiza
(AM)
fungal
root
colonization.
The
protein
TML
(TOO
MUCH
LOVE)
was
shown
to
function
in
roots
maintain
susceptibly
rhizobial
infection
under
low
N
conditions
control
nodule
number
through
AON
Lotus
japonicus
.
Medicago
truncatula
has
two
sequence
homologs:
Mt
TML1
TML2.
We
report
generation
stable
single
double
mutants
harboring
allelic
variations
MtTML1
MtTML2
using
CRISPR–Cas9
targeted
mutagenesis
screening
a
transposon
library.
Plants
containing
mutations
or
TML2
produced
three
times
wild-type
plants,
whereas
plants
genes
displayed
synergistic
effect,
forming
20×
more
compared
plants.
Examination
expression
heterozygote
effects
suggests
genetic
compensation
may
play
role
observed
synergy.
with
s
only
showed
mild
increases
AM
colonization
at
later
timepoints
our
experiments,
suggesting
these
also
minor
regulation.
created
will
be
useful
tools
dissect
mechanism
action
M.
beneficial
microbes.
PLANT PHYSIOLOGY,
Год журнала:
2024,
Номер
unknown
Опубликована: Дек. 17, 2024
Understanding
root
development
is
critical
for
enhancing
plant
growth
and
health,
advanced
technologies
are
essential
unraveling
the
complexities
of
these
processes.
In
this
review,
we
highlight
select
technological
innovations
in
study
development,
with
a
focus
on
transformative
impact
single-cell
gene
expression
analysis.
We
provide
high-level
overview
recent
advancements,
illustrating
how
RNA
sequencing
(scRNA-seq)
has
become
pivotal
tool
biology.
scRNA-seq
revolutionized
biology
by
enabling
detailed,
cell-specific
analysis
expression.
This
allowed
researchers
to
create
comprehensive
atlases,
predict
cell
map
regulatory
networks
(GRNs)
unprecedented
precision.
Complementary
technologies,
such
as
multimodal
profiling
bioinformatics,
further
enrich
our
understanding
cellular
dynamics
interactions.
Innovations
imaging
modeling,
combined
genetic
tools
like
CRISPR,
continue
deepen
knowledge
formation
function.
Moreover,
integration
biosensors
microfluidic
devices
ability
plant-microbe
interactions
phytohormone
signaling
at
high
resolution.
These
collectively
more
system
architecture
its
regulation
environmental
factors.
As
evolve,
they
promise
drive
breakthroughs
science,
substantial
implications
agriculture
sustainability.