bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Окт. 31, 2024
Abstract
Tuberous
sclerosis
complex
(TSC)
is
a
multisystemic
genetic
disorder
associated
with
loss-of-function
mutations
in
the
TSC1
or
TSC2
gene,
which
lead
mTOR
pathway
hyperactivation
and
epileptogenesis.
Cortical
tubers
are
hallmark
of
TSC
represent
disorganized
cortical
structure
underlying
generation
focal
seizures.
Here,
we
report
single-nucleus
RNA
sequencing
resected
vs
matched
pediatric
controls.
Strikingly,
spite
severe
disorganization,
found
that
preserve
all
neuronal
subtypes,
even
rarest
ones.
Moreover,
showed
principal
neurons
largely
spatial
position
based
on
transcriptional
signatures.
Principal
layer
1-2
GABAergic
modulate
upper
circuits
exhibited
largest
gene
expression
changes.
Interestingly,
multiple
changes
counteracted
hyperactivation.
neuronal,
but
not
glial,
networks
massive
metabolic
reorganization
reduction
mitochondrial
respiration
concomitant
switch
to
fatty
acid
metabolism.
Finally,
show
neuron-specific
AMPA
receptor
signaling
might
underlie
epileptogenesis
could
potential
candidate
for
therapeutic
targeting.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Окт. 6, 2024
Understanding
the
computational
principles
of
brain
and
replicating
them
on
neuromorphic
hardware
modern
deep
learning
architectures
is
crucial
for
advancing
neuro-inspired
AI
(NeuroAI).
Here,
we
develop
an
experimentally-constrained
biophysical
network
model
neocortical
circuit
motifs,
focusing
layers
2-3
primary
visual
cortex
(V1).
We
investigate
role
four
major
cortical
interneuron
classes
in
a
competitive-cooperative
primitive
validate
these
motifs
implemented
soft
winner-take-all
(sWTA)
computation
gain
modulation,
signal
restoration,
context-dependent
multistability.
Using
novel
parameter
mapping
technique,
configured
IBM’s
TrueNorth
(TN)
chip
to
implement
sWTA
computations,
mirroring
biological
neural
dynamics.
Retrospectively,
observed
strong
correspondence
between
TN
parameters,
particularly
roles
key
inhibitory
neuron
classes:
Parvalbumin
(feedforward
inhibition),
Somatostatin
(feedback
VIP
(disinhibition),
LAMP5
(gain
normalization).
Moreover,
sparse
coupling
this
motif
was
also
able
simulate
two-state
state
machine
chip,
working
memory
dynamics
essential
cognitive
tasks.
Additionally,
integrating
as
preprocessing
layer
Vision
Transformer
(ViT)
enhanced
its
performance
MNIST
digit
classification
task,
demonstrating
improved
generalization
previously
unseen
data
suggesting
mechanism
akin
zero-shot
learning.
Our
approach
provides
framework
translating
brain-inspired
computations
hardware,
with
potential
applications
platforms
like
Intel’s
Loihi2
Northpole.
By
biophysically
accurate
models
advanced
techniques,
offer
comprehensive
roadmap
embedding
into
NeuroAI
systems.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Июль 18, 2024
Inhibitory
interneurons
within
cortical
layer
1
(L1-INs)
integrate
inputs
from
diverse
brain
regions
to
modulate
sensory
processing
and
plasticity,
but
the
that
recruit
these
have
not
been
identified.
Here
we
used
monosynaptic
retrograde
tracing
whole-cell
electrophysiology
characterize
thalamic
onto
two
major
subpopulations
of
L1-INs
in
mouse
auditory
cortex.
We
find
vast
majority
unexpectedly
arise
ventral
subdivision
medial
geniculate
body
(MGBv),
tonotopically-organized
primary
thalamus.
Moreover,
receive
robust
functional
MGBv
are
comparable
those
recorded
L4
excitatory
pyramidal
neurons.
Our
findings
identify
a
direct
pathway
thalamus
L1-INs,
suggesting
uniquely
positioned
conveying
precise
information
with
top-down
carrying
about
states
learned
associations.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Окт. 31, 2024
Abstract
Tuberous
sclerosis
complex
(TSC)
is
a
multisystemic
genetic
disorder
associated
with
loss-of-function
mutations
in
the
TSC1
or
TSC2
gene,
which
lead
mTOR
pathway
hyperactivation
and
epileptogenesis.
Cortical
tubers
are
hallmark
of
TSC
represent
disorganized
cortical
structure
underlying
generation
focal
seizures.
Here,
we
report
single-nucleus
RNA
sequencing
resected
vs
matched
pediatric
controls.
Strikingly,
spite
severe
disorganization,
found
that
preserve
all
neuronal
subtypes,
even
rarest
ones.
Moreover,
showed
principal
neurons
largely
spatial
position
based
on
transcriptional
signatures.
Principal
layer
1-2
GABAergic
modulate
upper
circuits
exhibited
largest
gene
expression
changes.
Interestingly,
multiple
changes
counteracted
hyperactivation.
neuronal,
but
not
glial,
networks
massive
metabolic
reorganization
reduction
mitochondrial
respiration
concomitant
switch
to
fatty
acid
metabolism.
Finally,
show
neuron-specific
AMPA
receptor
signaling
might
underlie
epileptogenesis
could
potential
candidate
for
therapeutic
targeting.