bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Ноя. 22, 2024
Understanding
how
collective
neuronal
activity
in
the
brain
orchestrates
behavior
is
a
central
question
integrative
neuroscience.
Addressing
this
requires
models
that
can
offer
unified
interpretation
of
multimodal
data.
In
study,
we
jointly
examine
video-recordings
zebrafish
larvae
freely
exploring
their
environment
and
calcium
imaging
Anterior
Rhombencephalic
Turning
Region
(ARTR)
circuit,
which
known
to
control
swimming
orientation,
recorded
vivo
under
tethered
conditions.
We
show
both
behavioral
neural
data
be
accurately
modeled
using
Hidden
Markov
Model
(HMM)
with
three
hidden
states.
context
behavior,
states
correspond
leftward,
rightward,
forward
swimming.
The
HMM
robustly
captures
key
statistical
features
motion,
including
bout-type
persistence
its
dependence
on
bath
temperature,
while
also
revealing
inter-individual
phenotypic
variability.
For
data,
left-
right-lateral
activation
ARTR
govern
selection
left
vs.
right
reorientation,
balanced
state,
likely
corresponds
state.
To
further
unify
two
analysis,
exploit
generative
nature
HMM,
sequences
generate
synthetic
trajectories
whose
properties
are
similar
Overall,
work
demonstrates
state-space
used
link
providing
insights
into
mechanisms
self-generated
action.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Июль 30, 2024
Abstract
Recent
advances
in
automated
tracking
tools
have
sparked
a
growing
interest
studying
naturalistic
behavior.
Yet,
traditional
decision-making
tasks
remain
the
norm
for
assessing
learning
behavior
neuroscience.
We
introduce
an
alternative
sequential
task
mouse
It
consists
of
open-source,
3D-printed
“lockbox”,
mechanical
riddle
that
requires
four
different
mechanisms
to
be
solved
sequence
obtain
reward.
During
task,
mice
move
around
freely,
allowing
expression
complex
behavioral
patterns.
observed
willingly
engage
and
learn
solve
it
only
few
trials.
To
analyze
how
we
recorded
their
multi-camera
setup
developed
custom
data
analysis
pipeline
automatically
detect
interactions
with
lockbox
large
corpus
video
footage
(
>
300h,
12
mice).
The
allows
us
further
delineate
why
performance
increases
over
Our
analyses
suggest
this
is
not
due
increased
interaction
time
or
acquisition
smart
solution
strategy,
but
primarily
habituation
lockbox.
Lockboxes
may
hence
promising
approach
study
both
abstract
decision
making
low-level
motor
single
can
rapidly
learned
by
mice.
Physiological Reviews,
Год журнала:
2024,
Номер
105(1), С. 315 - 381
Опубликована: Авг. 15, 2024
Parenting
behavior
comprises
a
variety
of
adult-infant
and
adult-adult
interactions
across
multiple
timescales.
The
state
transition
from
nonparent
to
parent
requires
an
extensive
reorganization
individual
priorities
physiology
is
facilitated
by
combinatorial
hormone
action
on
specific
cell
types
that
are
integrated
throughout
interconnected
brainwide
neuronal
circuits.
In
this
review,
we
take
comprehensive
approach
integrate
historical
current
literature
each
these
topics
species,
with
focus
rodents.
New
emerging
molecular,
circuit-based,
computational
technologies
have
recently
been
used
address
outstanding
gaps
in
our
framework
knowledge
infant-directed
behavior.
This
work
raising
fundamental
questions
about
the
interplay
between
instinctive
learned
components
parenting
mutual
regulation
affiliative
versus
agonistic
behaviors
health
disease.
Whenever
possible,
point
how
helped
gain
novel
insights
opened
new
avenues
research
into
neurobiology
parenting.
We
hope
review
will
serve
as
introduction
for
those
field,
resource
already
studying
parenting,
guidepost
designing
future
studies.
Communications Biology,
Год журнала:
2024,
Номер
7(1)
Опубликована: Сен. 3, 2024
Nonhuman
primates
(NHPs)
exhibit
complex
and
diverse
behavior
that
typifies
advanced
cognitive
function
social
communication,
but
quantitative
systematical
measure
of
this
natural
nonverbal
processing
has
been
a
technical
challenge.
Specifically,
method
is
required
to
automatically
segment
time
series
into
elemental
motion
motifs,
much
like
finding
meaningful
words
in
character
strings.
Here,
we
propose
solution
called
SyntacticMotionParser
(SMP),
general-purpose
unsupervised
parsing
algorithm
using
nonparametric
Bayesian
model.
Using
three-dimensional
posture-tracking
data
from
NHPs,
SMP
outputs
an
optimized
sequence
latent
motifs
classified
the
most
likely
number
states.
When
applied
behavioral
datasets
common
marmosets
rhesus
monkeys,
outperformed
conventional
posture-clustering
models
detected
set
ethograms
publicly
available
data.
also
quantified
visualized
effects
chemogenetic
neural
manipulations.
thus
potential
dramatically
improve
our
understanding
NHP
variety
contexts.
Data-driven
machine
learning
algorithm,
Syntactic
Motion
Parser,
decomposes
primate's
dynamics
its
inherent
component.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Ноя. 22, 2024
Understanding
how
collective
neuronal
activity
in
the
brain
orchestrates
behavior
is
a
central
question
integrative
neuroscience.
Addressing
this
requires
models
that
can
offer
unified
interpretation
of
multimodal
data.
In
study,
we
jointly
examine
video-recordings
zebrafish
larvae
freely
exploring
their
environment
and
calcium
imaging
Anterior
Rhombencephalic
Turning
Region
(ARTR)
circuit,
which
known
to
control
swimming
orientation,
recorded
vivo
under
tethered
conditions.
We
show
both
behavioral
neural
data
be
accurately
modeled
using
Hidden
Markov
Model
(HMM)
with
three
hidden
states.
context
behavior,
states
correspond
leftward,
rightward,
forward
swimming.
The
HMM
robustly
captures
key
statistical
features
motion,
including
bout-type
persistence
its
dependence
on
bath
temperature,
while
also
revealing
inter-individual
phenotypic
variability.
For
data,
left-
right-lateral
activation
ARTR
govern
selection
left
vs.
right
reorientation,
balanced
state,
likely
corresponds
state.
To
further
unify
two
analysis,
exploit
generative
nature
HMM,
sequences
generate
synthetic
trajectories
whose
properties
are
similar
Overall,
work
demonstrates
state-space
used
link
providing
insights
into
mechanisms
self-generated
action.