bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Дек. 15, 2024
Abstract
Convergent
antibodies
are
highly
similar
elicited
in
multiple
individuals
response
to
the
same
antigen.
provide
insight
into
shared
immunological
responses
and
show
great
promise
as
diagnostic
biomarkers.
They
have
typically
been
identified
using
methods
that
consider
amino
acid
sequence
of
third
complementarity-determining
region
(CDR3)
immunoglobulin
heavy
chain
(IgH).
In
this
study,
we
extend
definition
convergent
use
structural
information
about
three
IgH
CDR
regions
(CDR1-3).
We
benchmark
performance
both
definitions
convergence
by
their
ability
predict
disease
status
from
bulk
sequencing
data
for
two
different
diseases
(HIV
infection
food
sensitization).
predicted
outperforms
prior
approaches
prediction
sensitization
performs
on
par
HIV
status.
Additionally,
structurally
antibody
groups
driving
known
binders.
Thus,
allows
identification
antigen
specific
data.
The Journal of Allergy and Clinical Immunology In Practice,
Год журнала:
2024,
Номер
13(3), С. 594 - 609.e8
Опубликована: Дек. 12, 2024
Piperacillin-tazobactam
is
used
in
patients
with
cystic
fibrosis
to
treat
recurrent
respiratory
infections.
Exposure
associated
a
high
frequency
of
nonimmediate
hypersensitivity.
To
assess
the
applicability
lymphocyte
transformation
test
(LTT)
for
diagnosis
piperacillin
hypersensitivity
and
influence
desensitization
on
piperacillin-specific
T-cell
responses.
Study
arm
1
was
an
analysis
LTT
responses
from
58
naive/baseline
tolerant
samples
collected
over
3-year
interventional
phase.
In
study
2,
17
hypersensitive
were
recruited
LTTs
conducted
before
after
desensitization.
Clinical
reactions
both
arms
monitored
8-year
observational
period.
1,
received
611
piperacillin-tazobactam
courses
(range,
2-40;
mean
±
SD,
10.5
8.1)
during
phase;
11
developed
The
who
remained
236
period,
9
whom
Ten
phase
had
positive
whereas
one
negative.
We
recorded
136
negative
39
patients,
eight
four
LTT-positive
2
underwent
desensitization,
seven
tolerating
drug.
strength
decreased
results
minimum
14
days.
During
follow-up,
tolerated
62
through
sensitive
marker
drug
sensitization
that
could
be
inform
future
patient
management.
Desensitization
attenuation
response.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Дек. 15, 2024
Abstract
Convergent
antibodies
are
highly
similar
elicited
in
multiple
individuals
response
to
the
same
antigen.
provide
insight
into
shared
immunological
responses
and
show
great
promise
as
diagnostic
biomarkers.
They
have
typically
been
identified
using
methods
that
consider
amino
acid
sequence
of
third
complementarity-determining
region
(CDR3)
immunoglobulin
heavy
chain
(IgH).
In
this
study,
we
extend
definition
convergent
use
structural
information
about
three
IgH
CDR
regions
(CDR1-3).
We
benchmark
performance
both
definitions
convergence
by
their
ability
predict
disease
status
from
bulk
sequencing
data
for
two
different
diseases
(HIV
infection
food
sensitization).
predicted
outperforms
prior
approaches
prediction
sensitization
performs
on
par
HIV
status.
Additionally,
structurally
antibody
groups
driving
known
binders.
Thus,
allows
identification
antigen
specific
data.