Omics approaches in understanding the benefits of plant-microbe interactions

Frontiers in Microbiology, Год журнала: 2024, Номер 15

Опубликована: Май 27, 2024

Plant-microbe interactions are pivotal for ecosystem dynamics and sustainable agriculture, influenced by various factors, such as host characteristics, environmental conditions, human activities. Omics technologies, including genomics, transcriptomics, proteomics, metabolomics, have revolutionized our understanding of these interactions. Genomics elucidates key genes, transcriptomics reveals gene expression dynamics, proteomics identifies essential proteins, metabolomics profiles small molecules, thereby offering a holistic perspective. This review synthesizes diverse microbial-plant interactions, showcasing the application omics in mechanisms, nitrogen fixation, systemic resistance induction, mycorrhizal association, pathogen-host Despite challenges data integration ethical considerations, approaches promise advancements precision intervention resilient agricultural practices. Future research should address challenges, enhance technology resolution, explore epigenomics, understand plant-microbe under conditions. In conclusion, technologies hold immense optimizing strategies fortifying alliances, paving way agriculture stewardship.

Язык: Английский

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A review on plant endophytes in response to abiotic stress

Environmental Pollutants and Bioavailability, Год журнала: 2024, Номер 36(1)

Опубликована: Март 6, 2024

Endophytes, as microorganisms widely present in plants, have an important role plant growth and development. Abiotic stresses are very essential influence on Endophytes host plants diverse, however, beneficial endophytes used to make resistant abiotic stresses. This review focuses studying the regulatory roles of different under stresses, explained special pathway related mechanism heavy metal stress, such cadmium, manganese zinc stress. How do dominant respond salt heat stress affect physiological characteristics? In addition, we also summarized potential application reducing toxicity pathogens, promoting crop growth, biomedicine ecological restoration, other aspects, provide reference for further in-depth research action effective utilization endophytes.

Язык: Английский

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Why Are There So Few Basidiomycota and Basal Fungi as Endophytes? A Review

Journal of Fungi, Год журнала: 2024, Номер 10(1), С. 67 - 67

Опубликована: Янв. 15, 2024

A review of selected studies on fungal endophytes confirms the paucity Basidiomycota and basal fungi, with almost 90% attributed to Ascomycota. Reasons for low number including Chytridiomycota, Mucoromycota, Mortierellomycota, are advanced, isolation procedure media, incubation period slow growth basidiomycetes, identification non-sporulating isolates, endophyte competition, fungus–host interactions. We compare detection through culture-dependent methods culture-independent methods, role fungi senescence host plant, next-generation studies.

Язык: Английский

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Challenges in apple preservation: Fungicide resistance and emerging biocontrols

Physiological and Molecular Plant Pathology, Год журнала: 2023, Номер 129, С. 102205 - 102205

Опубликована: Дек. 16, 2023

Язык: Английский

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Distinctive features of the dynamics of photosynthetic pigment contents and the number of cultivated endophytic bacteria forms in Ribes nigrum L. leaves

POMICULTURE & SMALL FRUITS CULTURE IN RUSSIA, Год журнала: 2025, Номер 79, С. 37 - 49

Опубликована: Янв. 3, 2025

The article presents the results of studying dynamics photosynthetic pigment contents and number cultivated endophytic bacteria (EB) forms in leaves cultivars different genetic origin bred by FSBSO ARHCBAN. research was conducted 2021-2024 on blackcurrant (Ribes nigrum L.) collection plantings Kokinsky experimental station (Bryansk Oblast) department gene pool bioresources (Stupinsky District, Moscow included Barmaley, Bryansky Agat, Gamayun, Debryansk, Mif. Weather conditions during growing season were found to have a signifi cant effect content EB leaves. On average, over four-year period, Agat determined largest EB, i. e., up 107,823 CFU/g. cultivar characterized most stable abundance indicators Barmaley responsive this indicator. their predictably positively correlated with sunny days, as well average values daytime nighttime temperatures spring fall. Except for Mif, all responded negatively or weakly amount precipitation daily mean temperature. Debryansk be unresponsive weather factors, which may associated lowest annual its (70,713 CFU/g). high chlorophyll indicate possible role stimulating synthesis pigments

Язык: Английский

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Differential responses of Bradyrhizobium sp. SUTN9-2 to plant extracts and implications for endophytic interactions within different host plants

Scientific Reports, Год журнала: 2025, Номер 15(1)

Опубликована: Янв. 25, 2025

Bradyrhizobium sp. strain SUTN9-2 demonstrates cell enlargement, increased DNA content, and efficient nitrogen fixation in response to rice (Oryza sativa) extract. This is attributed the interaction between plant's cationic antimicrobial peptides (CAMPs) BacA-like transporter (BclA), similar bacteroid legume nodules. The present study reveals that can also establish functional endophytic interactions with chili (Capsicum annuum) tomato (Solanum lycopersicum) plants. When exposed extracts from tomato, exhibits elongation, polyploidy, reduced viability, effects being less pronounced for Transcriptomic cytological analyses revealed genes associated CAMP resistance, metabolism, fixation, defense responses, secretion systems were upregulated, while related cycle certain CAMP-resistance mechanisms downregulated, particularly suggests likely evolves resistance against CAMPs found rice, chili, plants through involving protease-chaperone DegP, AcrAB-TolC multidrug efflux pumps, polysaccharides. These facilitate efflux, degradation, formation of protective barriers resist CAMPs. Such adaptations enable persist colonize host despite pressures, influencing its differentiation, during various plant hosts.

Язык: Английский

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Endophytes as Permanent or Temporal Inhabitants of Different Ecological Niches in Sustainable Agriculture

Applied Sciences, Год журнала: 2025, Номер 15(3), С. 1253 - 1253

Опубликована: Янв. 26, 2025

Local adaptation of plants to environmental conditions is gaining attention, particularly in the context climatic change and microbiota that are associated with it. It should be noted endophytes play a large role shaping plants. These microorganisms reside within plant tissues without causing any apparent harm their host. also highlighted an essential ecosystems by contributing health through multiple mechanisms. We suggest affect some animals, as they used ecological niche which animals thrive. Thus, we analyzed this aspect persistent but impermanent inhabitants various niches. Therefore, aim current review present knowledge (from last 10 years) on endophytes, applicability agriculture affecting animals. focused bioproducts biofertilizers containing indirectly connected agrobiotechnology, legal marketing these products, impact

Язык: Английский

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Biocontrol activities and mechanisms of endophytic Bacillus licheniformis SY41 against Atractylodes chinensis root rot

Scientia Horticulturae, Год журнала: 2025, Номер 341, С. 113995 - 113995

Опубликована: Фев. 1, 2025

Язык: Английский

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Endophytic Fungi as Promising Sources of Antiviral Compounds for Plant Virus Pathogens

Опубликована: Янв. 1, 2025

Язык: Английский

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Two Antarctic endophytic bacteria of Colobanthus quitensis show functional and genomic characteristics potentially responsible for plant growth promotion and cold tolerance

Polar Biology, Год журнала: 2025, Номер 48(2)

Опубликована: Фев. 13, 2025

Язык: Английский

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