Investigation of Some Metabolic Enzyme Inhibition Properties of Novel Chalcone‐Cu Complexes DOI
Rüstem Ebiri, Muhammet Turgut, Derya Aktaş Anıl

и другие.

ChemistrySelect, Год журнала: 2024, Номер 9(27)

Опубликована: Июль 12, 2024

Abstract Fourteen novel Chalcone‐Cu complexes were effectively synthesized in this work. The newly assessed for their effects on human carbonic anhydrase isoenzymes I and II, acetylcholinesterase enzymes, antioxidant activity. intricate compounds exhibited Ki values ranging from 41.65–190.42 nM against hCA I, 15.79–259.07 14.36–175.73 AChE enzymes. These demonstrated potent inhibitory profiles the specified metabolic surpassing of acetazolamide (for II) tacrine AChE). properties using DPPH ABTS radical scavenging assays, revealing that had moderate to high efficacy neutralizing free radicals. All underwent molecular docking experiments. Compounds 14 , 22 23 yielded highest scores. Compound a score −6.414 kcal/mol hCAI, whereas compound attained −6.697 II. most favorable −9.645 AChE. acquired results have potential help towards development new drugs containing Cu complex structures treatment prevalent ailments such as glaucoma Alzheimer's diseases.

Язык: Английский

Synthesis of Sorafenib−Ruthenium Complexes, Investigation of Biological Activities and Applications in Drug Delivery Systems as an Anticancer Agent DOI Creative Commons
Belma Zengin Kurt, Dilek Öztürk Civelek,

Elmas Begüm Çakmak

и другие.

Journal of Medicinal Chemistry, Год журнала: 2024, Номер 67(6), С. 4463 - 4482

Опубликована: Март 12, 2024

Sorafenib, a multiple kinase inhibitor, is widely used as first-line treatment for hepatocellular carcinoma. However, there need more effective alternatives when sorafenib proves insufficient. In this study, we aimed to design structure that surpasses sorafenib's efficacy, leading us synthesize sorafenib–ruthenium complexes the first time and investigate their properties. Our results indicate exhibit superior epidermal growth factor receptor (EGFR) inhibition compared alone. Interestingly, among these complexes, Ru3S demonstrated high activity against various cancer cell lines including sorafenib-resistant HepG2 cells while exhibiting significantly lower cytotoxicity than in healthy lines. Further evaluation of cycle, apoptosis, antiangiogenic effects, molecular docking, dynamics studies revealed holds great potential drug candidate. Additionally, free was encapsulated into polymeric micelles M1, enhanced on observed. Collectively, findings position promising candidate EGFR warrant further exploration development purposes.

Язык: Английский

Процитировано

14

Binding Mechanism of Inhibitors to BRD4 and BRD9 Decoded by Multiple Independent Molecular Dynamics Simulations and Deep Learning DOI Creative Commons
Jian Wang,

Wanchun Yang,

Lu Zhao

и другие.

Molecules, Год журнала: 2024, Номер 29(8), С. 1857 - 1857

Опубликована: Апрель 19, 2024

Bromodomain 4 and 9 (BRD4 BRD9) have been regarded as important targets of drug designs in regard to the treatment multiple diseases. In our current study, molecular dynamics (MD) simulations, deep learning (DL) binding free energy calculations are integrated probe modes three inhibitors (H1B, JQ1 TVU) BRD4 BRD9. The MD trajectory-based DL successfully identify significant functional function domains, such BC-loop ZA-loop. information from post-processing analysis simulations indicates that inhibitor highly influences structural flexibility dynamic behavior results MM-GBSA not only suggest ability H1B, TVU BRD9 stronger than BRD4, but they also verify van der Walls interactions primary forces responsible for binding. hot spots revealed by residue-based estimation provide target sites design This work is anticipated useful theoretical aids development selective over BRD family members.

Язык: Английский

Процитировано

13

4‐Furfuryloxymethyl‐1,2,3‐triazol‐1‐yl‐acetohydrazide Hybrids as Cholinesterase and Carbonic Anhydrase Inhibitors: Synthesis, Characterization and Comprehensive Biological Activity Studies DOI
Halil Şenol

ChemistrySelect, Год журнала: 2024, Номер 9(6)

Опубликована: Фев. 6, 2024

Abstract This study focused on the synthesis and evaluation of biological activity ten novel acetohydrazide hybrid derivatives, having furfuryloxy‐1,2,3‐triazole ring. All target compounds were tested in vitro silico for their inhibitory potential against key enzymes: hAChE, hBChE, hCAI, hCAII, all involved significant physiological processes. Remarkably, two compounds, namely (E)‐2‐(4‐((furan‐2‐ylmethoxy)methyl)‐1H‐1,2,3‐triazol‐1‐yl)‐N′‐(4‐hydroxy‐3‐methoxybenzylidene)acetohydrazide (9) (E)‐N′‐(4‐chlorobenzylidene)‐2‐(4‐((furan‐2‐ylmethoxy)methyl)‐1H‐1,2,3‐triazol‐1‐yl)acetohydrazide (11) , exhibited strong activity. Compound 9 emerged as top‐performing inhibitor both hAChE (IC 50 0.23 μM) hBChE 0.74 μM). Additionally, 11 displayed potent effects hCAI with IC values 0.18 μM 0.15 μM, respectively. Furthermore, studies provided valuable insights into interaction mechanisms stability ligand‐protein complexes. demonstrated binding scores −12.063 kcal/mol −9.359 while substantial −7.040 −8.216 hCAII. In conclusion, they stand out promising inhibitors hCAII enzymes. Their activity, supported by low values, indicated to inhibit enzymes associated neurological metabolic

Язык: Английский

Процитировано

10

New tetrahydro-isoquinoline derivatives as cholinesterase and α-glycosidase inhibitors: Synthesis, characterization, molecular docking & dynamics, ADME prediction, in vitro cytotoxicity and enzyme inhibition studies DOI

İbrahim G. Mamedov,

Halil Şenol, Farid N. Naghiyev

и другие.

Journal of Molecular Liquids, Год журнала: 2024, Номер 404, С. 125006 - 125006

Опубликована: Май 14, 2024

Язык: Английский

Процитировано

10

Exploring highly selective polymethoxy fenamate isosteres as novel anti-prostate cancer agents: Synthesis, biological activity, molecular docking, molecular dynamics, and ADME studies DOI
Feyzi Sinan Tokalı, Halil Şenol, Şeyma Ateşoğlu

и другие.

Journal of Molecular Structure, Год журнала: 2024, Номер 1319, С. 139519 - 139519

Опубликована: Авг. 2, 2024

Язык: Английский

Процитировано

8

Cytotoxic meroterpenoids from brown alga Stypopodium schimperi (Kützing) Verlaque & Boudouresque with comprehensive molecular docking & dynamics and ADME studies DOI

Özlem Demirkıran,

Ebru Erol, Halil Şenol

и другие.

Process Biochemistry, Год журнала: 2023, Номер 136, С. 90 - 108

Опубликована: Дек. 2, 2023

Язык: Английский

Процитировано

21

Synthesis of pyrrole-heterocyclic derivatives as anti-Alzheimer and antidiabetic candidates: An in vitro-in silico study DOI
О. В. Петрова, Denis N. Tomilin, Halil Şenol

и другие.

Journal of Molecular Structure, Год журнала: 2024, Номер 1315, С. 138998 - 138998

Опубликована: Июнь 14, 2024

Язык: Английский

Процитировано

7

Novel complex compounds of nickel with 3-(1-phenyl-2,3-dimethyl-pyrazolone-5)azopentadione-2,4: synthesis, NBO analysis, reactivity descriptors and in silico and in vitro anti-cancer and bioactivity studies DOI

Shahla Tahirli,

Fargana Aliyeva,

Halil Şenol

и другие.

Journal of Biomolecular Structure and Dynamics, Год журнала: 2024, Номер unknown, С. 1 - 25

Опубликована: Янв. 31, 2024

A synthesized azo compound based on 4-amino antipyrine and its complexes with Ni(II) in solution solid phase is reported. The structures of these compounds have been testified by IR NMR spectroscopy. combined experimental theoretical approach was used. To study the structure properties compound, as well possible complex formation Ni(II), ab initio quantum-chemical calculations were carried out using Hartree-Fock (HF) method 6-31 G basis set electron density functional theory (DFT) hybrid three-parameter potential B3LYP extended 6-311++G(d,p) taking into account polarization diffuse functions for all atoms. geometric, energy, electronic parameters calculated analyzed. HOMO-LUMO energy gap has to determine chemical activity. Both had effective inhibition against butyrylcholinesterase acetylcholinesterase. IC50 values found 19.43 27.08 µM AChE, 2.37 7.40 BChE, respectively. For anticancer outcome, high doses E1 inhibited viability about 40–45%, while this rate around 65–70% E2 at same doses. Anticholinesterase also evaluated silico techniques. show strong binding VEGFR1, exhibiting superior inhibitory activity hAChE hBChE through shorter stronger interactions. MD simulations suggest that forms more stable compared E1, making it a promising candidate further exploration anticholinesterase therapies.

Язык: Английский

Процитировано

6

Anti-Obesity Therapeutic Targets Studied In Silico and In Vivo: A Systematic Review DOI Open Access
Wendjilla Fortunato de Medeiros, Ana Francisca Teixeira Gomes, Ana Aguiar

и другие.

International Journal of Molecular Sciences, Год журнала: 2024, Номер 25(9), С. 4699 - 4699

Опубликована: Апрель 25, 2024

In the age of information technology and additional computational search tools software available, this systematic review aimed to identify potential therapeutic targets for obesity, evaluated in silico subsequently validated vivo. The was initially guided by research question “What have been used analysis treatment obesity?” structured based on acronym PECo (P, problem; E, exposure; Co, context). protocol formulated registered PROSPERO (CRD42022353808) accordance with Preferred Reporting Items Checklist Systematic Review Meta-Analysis Protocols (PRISMA-P), PRISMA followed review. studies were selected according eligibility criteria, aligned PECo, following databases: PubMed, ScienceDirect, Scopus, Web Science, BVS, EMBASE. strategy yielded 1142 articles, from which, evaluation 12 included Only seven these articles allowed identification both vivo reassessed targets. Among targets, five exclusively experimental, one theoretical, presented an experimental portion a obtained modeling. predominant methodology molecular docking most studied target Human Pancreatic Lipase (HPL) (n = 4). lack methodological details resulted more than 50% papers being categorized “unclear risk bias” across eight out eleven criteria. From current review, it seems evident that integrating methodologies into drug exploration new agents provides important tool, given ongoing challenges controlling obesity.

Язык: Английский

Процитировано

6

Exploring anticancer properties of new triazole-linked benzenesulfonamide derivatives against colorectal carcinoma: Synthesis, cytotoxicity, and in silico insights DOI
Belma Zengin Kurt, Özge Özmen, Dilek Öztürk Civelek

и другие.

Bioorganic & Medicinal Chemistry, Год журнала: 2025, Номер 119, С. 118060 - 118060

Опубликована: Янв. 5, 2025

Язык: Английский

Процитировано

0