Journal of Molecular Modeling, Год журнала: 2024, Номер 30(11)
Опубликована: Окт. 2, 2024
Язык: Английский
Journal of Molecular Modeling, Год журнала: 2024, Номер 30(11)
Опубликована: Окт. 2, 2024
Язык: Английский
Heliyon, Год журнала: 2024, Номер 10(7), С. e28623 - e28623
Опубликована: Март 26, 2024
The (E)-4-((4-hydroxy-3-methoxy-5-nitrobenzylidene) amino) pyrimidin-2(1H)-one (C5NV) was synthesized from cytosine and 5-nitrovanilline by simple straightforward condensation reaction. structural characteristics of the compound determined optimized WB97XD/cc-pVDZ basis set. vibrational frequencies were computed subsequently compared to experimental frequencies. We investiated electronic properties in gas solvent phases using time-dependent density functional theory (TD-DFT) approach, them values. fluorescence study showed three different wavelengths indicating nature optical material properties. Frontier molecular orbital (FMO) electrostatic potential (MEP) analyses conducted for title compound, electron localized functions (ELF) locators (LOL) used identify positions delocalized atoms. Non-covalent interactions (H-bond interactions) investigated reduced gradients (RDGs). objective determine physical, chemical, biological C5NV. docking between C5NV 2XNF protein, its lowest binding energy score is −7.92 kcal/mol.
Язык: Английский
Процитировано
14Journal of Molecular Structure, Год журнала: 2024, Номер 1303, С. 137570 - 137570
Опубликована: Янв. 14, 2024
Язык: Английский
Процитировано
12Journal of Molecular Liquids, Год журнала: 2024, Номер 400, С. 124570 - 124570
Опубликована: Март 25, 2024
Язык: Английский
Процитировано
12Journal of Biomolecular Structure and Dynamics, Год журнала: 2024, Номер unknown, С. 1 - 16
Опубликована: Апрель 24, 2024
The novel Schiff's base (CS6) was synthesized and confirmed by various studies. B3LYP/cc-pVDZ basis set used for theoretical study the results indicated that both experimental studies correlated well. interaction energy of CS6-water complex calculated using local decomposition analysis found to be -7.28 kcal/mol. TD-TFT method calculation electronic absorption spectrum. This observed wavelength simulated in spectra were almost similar. electrophilic nucleophilic attacking sites titled compound identified FMO MEP highest stabilization (30.19 kcal/mol) formed LP (2) O24 anti-bonding σ*(C18-C19) NBO study. localized delocalized electrons ELF LOL hydrogen bond as well physical chemical properties CS6 it showed a moderate similarity drugs. docking dehydro-L-gulonate decarboxylase inhibitor (1Q6O) could interact with binding -5.26 kcal/mol.Communicated Ramaswamy H. Sarma.
Язык: Английский
Процитировано
12Journal of Molecular Structure, Год журнала: 2024, Номер 1318, С. 139346 - 139346
Опубликована: Июль 17, 2024
Язык: Английский
Процитировано
9Journal of Molecular Liquids, Год журнала: 2024, Номер 415, С. 126404 - 126404
Опубликована: Ноя. 3, 2024
Язык: Английский
Процитировано
9Journal of Molecular Structure, Год журнала: 2024, Номер 1323, С. 140711 - 140711
Опубликована: Ноя. 10, 2024
Язык: Английский
Процитировано
8Journal of Molecular Structure, Год журнала: 2024, Номер 1315, С. 138808 - 138808
Опубликована: Май 31, 2024
Язык: Английский
Процитировано
3Molecular Physics, Год журнала: 2024, Номер unknown
Опубликована: Окт. 29, 2024
The study extensively examined N,N'-(4-methyl-1,3-phenylene)bis(1-(2,4-dichlorophenyl)methanimine) (6D). Advanced spectroscopic techniques, including IR, Raman, NMR, and UV-VIS spectroscopies, were employed to analyse the molecule. Schiff base was ultimately confirmed using NMR spectrum analysis. revealed a notable bathochromic change in compound, indicating their electronic transitions. By HOMO–LUMO bond gap titled compound reactivity sites identified. 6D band is 3.70 eV. Various wave function investigations like MESP, HOMO–LUMO, RDG, ELF, LOL, ALIE conducted elucidate distribution of charge, providing valuable insights into behaviour molecules. biological probability synthesised assessed docking study. Using MEP investigations, we confirm nucleophilic electrophilic attacking sites. In study, protein Bovine cytochrome bc1 complex stigma Tellin bound (PDB ID–1PP9) downloaded. identified most stable minimum binding energy –6.26 kcal/mol.
Язык: Английский
Процитировано
3ChemistrySelect, Год журнала: 2024, Номер 9(17)
Опубликована: Апрель 26, 2024
Abstract Bromouracil derivatives are synthesized using an environmentally acceptable bromination protocol involving NaBr as a promoter. A minimum of 1.5 equivalent was required to reach the maximum yield. The reactions were conducted in acidic medium presence H 2 O under ambient conditions. We successfully ten novel 5‐bromouracil available our laboratory and characterized them various spectroscopic methods such 1 H‐NMR, 13 C‐NMR, SC‐XRD. All screened for anti‐bacterial activities against gram‐positive gram‐negative bacteria. In particular, compounds 5‐bromo‐4‐chloro‐6‐methylpyrimidin‐2‐amine 5‐bromo‐6‐chloropyrimidine‐2,4‐diamine exhibited prominent antibacterial activity E. coli with IC 50 values ~9.8 ~5.7 μg/mL. structural‐activity relationship revealed that −NH group both bromo affirms improving activity. Molecular docking studies also supported experimental result showed good binding energy −4.4 ( ) −4.8 b kcal/mol primase.
Язык: Английский
Процитировано
2