bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2022,
Номер
unknown
Опубликована: Авг. 26, 2022
Abstract
Precise
targeting
of
deep
brain
structures
in
humans
and
large
animal
models
has
been
a
challenge
for
neuroscientists.
Conventional
protocols
used
typically
require
access
chambers
which
are
prone
to
infection
involve
assembly
implantation
complex
microdrives
semi-chronic
applications.
Here
we
present
methodology
improving
subcortical
animals
such
as
macaque
monkeys,
using
image
guided
neuronavigation.
Design
custom
cranial
caps
allowed
incorporation
stable
fiducial
markers,
required
increased
accuracy
neuronavigation
procedures,
resulting
an
average
error
1.6
mm
over
three
implantations.
Incorporation
anchor
bolt
chambers,
commonly
human
neurosurgery,
provided
minimally
invasive
entrance
the
parenchyma,
allowing
chronic
recordings.
By
leveraging
existing
3D
printing
technology,
fabricated
bolt-mounted
microdrive
Our
protocol
leverages
commercially
available
tools
implantation,
decreases
risk
complications
open
craniotomies,
improves
precision
electrode
implantations
models.
Imaging Neuroscience,
Год журнала:
2024,
Номер
2, С. 1 - 23
Опубликована: Янв. 1, 2024
Abstract
Initiatives
towards
acquiring
large-scale
neuroimaging
data
in
non-human
primates
promise
improving
translational
neuroscience
and
cross-species
comparisons.
Crucial
among
these
efforts
is
the
need
to
expand
sample
sizes
while
reducing
impact
of
anesthesia
on
functional
properties
brain
networks.
Yet,
effects
primate
networks
remain
unclear.
Here,
we
demonstrate
using
magnetic
resonance
imaging
(fMRI)
at
9.4
tesla
that
isoflurane
induces
a
variety
states
marmoset
with
dramatically
altered
connectivity
profiles.
As
an
alternative,
recommend
continuous
infusion
sedative
medetomidine,
supplemented
low
concentration
isoflurane.
Using
this
protocol
eight
marmosets,
observed
robust
visual
activation
during
flickering
light
stimulation
identified
resting-state
similar
awake
state.
In
contrast,
alone
led
suppressed
absence
awake-like
network
patterns.
Comparing
graph-theoretical
approach,
confirmed
structure
preserved
under
our
proposed
but
lost
levels
greater
than
1%.
We
believe
widespread
adoption
will
be
step
advancing
initiatives
neuroimaging.
To
promote
collaborative
use
resources,
openly
share
datasets
(https://zenodo.org/records/11118775).
Nature Communications,
Год журнала:
2024,
Номер
15(1)
Опубликована: Авг. 20, 2024
Sensorimotor
learning
requires
reorganization
of
neuronal
activity
in
the
premotor
cortex
(PM)
and
primary
motor
(M1).
To
reveal
PM-
M1-specific
a
primate,
we
conducted
calcium
imaging
common
marmosets
while
they
learned
two-target
reaching
(pull/push)
task
after
mastering
one-target
(pull)
task.
Throughout
task,
dorsorostral
PM
(PMdr)
showed
peak
earlier
than
dorsocaudal
(PMdc)
M1.
During
learning,
reaction
time
pull
trials
increased
correlated
strongly
with
timing
PMdr
activity.
decreasing
representation
newly
introduced
(push)
movement,
whereas
PMdc
M1
maintained
high
push
movements.
Many
task-related
neurons
exhibited
strong
preference
to
either
movement
direction.
dynamically
switched
their
preferred
direction
depending
on
performance
early
stage,
stably
retained
similarity
between
neighbors.
These
results
suggest
that
primate
sensorimotor
dynamic
directional
tuning
converts
association
formed
stable
specific
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2025,
Номер
unknown
Опубликована: Апрель 17, 2025
Abstract
The
primate
brain
possesses
unique
physiological
and
developmental
features
whose
systematic
investigation
is
hampered
by
a
paucity
of
transgenic
germline
models
tools.
Here,
we
present
minimally
invasive
method
to
introduce
transgenes
widely
across
the
cerebral
cortex
using
ultrasound-guided
fetal
intracerebroventricular
viral
injections
(FIVI).
This
technique
enables
rapid-onset
long-lasting
transgene
expression
following
delivery
recombinant
adeno-associated
viruses
(rAAVs).
By
adjusting
gestational
timing
injections,
serotypes,
transcriptional
regulatory
elements,
rAAV
FIVI
allows
for
targeting
specific
cell
populations.
We
demonstrate
versatility
this
through
restricted
laminar
in
cortex,
Cre-dependent
neurons,
CRISPR-based
gene
editing,
labeling
peripheral
somatosensory
retinal
pathways.
mimicking
key
desirable
models,
efficient
targeted
transfer
into
opens
new
avenues
experimental
translational
neuroscience
lifespan.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2025,
Номер
unknown
Опубликована: Апрель 20, 2025
Abstract
Functional
magnetic
resonance
imaging
(fMRI)
of
awake
macaque
monkeys
holds
promise
for
advancing
our
understanding
primate
brain
organization,
including
humans.
However,
estimating
functional
connectivity
in
animals
is
challenging
due
to
the
limited
duration
sessions
and
relatively
low
sensitivity
neural
activity.
To
overcome
these
challenges,
we
developed
a
24-channel
3T
receive
radiofrequency
(RF)
coil
optimized
parallel
macaques.
This
enabled
acquisition
multiband
GRAPPA-accelerated
ferumoxytol-weighted
resting-state
fMRI.
The
Human
Connectome
Project-style
data
processing
pipelines
were
adapted
address
unique
preprocessing
demands
cerebral
blood
volume-weighted
(CBVw)
imaging,
motion
correction,
functional-to-structural
image
co-registration,
training
multi-run
independent
component
analysis-based
X-noiseifier
(ICA-FIX)
classifier
removal
structured
artifacts.
Our
CBVw
fMRI
approach
resulted
an
elevated
contrast-to-noise
ratio
compared
oxygenation
level
dependent
(BOLD)
anesthetized
artifacts
still
contributed
more
variance
timeseries
than
By
applying
ICA-FIX
classifier,
achieved
highly
reproducible
parcellated
at
single-subject
level.
At
group-level,
identified
dense
networks
with
spatial
features
homologous
those
observed
RF
coil,
protocols,
analysis
are
publicly
available,
providing
broader
scientific
community
tools
leverage
advances
further
research.
Brain Structure and Function,
Год журнала:
2022,
Номер
228(5), С. 1107 - 1123
Опубликована: Ноя. 18, 2022
Night
monkeys
(Aotus)
are
the
only
genus
of
within
Simian
lineage
that
successfully
occupy
a
nocturnal
environmental
niche.
Their
behavior
is
supported
by
their
sensory
organs'
distinctive
morphological
features;
however,
little
known
about
evolutionary
adaptations
in
regions
cerebral
cortex.
Here,
we
investigate
this
question
exploring
cortical
organization
night
using
high-resolution
in-vivo
brain
MRI
and
comparative
cortical-surface
T1w/T2w
myeloarchitectonic
mapping.
Our
results
show
monkey
cortex
has
qualitatively
similar
but
quantitatively
different
pattern
myelin
compared
to
diurnal
macaque
marmoset
monkeys.
its
gradient
allowed
us
parcellate
high
areas,
including
middle
temporal
complex
(MT
+)
auditory
cortex,
low-myelin
area,
Brodmann
area
7
(BA7)
three
species,
despite
species
differences
convolutions.
Relative
total
those
MT
+
significantly
larger
than
monkeys,
whereas
BA7
occupies
fraction
sheet
all
species.
We
propose
selective
expansion
areas
dedicated
visual
motion
processing
may
reflect
environment.
Progress in Neurobiology,
Год журнала:
2024,
Номер
240, С. 102657 - 102657
Опубликована: Авг. 3, 2024
Accurate
definition
of
the
borders
cortical
visual
areas
is
essential
for
study
neuronal
processes
leading
to
perception.
However,
data
used
areal
boundaries
have
suffered
from
issues
related
resolution,
uniform
coverage,
or
suitability
objective
analysis,
ambiguity.
Here,
we
present
a
novel
approach
that
combines
widefield
optical
imaging,
presentation
naturalistic
movies,
and
encoding
model
objectively
define
in
primate
extrastriate
cortex.
We
applied
this
method
test
conflicting
hypotheses
about
third-tier
cortex,
where
remained
controversial.
demonstrate
pronounced
tuning
preferences
areas,
an
organizational
structure
which
dorsomedial
area
(DM)
contains
representations
both
upper
lower
contralateral
quadrants,
located
immediate
anterior
V2.
High-density
electrophysiological
recordings
with
Neuropixels
probe
confirm
these
findings.
Our
encoding-model
offers
powerful,
way
disambiguate
boundaries.
NeuroImage,
Год журнала:
2023,
Номер
278, С. 120283 - 120283
Опубликована: Июль 27, 2023
Humans
are
known
to
have
significant
and
consistent
differences
in
thickness
throughout
the
cortex,
with
thick
outer
gyral
folds
thin
inner
sulcal
folds.
Our
previous
work
has
suggested
a
mechanical
basis
for
this
pattern,
forces
generated
during
cortical
folding
leading
gyri
sulci,
shown
that
varies
along
gyral-sulcal
spectrum
humans.
While
other
primate
species
expected
exhibit
similar
patterns
of
thickness,
it
is
currently
unknown
how
these
scale
across
different
sizes,
forms,
foldedness.
Among
primates,
brains
vary
enormously
from
roughly
size
grape
grapefruit,
nearly
smooth
dramatically
folded;
these,
human
largest
most
folded.
These
variations
form
make
comparative
neuroanatomy
rich
resource
investigating
common
trends
transcend
between
species.
In
study,
we
examine
12
order
cover
wide
range
sizes
investigate
scaling
their
relative
surface
geometry.
The
were
selected
due
public
availability
either
reconstructed
surfaces
and/or
population
templates.
After
obtaining
or
reconstructing
3D
publicly
available
neuroimaging
data,
used
our
surface-based
computational
pipeline
(https://github.com/mholla/curveball)
analyze
respect
(total
area),
geometry
(i.e.
curvature,
shape,
depth),
foldedness
(gyrification).
all
species,
found
spectrum,
convex
shapes
thicker
than
concave
saddle
between.
Furthermore,
saw
an
increasing
difference
sulci
as
brain
increases.
results
suggest
systematic
mechanism
relating
local
Finally,
morphometry
data
future
research
neuroanatomy.
Journal of Neuroscience Methods,
Год журнала:
2023,
Номер
397, С. 109948 - 109948
Опубликована: Авг. 10, 2023
Accurate
targeting
of
brain
structures
for
in-vivo
electrophysiological
recordings
is
essential
basic
as
well
clinical
neuroscience
research.
Although
methodologies
precise
and
recording
from
the
cortical
surface
are
abundant,
such
protocols
scarce
deep
structures.We
have
incorporated
stable
fiducial
markers
within
a
custom
cranial
cap
improved
image-guided
neuronavigation
subcortical
in
macaque
monkeys.
Anchor
bolt
chambers
allowed
minimally
invasive
entrance
into
chronic
recordings.
A
3D-printed
microdrive
semi-chronic
applications.We
achieved
an
average
Euclidean
error
1.6
mm
radial
1.2
over
three
implantations
two
animals.
Chronic
extracellular
neuronal
activity,
with
single-neuron
activity
examples
shown
one
monkey.Traditional
stereotactic
methods
ignore
individual
anatomical
variability.
Our
approach
allows
flexible,
subject-specific
surgical
plan
errors
lower
than
what
reported
humans,
equal
to
or
animal
models
using
similar
methods.
Utilizing
anchor
chamber
reduced
craniotomy
size
needed
electrode
implantation,
compared
conventional
large
access
which
prone
infection.
Installation
in-house,
3D-printed,
screw-to-mount
mechanical
contrast
existing
requiring
fabrication,
assembly,
installation
complex
parts.Leveraging
commercially
available
tools
our
protocol
decreases
risk
infection
open
craniotomies,
improves
accuracy
models.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2023,
Номер
unknown
Опубликована: Сен. 14, 2023
Summary
Sensorimotor
learning
requires
reorganization
of
neuronal
activity
in
the
premotor
cortex
(PM)
and
primary
motor
(M1).
However,
how
PM-
M1-specific
occurs
primates
remains
unclear.
We
conducted
calcium
imaging
these
areas
common
marmosets
while
they
learned
a
two-target
reaching
(pull/push)
task.
Throughout
learning,
dorsorostral
PM
(PMdr)
showed
peak
earlier
than
dorsocaudal
(PMdc)
M1.
PMdr
decreased
representation
newly
introduced
(push)
movement,
whereas
PMdc
M1
maintained
high
representation.
Many
task-related
neurons
exhibited
strong
preference
to
either
movement
direction.
dynamically
switched
their
preferred
direction,
stably
retained
Differences
direction
between
adjacent
increased
during
learning.
These
results
suggest
that
primate
sensorimotor
dynamic
converts
cognitive
signals
stable
specific