Neuron,
Год журнала:
2023,
Номер
112(2), С. 264 - 276.e6
Опубликована: Ноя. 8, 2023
Neurotransmission
in
the
brain
is
unreliable,
suggesting
that
high-frequency
spike
bursts
rather
than
individual
spikes
carry
neural
code.
For
instance,
cortical
pyramidal
neurons
rely
on
memory
formation.
Protein
synthesis
another
key
factor
long-term
synaptic
plasticity
and
learning
but
widely
considered
unnecessary
for
transmission.
Here,
however,
we
show
burst
neurotransmission
at
synapses
between
neocortical
layer
5
cells
depends
axonal
protein
linked
to
presynaptic
NMDA
receptors
mTOR.
We
localized
axons
with
laser
axotomy
puromycylation
live
imaging.
whole-cell
recorded
connected
reveal
how
translation
sustained
readily
releasable
vesicle
pool
size
replenishment
rate.
imaged
found
sparsely
docked
RNA
granules,
synapse-specific
regulation.
In
agreement,
boosted
onto
excitatory
not
inhibitory
basket
or
Martinotti
cells.
Local
mRNA
thus
a
hitherto
unappreciated
principle
sustaining
coding
specific
synapse
types.
Molecular Systems Biology,
Год журнала:
2019,
Номер
15(12)
Опубликована: Дек. 1, 2019
Recent
developments
in
proteomics
have
enabled
signaling
studies
where
>
10,000
phosphosites
can
be
routinely
identified
and
quantified.
Yet,
current
analyses
are
limited
throughput,
reproducibility,
robustness,
hampering
experiments
that
involve
multiple
perturbations,
such
as
those
needed
to
map
kinase-substrate
relationships,
capture
pathway
crosstalks,
network
inference
analysis.
To
address
these
challenges,
we
introduce
rapid-robotic
phosphoproteomics
(R2-P2),
an
end-to-end
automated
method
uses
magnetic
particles
process
protein
extracts
deliver
mass
spectrometry-ready
phosphopeptides.
R2-P2
is
rapid,
robust,
versatile,
high-throughput.
showcase
the
method,
applied
it,
combination
with
data-independent
acquisition
spectrometry,
study
dynamics
mitogen-activated
kinase
(MAPK)
yeast.
Our
results
reveal
broad
specific
events
along
mating,
high-osmolarity
glycerol,
invasive
growth
branches
of
MAPK
pathway,
robust
phosphorylation
downstream
regulatory
proteins
transcription
factors.
facilitates
large-scale
involving
hundreds
perturbations
opening
door
systems-level
aiming
complexity.
Cell Reports,
Год журнала:
2019,
Номер
29(11), С. 3605 - 3619.e10
Опубликована: Дек. 1, 2019
Ribosome
assembly
occurs
mainly
in
the
nucleolus,
yet
recent
studies
have
revealed
robust
enrichment
and
translation
of
mRNAs
encoding
many
ribosomal
proteins
(RPs)
axons,
far
away
from
neuronal
cell
bodies.
Here,
we
report
a
physical
functional
interaction
between
locally
synthesized
RPs
ribosomes
axon.
We
show
that
axonal
RP
is
regulated
through
sequence
motif,
CUIC,
forms
an
RNA-loop
structure
region
immediately
upstream
initiation
codon.
Using
imaging
subcellular
proteomics
techniques,
axons
join
nucleolus-independent
fashion.
Inhibition
CUIC-regulated
decreases
local
activity
reduces
axon
branching
developing
brain,
revealing
physiological
relevance
synthesis
vivo.
These
results
suggest
supplies
cytoplasmic
to
maintain/modify
function
nucleolus
neurons.
Molecular Cell,
Год журнала:
2018,
Номер
73(3), С. 474 - 489.e5
Опубликована: Дек. 27, 2018
Local
translation
is
rapidly
regulated
by
extrinsic
signals
during
neural
wiring,
but
its
control
mechanisms
remain
elusive.
Here
we
show
that
the
extracellular
cue
Sema3A
induces
an
initial
burst
in
local
precisely
controls
phosphorylation
of
initiation
factor
eIF2α
via
unfolded
protein
response
(UPR)
kinase
PERK.
Strikingly,
contrast
to
canonical
UPR
signaling,
Sema3A-induced
bypasses
global
translational
repression
and
underlies
increase
through
differential
activity
eIF2B
mediated
phosphatase
1.
Ultrasensitive
proteomics
analysis
axons
reveals
75
proteins
translationally
controlled
Sema3A-p-eIF2α
pathway.
These
include
proteostasis-
actin
cytoskeleton-related
not
stress
markers.
Finally,
PERK
signaling
needed
for
directional
axon
migration
visual
pathway
development
vivo.
Thus,
our
findings
reveal
a
noncanonical
eIF2
selective
changes
required
wiring.
Traffic,
Год журнала:
2019,
Номер
20(9), С. 639 - 649
Опубликована: Июнь 17, 2019
Abstract
Membrane‐less
organelles,
because
of
their
capacity
to
dynamically,
selectively
and
reversibly
concentrate
molecules,
are
very
well
adapted
for
local
information
processing
rapid
response
environmental
fluctuations.
These
features
particularly
important
in
the
context
neuronal
cells,
where
synapse‐specific
activation,
or
localized
extracellular
cues,
induce
signaling
events
restricted
specialized
axonal
dendritic
subcompartments.
Neuronal
ribonucleoprotein
(RNP)
particles,
granules,
nonmembrane
bound
macromolecular
condensates
that
specific
sets
mRNAs
regulatory
proteins,
promoting
long‐distance
transport
axons
dendrites.
RNP
granules
also
have
a
dual
function
regulating
translation
associated
mRNAs:
while
preventing
mRNA
at
rest,
they
fuel
protein
synthesis
upon
activation.
As
revealed
by
recent
work,
reversible
switches
between
these
two
functional
modes
triggered
modifications
networks
interactions
underlying
granule
assembly.
Such
flexible
properties
come
with
cost,
as
prone
transition
into
pathological
aggregates
mutations,
aging,
cellular
stresses,
further
emphasizing
need
better
understand
mechanistic
principles
governing
dynamic
assembly
regulation
living
systems.
Physiological Reviews,
Год журнала:
2020,
Номер
101(3), С. 1309 - 1370
Опубликована: Окт. 1, 2020
Posttranscriptional
gene
expression
including
splicing,
RNA
transport,
translation,
and
decay
provides
an
important
regulatory
layer
in
many
if
not
all
molecular
pathways.
Research
the
last
decades
has
positioned
RNA-binding
proteins
(RBPs)
right
center
of
posttranscriptional
regulation.
Here,
we
propose
interdependent
networks
RBPs
to
regulate
complex
pathways
within
central
nervous
system
(CNS).
These
are
involved
multiple
aspects
neuronal
development
functioning,
higher
cognition.
Therefore,
it
is
sufficient
unravel
individual
contribution
a
single
RBP
its
consequences
but
rather
study
understand
tight
interplay
between
different
RBPs.
In
this
review,
summarize
recent
findings
field
biology
discuss
Second,
emphasize
underlying
dynamics
network
how
might
key
processes
such
as
neurogenesis,
synaptic
transmission,
plasticity.
Importantly,
envision
that
dysfunction
specific
could
lead
perturbation
network.
This
would
have
direct
indirect
(compensatory)
effects
mRNA
binding
translational
control
leading
global
changes
cellular
programs
general
plasticity
particular.
focus
on
cause
neuropsychiatric
neurodegenerative
disorders.
Based
findings,
alterations
entire
account
for
phenotypic
dysfunctions
observed
diseases
neurodegeneration,
epilepsy,
autism
spectrum