The Genome-Wide Identification, Characterization, and Expression Patterns of the Auxin-Responsive PbGH3 Gene Family Reveal Its Crucial Role in Organ Development DOI Creative Commons
Baopeng Ding,

Chaohui Hu,

Qing Chen

и другие.

Horticulturae, Год журнала: 2024, Номер 10(10), С. 1094 - 1094

Опубликована: Окт. 14, 2024

The regulation of vital plant activities by hormones is governed a family macromolecular peptides referred to as GH3 genes. This work analyzed the expression patterns genes in pear tissues using transcriptome data and bioinformatics analysis. In Bai Li genome, total 18 PbGH3 were identified. Comparative evolutionary studies have shown strong association between AtGH3 class I II proteins. role growth hormone was revealed gene ontology (GO) promoter region addition, although certain exhibited tissue-specific sepals, majority had ubiquitous across all tissues. Bioinformatics suggest that pears may controlling abscission fruit’s sepals. sheds light on fruit sepal shedding process inspire further research.

Язык: Английский

ncRNAs in plant development and stress responses DOI
Sarvajeet Singh Gill, Nafees A. Khan, Niraj Agarwala

и другие.

Plant Physiology and Biochemistry, Год журнала: 2024, Номер 214, С. 108950 - 108950

Опубликована: Июль 18, 2024

Процитировано

4

Multifunctional Role of Cytokinin in Horticultural Crops DOI Open Access
Shahid Hussain, Jingjing Chang, Jing Li

и другие.

International Journal of Molecular Sciences, Год журнала: 2025, Номер 26(3), С. 1037 - 1037

Опубликована: Янв. 25, 2025

Cytokinins (CKs) are a class of phytohormones identified in the early 1960s and mainly responsible for stimulating cell division. Following discovery, research to help understand pluralistic roles CKs plant growth stress biology increased. With their fascinating ability, serve as an important element regulating defense–growth trade-off. Herein, we demonstrate how CK fine-tuning organogenesis different parts horticultural plants is discussed. CK’s role tailoring reproductive (flowering, sex differentiation, fruit set, attributes) has been presented. An extensive explanation CK-mediated response crops abiotic (temperature, drought, salinity) biotic stresses (fungal, bacterial, nematodes) provided. Finally, posit unexplored highlight gaps worth addressing.

Язык: Английский

Процитировано

0

Genome wide identification and characterization of Bax inhibitor-1 gene family in cucumber (Cucumis sativus) under biotic and abiotic stress DOI Creative Commons

Samia Anwar,

Riffat Siddique,

Shakeel Ahmad

и другие.

BMC Genomics, Год журнала: 2024, Номер 25(1)

Опубликована: Ноя. 4, 2024

In plants, the BAX inhibitor-1 (BI-1) gene plays a crucial part in controlling cell death under stress conditions. This mechanism of Programmed Cell Death (PCD) is genetically regulated and for elimination unwanted or damaged cells controlled manner, which essential normal development tissue maintenance. A study on cucumber identified characterized five BI-1 genes: CsBI1, CsBI2, CsBI3, CsBI4, CsBI5. These genes share conserved domains, indicating common evolutionary history function. Physicochemical analysis revealed their molecular weights isoelectric points, while subcellular localization showed presence different cellular compartments. The phylogenetic highlighted relationships with related crops. Chromosomal distribution synteny suggested segmental tandem duplications within family. Protein-protein interaction extensive interactions other proteins. Cis-regulatory elements promoter regions provided insights into potential functions transcriptional regulation. miRNAs diverse regulatory mechanisms, including mRNA cleavage translational inhibition. CsBI4 CsBI5 exhibit elevated expression levels during cold stress, suggesting vital involvement plant defense mechanisms. application chitosan oligosaccharides externally confirms distinct patterns. qRT-PCR upregulation CsBI ToLCNDV-infected to mitigate biotic abiotic stresses. comprehensive genome-wide exploration provides opportunities cold-tolerant virus-resistant variants by traditional breeding gene.

Язык: Английский

Процитировано

1

Transcriptome Wide Identification and Expression Analysis Revealed BhTALE Gene Family Regulates Wax Gourd (Benincasa hispida) Response to Low Calcium and Magnesium Stress DOI Creative Commons
Shahid Hussain, Jingjing Chang, Jing Li

и другие.

Horticulturae, Год журнала: 2024, Номер 10(10), С. 1083 - 1083

Опубликована: Окт. 9, 2024

The three-amino-loop-extension (TALE) family involves key transcription factors vital for maintaining different aspects of growth including leaf, flower, and fruit development responses to stressful stimulus. Thus far, a deep understanding the TALE gene in wax gourd subjected low calcium magnesium stress has been missing. Here, we isolated 24 BhTALE genes from genome database. Comprehensive bioinformatic analysis, evolutionary tree, structures, conserved motifs, chemical properties, provide structural functional insights into family. Gene ontology (GO) analysis unveils their involvement responses. Promoter indicates that hormones stresses can influence expression genes. Tissue-specific under showed were more active leaves roots. Notably, BhTALE7, BhTALE10, BhTALE14 expressed differentially applications. Similarly, induced pattern BhTALE4 was recorded roots Our findings underscore pivotal role dealing with gourd.

Язык: Английский

Процитировано

0

The Genome-Wide Identification, Characterization, and Expression Patterns of the Auxin-Responsive PbGH3 Gene Family Reveal Its Crucial Role in Organ Development DOI Creative Commons
Baopeng Ding,

Chaohui Hu,

Qing Chen

и другие.

Horticulturae, Год журнала: 2024, Номер 10(10), С. 1094 - 1094

Опубликована: Окт. 14, 2024

The regulation of vital plant activities by hormones is governed a family macromolecular peptides referred to as GH3 genes. This work analyzed the expression patterns genes in pear tissues using transcriptome data and bioinformatics analysis. In Bai Li genome, total 18 PbGH3 were identified. Comparative evolutionary studies have shown strong association between AtGH3 class I II proteins. role growth hormone was revealed gene ontology (GO) promoter region addition, although certain exhibited tissue-specific sepals, majority had ubiquitous across all tissues. Bioinformatics suggest that pears may controlling abscission fruit’s sepals. sheds light on fruit sepal shedding process inspire further research.

Язык: Английский

Процитировано

0