FEMS Microbiology Ecology,
Год журнала:
2023,
Номер
99(11)
Опубликована: Окт. 10, 2023
Abstract
The
root-associated
soil
microbiome
contributes
immensely
to
support
plant
health
and
performance
against
abiotic
biotic
stressors.
Understanding
the
processes
that
shape
microbial
assembly
in
soils
is
of
interest
ecology
research.
In
this
study,
37
species
were
grown
same
mixture
for
10
months,
whereupon
was
assessed
using
amplicon
sequencing.
From
this,
contribution
direct
indirect
effects
on
assessed.
Plant
plant-induced
changes
physicochemistry
most
significant
factors
accounted
bacterial
fungal
community
variation.
Considering
all
plants
starting
mixture,
our
results
suggest
plants,
part,
their
via
physicochemistry.
With
increase
phylogenetic
ranking
from
class,
we
observed
declines
degree
variation
attributed
origin.
That
is,
plant-microbe
associations
unique
each
species,
but
between
not
important.
We
a
large
residual
(>
65%)
by
any
plant-related
factors,
which
may
be
random
assembly.
Journal of Fungi,
Год журнала:
2022,
Номер
8(8), С. 807 - 807
Опубликована: Июль 30, 2022
Soil
fungi
play
an
integral
and
essential
role
in
maintaining
soil
ecosystem
functions.
The
understanding
of
altitude
variations
their
drivers
fungal
community
composition
diversity
remains
relatively
unclear.
Mountains
provide
open,
natural
platform
for
studying
how
the
responds
to
climatic
variability
at
a
short
distance.
Using
Illumina
MiSeq
high-throughput
sequencing
technique,
we
examined
among
seven
vegetation
types
(dry
valley
shrub,
valley-mountain
ecotone
broadleaved
mixed
forest,
subalpine
coniferous-broadleaved
coniferous
alpine
shrub
meadow,
meadow)
along
2582
m
gradient
alpine-gorge
region
on
eastern
Qinghai-Tibetan
Plateau.
Ascomycota
(47.72%),
Basidiomycota
(36.58%),
Mortierellomycota
(12.14%)
were
top
three
dominant
phyla
all
samples.
differed
significantly
gradients.
α-diversity
total
symbiotic
had
distinct
hollow
pattern,
while
saprophytic
pathogenic
showed
no
obvious
pattern
β-diversity
fungi,
was
derived
mainly
from
species
turnover
processes
exhibited
significant
distance-decay
pattern.
properties
explained
31.27-34.91%
variation
(total
trophic
modes)
gradients,
effects
nutrients
varied
by
modes.
pH
main
factor
affecting
components
affected
geographic
distance,
those
only
properties.
This
study
deepens
our
knowledge
regarding
diversity,
confirms
that
vary
modes
gradients
region.
Biological reviews/Biological reviews of the Cambridge Philosophical Society,
Год журнала:
2025,
Номер
unknown
Опубликована: Май 14, 2025
ABSTRACT
Biological
diversity
in
mountain
ecosystems
has
been
increasingly
studied
over
the
last
decade.
This
is
also
case
for
soils,
but
no
study
to
date
provided
an
overall
synthesis
of
current
state
knowledge.
Here
we
fill
this
gap
with
a
first
global
analysis
published
research
on
cryptogams,
microorganisms,
and
fauna
soils
above
treeline,
structured
Based
corpus
almost
1400
publications
expertise
37
soil
scientists
worldwide,
summarise
what
known
about
distribution
patterns
each
these
organismal
groups,
specifically
along
elevation,
provide
overview
available
knowledge
drivers
explaining
their
changes.
In
particular,
document
elevation‐dependent
decrease
faunal
while
cryptogams
there
initial
increase
followed
by
towards
nival
belt.
Thus,
our
data
confirm
key
role
that
elevation
plays
shaping
biodiversity
organisms
soils.
The
response
prokaryote
turn,
was
more
diverse,
whereas
fungal
appeared
be
substantially
influenced
plants.
As
far
as
available,
describe
characteristics,
adaptations,
functions
species,
despite
lack
ecological
information
uncultivated
majority
prokaryotes,
fungi,
protists,
illustrate
remarkable
unique
life
forms
histories
encountered
alpine
By
applying
rule‐
well
pattern‐based
literature‐mining
approaches
semi‐quantitative
analyses,
identified
hotspots
European
Alps
Central
Asia
revealed
significant
gaps
taxonomic
coverage,
particularly
among
biocrusts,
fauna.
We
further
report
thematic
priorities
treeline
identify
unanswered
questions.
Building
upon
outcomes
synthesis,
conclude
set
opportunities
worldwide.
Soils
fulfil
critical
make
essential
contributions
land.
Accordingly,
seizing
closing
appears
crucial
enable
science‐based
decision
making
regions
formulating
laws
guidelines
support
conservation
targets.
Functional Ecology,
Год журнала:
2023,
Номер
37(7), С. 2014 - 2028
Опубликована: Июнь 6, 2023
Abstract
Although
microbial
communities
play
an
important
role
in
explaining
plant
litter
decomposition
rates,
whether
and
how
chemistry
may
alter
catabolic
capacities
of
soil
remains
poorly
studied.
During
a
1‐year
experiment
12
herbaceous
species
with
contrasting
chemistry,
we
examined
the
effect
type
(roots
vs.
leaves)
chemical
traits
on
resulting
capacity
to
degrade
wide
range
carbon
substrates
variable
complexity
(MicroResp™
method).
Litter
impacted
both
total
activity
as
well
specific
communities.
In
early
stages
was
mainly
influenced
by
amount
C
N
leachates,
N,
P
Mg,
then,
later,
lignin
concentrations.
Some
could
also
be
related
initial
chemistry.
Overall,
trait
effects
decreased
over
time
relative
importance
shifted
during
process.
Our
results
highlight
that
is
strong
driver
decomposers
and,
while
its
fades
time,
it
substantial
throughout
These
long‐lasting
suggest
persistent
control
ecosystems
recurrent
production.
Soil
activities
were
driven
broadly
same
across
leaf
root
litters.
Synthesis
.
Such
represent
indirect
Disentangling
this
overlooked
represents
next
challenge.
We
argue
such
research
line
should
open
ground‐breaking
perspectives
for
reconsidering
our
current
understanding
mechanistic
links
between
rate.
Read
free
Plain
Language
Summary
article
Journal
blog.
Geoderma,
Год журнала:
2023,
Номер
433, С. 116459 - 116459
Опубликована: Апрель 5, 2023
The
molecular
diversity
of
soil
organic
matter
(SOM)
is
considered
to
be
a
critical
factor
influencing
carbon
(SOC)
persistence,
and
found
show
positive
relationship
with
SOC
in
many
upland
soils
relatively
low
concentrations.
However,
the
SOM
diversity-SOC
remains
under-investigated
high-SOC
such
as
wetlands,
which
exhibit
divergent
accumulation
mechanisms
compared
may
induce
contrasting
shifts
composition
during
drainage-induced
changes.
Here
we
utilized
three
wetlands
(i.e.,
two
fens
bog)
that
encompassed
wide
range
experienced
decades
artificial
drainage
investigate
after
drainage.
was
assessed
based
on
pyrolysis
products
using
pyrolysis–gas
chromatography-mass
spectrometry,
its
factors
(including
plant
inputs,
minerals,
extracellular
enzyme
activity,
etc.)
were
evaluated.
We
observed
responses
long-term
investigated
wetlands.
While
increased
concentration
low-SOC
≤
60
mg
g−1
soil)
fen
drainage,
it
did
not
change
>
regardless
variations.
inputs
(e.g.,
root
mass)
drove
these
microbial
processing
rather
than
dominated
increases
diversity,
thereby
resulting
decoupling
soils.
These
findings
suggest
had
non-linear
In
organic-rich
peatlands,
increase
contrast
Our
study
provides
novel,
diversity-based
perspective
understanding
wetland
stability
context
caused
by
increasing
human
activity
and/or
climate
Within
a
landscape,
multiple
habitats
exist
for
soil
microbial
communities.
But
how
these
shape
community
composition
requires
an
understanding
of
the
way
in
which
diversity
is
impacted
across
broad
range
spatial
scales.
Mountain
ecosystems
are
excellent
systems
to
study
communities,
because
multitude
climate
and
variables
change
within
relatively
small
distance.
We
investigated
structure
bulk
rhizosphere
soils
beneath
three
plant
species,
Vaccinium
myrtillus
,
Juniperus
communis
Picea
abies
that
local
communities
along
elevation
gradient
French
Alps.
examined
impact
climate,
properties,
root
chemical
morphological
traits
had
on
α‐
β‐diversities.
The
most
abundant
bacterial
phyla
detected
both
were
Proteobacteria,
Actinobacteria,
Acidobacteria
Verrucomicrobia.
Along
gradient,
did
not
display
clear
distribution
pattern
between
soils.
For
fungi,
dominant
Ascomycota
Basidiomycota,
contrasting
patterns
found
Overall,
fungal
α‐diversity
responded
differently
as
well
compartments
(bulk
versus
soil),
revealing
no
significant
any
structuring
but
increasing
compartment
P.
just
below
treeline.
Changes
β‐diversity
with
related
mostly
physical
properties.
Bacterial
more
species
identity,
vegetation
belowground
compared
whilst
opposite
was
soil.
Our
results
highlight
environmental
changes
at
landscape
scale
(e.g.
associated
elevation,
properties
or
climate),
significantly
refines
via
niche.