Oxford University Press eBooks,
Год журнала:
2025,
Номер
unknown, С. 243 - 279
Опубликована: Апрель 1, 2025
Abstract
This
case
study
illustrates
the
EP
approach
for
successful
IDE.
The
two
scientific
communities
involved
are
immunology
and
epidemiology.
I
show
that,
late-stage
work-in-progress
models
of
COVID-19,
coherence
requirements
bridging
satisfied,
while
participants
also
tend
to
have
associated
pro-social
attitudes.
Section
7.1
describes
each
community’s
social
epistemic
organization,
using
EP/EPM
framework
from
Part
I.
7.2
presents
an
explanatory
model
each:
SARS-CoV-2
infection
immune
response,
epidemiology
guide
COVID-19
vaccine
distribution
policy.
7.3
works
through
a
relation
between
these
models,
arguing
that
all
likely
satisfied
in
this
case.
IDE
yields
insights
interest
philosophers,
scientists,
(potentially)
general
public
(Section
7.4).
7.5
concludes,
recapping
method
results
study.
Cell,
Год журнала:
2023,
Номер
186(17), С. 3548 - 3557
Опубликована: Авг. 1, 2023
A
human
embryo's
legal
definition
and
its
entitlement
to
protection
vary
greatly
worldwide.
Recently,
pluripotent
stem
cells
have
been
used
form
in
vitro
models
of
early
embryos
that
challenged
definitions
raised
questions
regarding
their
usage.
In
this
light,
we
propose
a
refined
an
embryo,
suggest
"tipping
points"
for
when
embryo
could
eventually
be
afforded
similar
embryos,
then
revisit
basic
ethical
principles
might
help
draft
roadmap
the
gradual,
justified
usage
manner
aims
maximize
benefits
society.
Nature Reviews Genetics,
Год журнала:
2024,
Номер
unknown
Опубликована: Авг. 12, 2024
The
DNA
methylation
field
has
matured
from
a
phase
of
discovery
and
genomic
characterization
to
one
seeking
deeper
functional
understanding
how
this
modification
contributes
development,
ageing
disease.
In
particular,
the
past
decade
seen
many
exciting
mechanistic
discoveries
that
have
substantially
expanded
our
appreciation
for
generic,
evolutionarily
ancient
can
be
incorporated
into
robust
epigenetic
codes.
Here,
we
summarize
current
distinct
landscapes
emerge
over
mammalian
lifespan
discuss
they
interact
with
other
regulatory
layers
support
diverse
functions.
We
then
review
rising
interest
in
alternative
patterns
found
during
senescence
somatic
transition
cancer.
Alongside
advancements
single-cell
long-read
sequencing
technologies,
collective
insights
made
across
these
fields
offer
new
opportunities
connect
biochemical
genetic
features
cell
physiology,
developmental
potential
phenotype.
Review,
Smith
et
al.
describe
development
within
key
disease
states,
as
well
different
methyltransferases
interface
histone
modifications
proteins
create
maintain
them.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2021,
Номер
unknown
Опубликована: Май 7, 2021
Summary
Stem
cell-based
embryo
models
offer
unprecedented
experimental
tools
for
studying
early
human
development.
The
usefulness
of
hinges
on
their
molecular,
cellular
and
structural
fidelities
to
in
vivo
counterparts.
To
authenticate
models,
single-cell
RNA-sequencing
has
been
utilised
unbiased
transcriptional
profiling.
However,
a
well-organised
integrated
dataset,
serving
as
universal
reference
benchmarking
remains
unavailable.
Herein,
we
developed
such
reference,
through
integration
six
published
datasets
covering
developmental
stages
from
the
zygote
gastrula.
Lineage
annotations
are
contrasted
validated
with
available
non-human
primate
datasets.
Using
stabilised
UMAP
constructed
web
tool,
where
query
can
be
projected
annotated
predicted
cell
identities.
this
examined
several
recent
highlighting
risk
misannotation
when
relevant
references
lacking.
Stem
cell-based
embryo
models
offer
unprecedented
experimental
tools
for
studying
early
human
development.
The
usefulness
of
hinges
on
their
molecular,
cellular
and
structural
fidelities
to
in
vivo
counterparts.
To
authenticate
models,
single-cell
RNA
sequencing
has
been
utilized
unbiased
transcriptional
profiling.
However,
an
organized
integrated
RNA-sequencing
dataset,
serving
as
a
universal
reference
benchmarking
remains
unavailable.
Here
we
developed
such
through
the
integration
six
published
datasets
covering
development
from
zygote
gastrula.
Lineage
annotations
are
contrasted
validated
with
available
nonhuman
primate
datasets.
Using
stabilized
Uniform
Manifold
Approximation
Projection,
constructed
embryogenesis
prediction
tool,
where
query
can
be
projected
annotated
predicted
cell
identities.
this
examined
highlighting
risk
misannotation
when
relevant
references
not
authentication.
Nature Communications,
Год журнала:
2025,
Номер
16(1)
Опубликована: Янв. 28, 2025
Abstract
Blastoids—blastocyst-like
structures
created
in
vitro—emerge
as
a
valuable
model
for
early
embryonic
development
research.
Non-human
primates
stem
cell-derived
blastoids
are
an
ethically
viable
alternative
to
human
counterparts,
yet
the
low
formation
efficiency
of
monkey
blastoid
cavities,
typically
below
30%,
has
limited
their
utility.
Prior
research
predominantly
utilized
cells.
In
this
work,
we
demonstrate
efficient
generation
from
induced
pluripotent
cells
and
somatic
cell
nuclear
transfer
derived
aged
monkeys,
achieving
80%
efficiency.
We
also
introduce
hydrogel-based
microfluidics
platform
scalable
reproducible
production
size-adjustable,
biodegradable
capsules,
providing
stable
3D
structure
mechanical
protection.
This
advancement
high-efficiency,
capsules
reprogrammed
significantly
enhances
study
holds
promise
regenerative
medicine.
ABSTRACT
Pluripotency,
the
capacity
to
generate
all
cells
of
body,
is
a
defining
property
transient
population
epiblast
found
in
pre-,
peri-
and
post-implantation
mammalian
embryos.
As
development
progresses,
undergo
dynamic
transitions
pluripotency
states,
concurrent
with
specification
extra-embryonic
embryonic
lineages.
Recently,
stem
cell-based
models
pre-
human
have
been
developed
using
that
capture
key
properties
at
different
developmental
stages.
Here,
we
review
early
primate
development,
comparing
states
vivo
cultured
pluripotent
representative
these
states.
We
consider
how
status
starting
influences
embryo
and,
turn,
what
can
learn
about
epiblast.
Finally,
discuss
limitations
questions
arising
from
pioneering
studies
this
emerging
field.
Cell,
Год журнала:
2024,
Номер
187(15), С. 4010 - 4029.e16
Опубликована: Июнь 24, 2024
Mammalian
blastocyst
formation
involves
the
specification
of
trophectoderm
followed
by
differentiation
inner
cell
mass
into
embryonic
epiblast
and
extra-embryonic
primitive
endoderm
(PrE).
During
this
time,
embryo
maintains
a
window
plasticity
can
redirect
its
cellular
fate
when
challenged
experimentally.
In
context,
we
found
that
PrE
alone
was
sufficient
to
regenerate
complete
continue
post-implantation
development.
We
identify
an
in
vitro
population
similar
early
vivo
exhibits
same
potency
form
stem
cell-based
models,
termed
blastoids.
Commitment
is
suppressed
JAK/STAT
signaling,
collaborating
with
OCT4
sustained
expression
subset
pluripotency-related
transcription
factors
safeguard
enhancer
landscape
permissive
for
multi-lineage
differentiation.
Our
observations
support
notion
factor
persistence
underlies
regulative
development
highlight
importance
perturbed
Cell-cell
interactions
govern
differentiation
and
cell
competition
in
pluripotent
cells
during
early
development,
but
the
investigation
of
such
processes
is
hindered
by
a
lack
efficient
analysis
tools.
Here,
we
introduce
SyNPL:
clonal
stem
lines
that
employ
optimised
Synthetic
Notch
(SynNotch)
technology
to
report
cell-cell
between
engineered
'sender'
'receiver'
cultured
chimaeric
mouse
embryos.
A
modular
design
makes
it
straightforward
adapt
system
for
programming
decisions
non-cell-autonomously
receiver
response
direct
contact
with
sender
cells.
We
demonstrate
utility
this
enforcing
neuronal
at
boundary
two
populations.
In
summary,
provide
new
adaptation
SynNotch
could
be
used
identify
profile
changes
gene
or
protein
expression
result
from
defined
populations
culture
embryos,
can
customised
generate
synthetic
patterning
fate
decisions.