Protein-protein
interaction
(PPI)
modulation
is
a
promising
approach
in
drug
discovery
with
the
potential
to
expand
'druggable'
proteome
and
develop
new
therapeutic
strategies.
While
there
have
been
significant
advancements
methodologies
for
developing
PPI
inhibitors,
relative
scarcity
of
literature
describing
'bottom-up'
development
stabilizers
(Molecular
Glues).
The
hub
protein
14-3-3
its
interactome
provide
an
excellent
platform
exploring
conceptual
approaches
modulation,
including
evolution
chemical
matter
Molecular
Glues.
In
this
study,
we
employed
fragment
extension
strategy
discover
complex
Estrogen
Receptor
alpha-derived
peptide
(ERα).
A
focused
library
analogues
derived
from
amidine-substituted
thiophene
enhanced
affinity
14-3-3/ERα
up
6.2-fold.
Structure-activity
relationship
(SAR)
analysis
underscored
importance
newly
added,
aromatic
side
chain
certain
degree
rigidity.
X-ray
structural
revealed
unique
intermolecular
π-π
stacking
binding
mode
most
active
analogues,
resulting
simultaneous
two
molecules
pocket.
Notably,
analogue
11
displayed
selective
stabilization
complex.
Cellular & Molecular Biology Letters,
Год журнала:
2024,
Номер
29(1)
Опубликована: Май 2, 2024
Abstract
Background
Endometrial
cancer
(EC)
is
one
of
the
most
common
gynecological
cancers.
Herein,
we
aimed
to
define
role
specific
myosin
family
members
in
EC
because
this
protein
involved
progression
various
Methods
Bioinformatics
analyses
were
performed
reveal
patients’
prognosis-associated
genes
patients
with
EC.
Furthermore,
colony
formation,
immunofluorescence,
cell
counting
kit
8,
wound
healing,
and
transwell
assays
as
well
coimmunoprecipitation,
cycloheximide
chase,
luciferase
reporter,
cellular
thermal
shift
functionally
mechanistically
analyze
human
samples,
lines,
a
mouse
model,
respectively.
Results
Machine
learning
techniques
identified
MYH14,
member
family,
gene
bioinformatics
based
on
public
databases
showed
that
MYH14
was
associated
chemoresistance.
Moreover,
immunohistochemistry
validated
upregulation
cases
compared
normal
controls
confirmed
an
independent
unfavorable
prognostic
indicator
impaired
sensitivity
carboplatin,
paclitaxel,
progesterone,
increased
proliferation
metastasis
The
mechanistic
study
interacted
MYH9
GSK3β-mediated
β-catenin
ubiquitination
degradation,
thus
facilitating
Wnt/β-catenin
signaling
pathway
epithelial–mesenchymal
transition.
Sesamolin,
natural
compound
extracted
from
Sesamum
indicum
(L.),
directly
targeted
attenuated
progression.
Additionally,
disrupted
interplay
between
repressed
MYH9-regulated
signaling.
vivo
further
verified
sesamolin
therapeutic
drug
without
side
effects.
Conclusions
independently
responsible
for
poor
overall
survival
time
patients,
it
augmented
by
activating
Targeting
sesamolin,
cytotoxicity-based
approach,
can
be
applied
synergistically
chemotherapy
endocrine
therapy
eventually
mitigate
development.
This
emphasizes
potential
target
valuable
therapy.
Graphical
Drug Discovery Today,
Год журнала:
2024,
Номер
29(7), С. 104027 - 104027
Опубликована: Май 17, 2024
Various
analytical
technologies
have
been
developed
for
the
study
of
target-ligand
interactions.
The
combination
these
gives
pivotal
information
on
binding
mechanism,
kinetics,
affinity,
residence
time,
and
changes
in
molecular
structures.
Mass
spectrometry
(MS)
offers
structural
information,
enabling
identification
quantification
Surface
plasmon
resonance
(SPR)
provides
kinetic
interaction
real
time.
coupling
MS
SPR
complements
each
other
studies
Over
last
two
decades,
capabilities
added
values
SPR-MS
reported.
This
review
summarizes
highlights
benefits,
applications,
potential
further
research
approach.
Journal of Medicinal Chemistry,
Год журнала:
2025,
Номер
68(3), С. 2095 - 2104
Опубликована: Янв. 29, 2025
Data
collected
from
scholars
across
twenty-three
countries
over
the
past
decade
(2010-2019)
reveals
a
40%
decrease
in
financial
support
for
medicinal
chemistry
projects.
The
decline
is
especially
notable
among
projects
focused
on
small
organic
molecules.
This
drop
grants
indicates
troubling
trend
that
could
jeopardize
future
drug
development
by
undermining
research
this
crucial
field.
reduction
funding
not
only
affects
ongoing
but
also
threatens
education
and
training
of
chemists,
potentially
leading
to
shortage
skilled
professionals
pharmaceutical
industry.
To
counteract
negative
trend,
it
imperative
agencies,
sector,
government
bodies
take
immediate
action.
Strengthening
essential
sustain
innovation
ensure
continued
advancement
as
vital
academic
practical
discipline.
Chemical Reviews,
Год журнала:
2025,
Номер
unknown
Опубликована: Март 5, 2025
There
are
many
highly
validated
cancer
targets
that
difficult
or
impossible
to
drug
due
the
absence
of
suitable
pockets
can
bind
small
molecules.
Fragment-based
methods
have
been
shown
be
a
useful
approach
for
identifying
ligands
proteins
were
previously
thought
undruggable.
In
this
review,
I
will
give
an
overview
fragment-based
ligand
discovery
and
provide
examples
from
our
own
work
on
how
used
discover
high
affinity
challenging
targets.
Carbon
dots
(CDs)
are
a
type
of
carbon-based
nanoparticle
(NP)
that
have
risen
in
popularity
due
to
their
unique
tuneable
physicochemical
and
optical
properties.
Nature Communications,
Год журнала:
2025,
Номер
16(1)
Опубликована: Май 6, 2025
Abstract
Fis1-mediated
mitochondrial
localization
of
Drp1
and
excessive
fission
occur
in
human
pathologies
associated
with
oxidative
stress.
However,
it
is
not
known
how
Fis1
detects
stress
what
structural
changes
enable
recruitment
Drp1.
We
find
that
conformational
change
involving
α1
helix
exposes
its
only
cysteine,
Cys41.
In
the
presence
stress,
exposed
Cys41
activated
forms
a
disulfide
bridge
covalent
homodimers
cause
increased
through
to
mitochondria.
Our
discovery
small
molecule,
SP11,
binds
by
engaging
Cys41,
data
from
genetically
engineered
cell
lines
lacking
strongly
suggest
role
homodimerization
mitochondria
fission.
The
structure
Fis1-SP11
complex
further
confirms
these
insights
related
being
sensor
for
Importantly,
SP11
preserves
integrity
function
cells
during
thus
may
serve
as
candidate
molecule
development
treatment
diseases
underlying
fragmentation
dysfunction.
Chemical Reviews,
Год журнала:
2025,
Номер
unknown
Опубликована: Май 27, 2025
Undruggable
targets
are
those
of
therapeutical
significance
but
challenging
for
conventional
drug
design
approaches.
Such
often
exhibit
unique
features,
including
highly
dynamic
structures,
a
lack
well-defined
ligand-binding
pockets,
the
presence
conserved
active
sites,
and
functional
modulation
by
protein-protein
interactions.
Recent
advances
in
computational
simulations
artificial
intelligence
have
revolutionized
landscape,
giving
rise
to
innovative
strategies
overcoming
these
obstacles.
In
this
review,
we
highlight
latest
progress
approaches
against
undruggable
targets,
present
several
successful
case
studies,
discuss
remaining
challenges
future
directions.
Special
emphasis
is
placed
on
four
primary
target
categories:
intrinsically
disordered
proteins,
protein
allosteric
regulation,
interactions,
degradation,
along
with
discussion
emerging
types.
We
also
examine
how
AI-driven
methodologies
transformed
field,
from
applications
protein-ligand
complex
structure
prediction
virtual
screening
de
novo
ligand
generation
targets.
Integration
methods
experimental
techniques
expected
bring
further
breakthroughs
overcome
hurdles
As
field
continues
evolve,
advancements
hold
great
promise
expand
druggable
space,
offering
new
therapeutic
opportunities
previously
untreatable
diseases.
Biology,
Год журнала:
2025,
Номер
14(6), С. 639 - 639
Опубликована: Май 30, 2025
Clusterin
is
one
of
the
many
known
proteins
implicated
in
cancer
chemoresistance,
which
hinders
effectiveness
chemotherapy.
This
study
aimed
to
design
novel
inhibitors
targeting
clusterin
using
fragment-based
drug
discovery
(FBDD).
approach
aims
develop
new
medicines
by
identifying
small,
simple
molecules
as
“fragments”
that
can
bind
a
specific
target,
such
disease-causing
protein.
In
this
study,
primary
ligand-binding
site
and
an
allosteric
on
molecule
were
identified
through
hotspot
analysis.
We
screened
commercially
available
fragment
libraries
for
anti-cancer
activity
applied
“rule
three”
ensure
drug-like
properties.
The
highest-affinity
underwent
“fragment-growing”
potential
candidates.
After
docking
toxicity
screening,
194
candidate
drugs
identified.
Quantitative
structure-activity
relationship
(QSAR)
analysis
revealed
chemical
size
complexity
fragments
significantly
contributed
their
binding
affinity.
Pharmacokinetic
analyses
from
FBDD
followed
molecular
dynamics
simulation
top
1
final
precursor
demonstrated
comparatively
better
affinity
(average
=
−34.01
kcal/mol)
than
reference
compound
−6.15
significant
ligand
flexibility.
offers
strategy
identify
or
may
serve
against
clusterin-related
chemoresistance.
Journal of Agricultural and Food Chemistry,
Год журнала:
2024,
Номер
72(13), С. 7457 - 7463
Опубликована: Март 25, 2024
The
discovery
of
a
lead
compound
is
fundamental
to
herbicide
innovation,
but
the
limited
availability
valuable
compounds
has
hindered
their
development
in
recent
years.
By
utilizing
structural
diversity-oriented
inactive
group
strategy,
3-(2-pyridyl)-benzothiazol-2-one
was
identified
as
promising
scaffold
for
herbicides,
starting
from
benzothiazole
which
an
moiety
commonly
found
herbicides
such
mefenacet,
benazolin,
benzthiazuron,
and
fenthiaprop-ethyl.
To
investigate
structure–activity
relationship
(SAR)
these
chemicals,
series
2-(2-oxo-3-pyridyl-benzothiazol-6-yloxy)hexanoic
acid
derivatives
(VI01
∼
VI28)
were
synthesized
through
classical
nucleophilic
SNAr
reaction
using
halogenated
pyridines
6-methoxybenzothiazole-2-one.
chemical
structures
all
title
confirmed
by
NMR
MS
analysis.
Petri
dish
assays
indicated
that
many
exhibited
potent
herbicidal
activity
against
both
broad-leaf
weeds
grass
at
1.0
mg/L.
SAR
analysis
revealed
presence
trifluoromethyl
5-position
pyridine
essential
activity.
Furthermore,
carboxylic
esters
exhibit
higher
compared
amides
free
acids,
decreased
with
extension
carbon
chain.
postemergence
VI03
16
species
tested
pot
experiments
greenhouse.
demonstrated
comparable
efficacy
controlling
broadleaf
superior
carfentrazone
ethyl.
present
study
unveiled
novel
molecular
exhibiting
remarkably
These
findings
are
anticipated
provide
insights
advancement
new
offer
alternative
approach
managing
resistant
weeds.