Deepm6A-MT: A deep learning-based method for identifying RNA N6-methyladenosine sites in multiple tissues DOI
Guohua Huang,

Xiaohong Huang,

Jinyun Jiang

и другие.

Methods, Год журнала: 2024, Номер 226, С. 1 - 8

Опубликована: Март 12, 2024

Язык: Английский

Charting the epitranscriptomic landscape across RNA biotypes using native RNA nanopore sequencing DOI
Gregor Diensthuber, Eva Maria Novoa

Molecular Cell, Год журнала: 2025, Номер 85(2), С. 276 - 289

Опубликована: Янв. 1, 2025

Язык: Английский

Процитировано

2

Glucose homeostasis controls N-acetyltransferase 10-mediated ac4C modification of HK2 to drive gastric tumorigenesis DOI Creative Commons
Qiang Wang, Mengmeng Li, Chen Chen

и другие.

Theranostics, Год журнала: 2025, Номер 15(6), С. 2428 - 2450

Опубликована: Янв. 20, 2025

Rationale: Abnormal metabolic states contribute to a variety of diseases, including cancer. RNA modifications have diverse biological functions and are implicated in cancer development, gastric (GC). However, the direct relationship between glucose homeostasis 4-acetylcytosine (ac4C) modification GC remains unclear. Methods: The prognostic value acetyltransferase NAT10 expression was evaluated human cohort. Additionally, preoperative PET/CT data from patients Micro-PET/CT imaging mice were employed assess metabolism. role investigated through various experiments, xenografts, organoids, conditional knockout (cKO) mouse model. underlying mechanisms examined using dot blotting, immunofluorescence staining, co-immunoprecipitation, high-throughput sequencing, among other techniques. Results: Glucose deprivation activates autophagy-lysosome pathway, leading degradation by enhancing its interaction with sequestosome 1 (SQSTM1)/microtubule-associated protein light chain 3 alpha (LC3) complex, ultimately resulting reduction ac4C modification. Furthermore, levels elevated tissues correlate poor prognosis. A strong correlation exists 18F-FDG uptake patients. drives glycolytic metabolism carcinogenesis vitro vivo. Mechanistically, stimulates at intersection coding sequence (CDS) 3' untranslated region (3'UTR) hexokinase 2 (HK2) mRNA, stability activating thereby driving tumorigenesis. Conclusion: Our findings highlight critical crosstalk epitranscriptome carcinogenesis. This finding offers potential strategy targeting NAT10/HK2 axis for treatment patients, especially those highly active

Язык: Английский

Процитировано

2

RNA modifications in cancer DOI Creative Commons

Han Wu,

Shi Chen, Xiang Li

и другие.

MedComm, Год журнала: 2025, Номер 6(1)

Опубликована: Янв. 1, 2025

Abstract RNA modifications are emerging as critical cancer regulators that influence tumorigenesis and progression. Key modifications, such N6‐methyladenosine (m 6 A) 5‐methylcytosine 5 C), implicated in various cellular processes. These regulated by proteins write, erase, read modulate stability, splicing, translation, degradation. Recent studies have highlighted their roles metabolic reprogramming, signaling pathways, cell cycle control, which essential for tumor proliferation survival. Despite these scientific advances, the precise mechanisms affect remain inadequately understood. This review comprehensively examines role play proliferation, metastasis, programmed death, including apoptosis, autophagy, ferroptosis. It explores effects on epithelial–mesenchymal transition (EMT) immune microenvironment, particularly metastasis. Furthermore, modifications’ potential therapies, conventional treatments, immunotherapy, targeted is discussed. By addressing aspects, this aims to bridge current research gaps underscore therapeutic of targeting improve treatment strategies patient outcomes.

Язык: Английский

Процитировано

1

Targeting NAT10 attenuates homologous recombination via destabilizing DNA:RNA hybrids and overcomes PARP inhibitor resistance in cancers DOI
Zhu Xu, Mingming Zhu,

Longpo Geng

и другие.

Drug Resistance Updates, Год журнала: 2025, Номер unknown, С. 101241 - 101241

Опубликована: Март 1, 2025

Язык: Английский

Процитировано

1

Functions and mechanisms of non-histone post-translational modifications in cancer progression DOI Creative Commons
Zongyang Li, Tao Zhu, Yushu Wu

и другие.

Cell Death Discovery, Год журнала: 2025, Номер 11(1)

Опубликована: Март 31, 2025

Abstract Protein post-translational modifications (PTMs) refer to covalent and enzymatic alterations folded or nascent proteins during after protein biosynthesis alter the properties functions of proteins. PTMs are modified in a variety types affect almost all aspects cell biology. have been reported be involved cancer progression by influencing multiple signaling pathways. The mechanism action histone has extensively studied. Notably, evidence is mounting that non-histone also play vital role progression. In this review, we provide systematic description main associated with progression, including acetylation, lactylation, methylation, ubiquitination, phosphorylation, SUMOylation, based on recent studies.

Язык: Английский

Процитировано

1

5-Methylcytosine RNA modification and its roles in cancer and cancer chemotherapy resistance DOI Creative Commons
Li Fang, Tingting Liu, Yi Dong

и другие.

Journal of Translational Medicine, Год журнала: 2025, Номер 23(1)

Опубликована: Апрель 3, 2025

Recent advancements in cancer therapies have improved clinical outcomes, yet therapeutic resistance remains a significant challenge because of its complex mechanisms. Among epigenetic factors, m5C RNA modification is emerging as key player drug resistance, similar to the well-known m6A modification. affects metabolism processes, including splicing, export, translation, and stability, thereby influencing efficacy. This review highlights critical roles modulating chemotherapy, targeted therapy, radiotherapy, immunotherapy. also discusses functions regulators, methyltransferases, demethylases, m5C-binding proteins, essential modulators landscape that contribute dynamic regulatory network. Targeting these components offers promising strategy overcome resistance. We highlight need for further research elucidate specific mechanisms by which contributes develop precise m5C-targeted therapies, presenting m5C-focused strategies potential novel anticancer treatments.

Язык: Английский

Процитировано

1

Effects of RNA methylation on Tumor angiogenesis and cancer progression DOI Creative Commons
Mingyu Han, Haifeng Sun, Quanbo Zhou

и другие.

Molecular Cancer, Год журнала: 2023, Номер 22(1)

Опубликована: Дек. 6, 2023

Abstract Tumor angiogenesis plays vital roles in the growth and metastasis of cancer. RNA methylation is one most common modifications widely observed eukaryotes prokaryotes. Accumulating studies have revealed that affects occurrence development various tumors. In recent years, has been shown to play an important role regulating tumor angiogenesis. this review, we mainly elucidate mechanisms functions on progression several cancers. We then shed light methylation-associated factors pathways Finally, describe as potential biomarker novel therapeutic target.

Язык: Английский

Процитировано

21

The critical roles of m6A RNA methylation in lung cancer: from mechanism to prognosis and therapy DOI
Mei-Ning Diao,

Xiao‐Jing Zhang,

Yinfeng Zhang

и другие.

British Journal of Cancer, Год журнала: 2023, Номер 129(1), С. 8 - 23

Опубликована: Март 30, 2023

Язык: Английский

Процитировано

20

Dysregulation of Regulatory ncRNAs and Diseases DOI Open Access
M. Raafat El-Gewely

International Journal of Molecular Sciences, Год журнала: 2023, Номер 25(1), С. 24 - 24

Опубликована: Дек. 19, 2023

Cancer was initially attributed to genetic mutations and gene alterations, which resemble diseases caused by various modifications of a specific in the genome sequence [...].

Язык: Английский

Процитировано

19

Recent advances in the potential role of RNA N4-acetylcytidine in cancer progression DOI Creative Commons
Shujun Zhang, Yafeng Liu, Xiao Ma

и другие.

Cell Communication and Signaling, Год журнала: 2024, Номер 22(1)

Опубликована: Янв. 17, 2024

Abstract N 4 -acetylcytidine (ac C) is a highly conserved chemical modification widely found in eukaryotic and prokaryotic RNA, such as tRNA, rRNA, mRNA. This significantly associated with various human diseases, especially cancer, its formation depends on the catalytic activity of N-acetyltransferase 10 (NAT10), only known protein that produces ac C. review discusses detection techniques regulatory mechanisms C summarizes correlation tumor occurrence, development, prognosis, drug therapy. It also comments new biomarker for early diagnosis prognosis prediction target

Язык: Английский

Процитировано

8