The changing scenario of drug discovery using AI to deep learning: Recent advancement, success stories, collaborations, and challenges DOI Creative Commons
Chiranjib Chakraborty, Manojit Bhattacharya, Sang‐Soo Lee

и другие.

Molecular Therapy — Nucleic Acids, Год журнала: 2024, Номер 35(3), С. 102295 - 102295

Опубликована: Авг. 8, 2024

Due to the transformation of artificial intelligence (AI) tools and technologies, AI-driven drug discovery has come forefront. It reduces time expenditure. these advantages, pharmaceutical industries are concentrating on discovery. Several molecules have been discovered using AI-based techniques tools, several newly AI-discovered already entered clinical trials. In this review, we first present data their resources in sector for illustrated some significant algorithms or used AI ML which field. We gave an overview deep neural network (NN) models compared them with NNs. Then, illustrate recent advancement landscape learning, such as identification targets, prediction structure, estimation drug-target interaction, binding affinity, design

Язык: Английский

AlphaFold2 and its applications in the fields of biology and medicine DOI Creative Commons
Zhenyu Yang, Xiaoxi Zeng, Yi Zhao

и другие.

Signal Transduction and Targeted Therapy, Год журнала: 2023, Номер 8(1)

Опубликована: Март 14, 2023

Abstract AlphaFold2 (AF2) is an artificial intelligence (AI) system developed by DeepMind that can predict three-dimensional (3D) structures of proteins from amino acid sequences with atomic-level accuracy. Protein structure prediction one the most challenging problems in computational biology and chemistry, has puzzled scientists for 50 years. The advent AF2 presents unprecedented progress protein attracted much attention. Subsequent release more than 200 million predicted further aroused great enthusiasm science community, especially fields medicine. thought to have a significant impact on structural research areas need information, such as drug discovery, design, function, et al. Though time not long since was developed, there are already quite few application studies medicine, many them having preliminarily proved potential AF2. To better understand promote its applications, we will this article summarize principle architecture well recipe success, particularly focus reviewing applications Limitations current also be discussed.

Язык: Английский

Процитировано

272

AI-powered therapeutic target discovery DOI Creative Commons
Frank W. Pun, Ivan V. Ozerov, Alex Zhavoronkov

и другие.

Trends in Pharmacological Sciences, Год журнала: 2023, Номер 44(9), С. 561 - 572

Опубликована: Июль 19, 2023

Disease modeling and target identification are the most crucial initial steps in drug discovery, influence probability of success at every step development. Traditional is a time-consuming process that takes years to decades usually starts an academic setting. Given its advantages analyzing large datasets intricate biological networks, artificial intelligence (AI) playing growing role modern identification. We review recent advances focusing on breakthroughs AI-driven therapeutic exploration. also discuss importance striking balance between novelty confidence selection. An increasing number AI-identified targets being validated through experiments several AI-derived drugs entering clinical trials; we highlight current limitations potential pathways for moving forward.

Язык: Английский

Процитировано

157

A small-molecule TNIK inhibitor targets fibrosis in preclinical and clinical models DOI Creative Commons
Feng Ren,

Alex Aliper,

Jian Chen

и другие.

Nature Biotechnology, Год журнала: 2024, Номер unknown

Опубликована: Март 8, 2024

Abstract Idiopathic pulmonary fibrosis (IPF) is an aggressive interstitial lung disease with a high mortality rate. Putative drug targets in IPF have failed to translate into effective therapies at the clinical level. We identify TRAF2- and NCK-interacting kinase (TNIK) as anti-fibrotic target using predictive artificial intelligence (AI) approach. Using AI-driven methodology, we generated INS018_055, small-molecule TNIK inhibitor, which exhibits desirable drug-like properties activity across different organs vivo through oral, inhaled or topical administration. INS018_055 possesses anti-inflammatory effects addition its profile, validated multiple studies. Its safety tolerability well pharmacokinetics were randomized, double-blinded, placebo-controlled phase I trial (NCT05154240) involving 78 healthy participants. A separate China, CTR20221542, also demonstrated comparable pharmacokinetic profiles. This work was completed roughly 18 months from discovery preclinical candidate nomination demonstrates capabilities of our generative drug-discovery pipeline.

Язык: Английский

Процитировано

92

Artificial Intelligence for Drug Discovery: Are We There Yet? DOI

Catrin Hasselgren,

Tudor I. Oprea

The Annual Review of Pharmacology and Toxicology, Год журнала: 2023, Номер 64(1), С. 527 - 550

Опубликована: Сен. 22, 2023

Drug discovery is adapting to novel technologies such as data science, informatics, and artificial intelligence (AI) accelerate effective treatment development while reducing costs animal experiments. AI transforming drug discovery, indicated by increasing interest from investors, industrial academic scientists, legislators. Successful requires optimizing properties related pharmacodynamics, pharmacokinetics, clinical outcomes. This review discusses the use of in three pillars discovery: diseases, targets, therapeutic modalities, with a focus on small molecule drugs. technologies, generative chemistry, machine learning, multi-property optimization, have enabled several compounds enter trials. The scientific community must carefully vet known information address reproducibility crisis. full potential can only be realized sufficient ground truth appropriate human intervention at later pipeline stages.

Язык: Английский

Процитировано

89

Innovative Robotic Technologies and Artificial Intelligence in Pharmacy and Medicine: Paving the Way for the Future of Health Care—A Review DOI Creative Commons
Maryna Stasevych, Viktor Zvarych

Big Data and Cognitive Computing, Год журнала: 2023, Номер 7(3), С. 147 - 147

Опубликована: Авг. 30, 2023

The future of innovative robotic technologies and artificial intelligence (AI) in pharmacy medicine is promising, with the potential to revolutionize various aspects health care. These advances aim increase efficiency, improve patient outcomes, reduce costs while addressing pressing challenges such as personalized need for more effective therapies. This review examines major robotics AI pharmaceutical medical fields, analyzing advantages, obstacles, implications In addition, prominent organizations research institutions leading way these technological advancements are highlighted, showcasing their pioneering efforts creating utilizing state-of-the-art solutions medicine. By thoroughly current state care exploring possibilities further progress, this work aims provide readers a comprehensive understanding transformative power evolution healthcare sector. Striking balance between embracing technology preserving human touch, investing R&D, establishing regulatory frameworks within ethical guidelines will shape systems. seamless integration systems benefit patients providers.

Язык: Английский

Процитировано

60

Reinvent 4: Modern AI–driven generative molecule design DOI Creative Commons
Hannes H. Loeffler, Jiazhen He, Alessandro Tibo

и другие.

Journal of Cheminformatics, Год журнала: 2024, Номер 16(1)

Опубликована: Фев. 21, 2024

REINVENT 4 is a modern open-source generative AI framework for the design of small molecules. The software utilizes recurrent neural networks and transformer architectures to drive molecule generation. These generators are seamlessly embedded within general machine learning optimization algorithms, transfer learning, reinforcement curriculum learning. enables facilitates de novo design, R-group replacement, library linker scaffold hopping optimization. This contribution gives an overview describes its design. Algorithms their applications discussed in detail. command line tool which reads user configuration either TOML or JSON format. aim this release provide reference implementations some most common algorithms based An additional goal with create education future innovation molecular available from https://github.com/MolecularAI/REINVENT4 released under permissive Apache 2.0 license. Scientific contribution. provides implementation where also being used production support in-house drug discovery projects. publication one code full documentation thereof will increase transparency foster innovation, collaboration education.

Язык: Английский

Процитировано

60

Machine learning in preclinical drug discovery DOI

Denise B. Catacutan,

Jeremie Alexander,

Autumn Arnold

и другие.

Nature Chemical Biology, Год журнала: 2024, Номер 20(8), С. 960 - 973

Опубликована: Июль 19, 2024

Язык: Английский

Процитировано

51

Quantum computing for near-term applications in generative chemistry and drug discovery DOI Creative Commons
Alexey N. Pyrkov,

Alex Aliper,

Dmitry S. Bezrukov

и другие.

Drug Discovery Today, Год журнала: 2023, Номер 28(8), С. 103675 - 103675

Опубликована: Июнь 17, 2023

In recent years, drug discovery and life sciences have been revolutionized with machine learning artificial intelligence (AI) methods. Quantum computing is touted to be the next most significant leap in technology; one of main early practical applications for quantum solutions predicted chemistry simulations. Here, we review near-term their advantages generative highlight challenges that can addressed noisy intermediate-scale (NISQ) devices. We also discuss possible integration systems running on computers into established AI platforms.

Язык: Английский

Процитировано

45

Machine learning-aided generative molecular design DOI
Yuanqi Du, Arian R. Jamasb, Jeff Guo

и другие.

Nature Machine Intelligence, Год журнала: 2024, Номер 6(6), С. 589 - 604

Опубликована: Июнь 18, 2024

Язык: Английский

Процитировано

42

The role of artificial intelligence in pandemic responses: from epidemiological modeling to vaccine development DOI Creative Commons

Mayur Suresh Gawande,

N. N. Zade,

Praveen Kumar

и другие.

Molecular Biomedicine, Год журнала: 2025, Номер 6(1)

Опубликована: Янв. 3, 2025

Abstract Integrating Artificial Intelligence (AI) across numerous disciplines has transformed the worldwide landscape of pandemic response. This review investigates multidimensional role AI in pandemic, which arises as a global health crisis, and its preparedness responses, ranging from enhanced epidemiological modelling to acceleration vaccine development. The confluence technologies guided us new era data-driven decision-making, revolutionizing our ability anticipate, mitigate, treat infectious illnesses. begins by discussing impact on emerging countries worldwide, elaborating critical significance modelling, bringing enabling forecasting, mitigation response pandemic. In epidemiology, AI-driven models like SIR (Susceptible-Infectious-Recovered) SIS (Susceptible-Infectious-Susceptible) are applied predict spread disease, preventing outbreaks optimising distribution. also demonstrates how Machine Learning (ML) algorithms predictive analytics improve knowledge disease propagation patterns. collaborative aspect discovery clinical trials various vaccines is emphasised, focusing constructing AI-powered surveillance networks. Conclusively, presents comprehensive assessment impacts builds AI-enabled dynamic collaborating ML Deep (DL) techniques, develops implements trials. focuses screening, contact tracing monitoring virus-causing It advocates for sustained research, real-world implications, ethical application strategic integration strengthen collective face alleviate effects issues.

Язык: Английский

Процитировано

10