As
a
fundamental
problem
in
organic
chemistry,
synthesis
planning
aims
at
designing
energy
and
cost-efficient
reaction
pathways
for
target
compounds.
In
planning,
it
is
crucial
to
understand
regioselectivity,
or
the
preference
of
over
competing
sites.
Precisely
predicting
regioselectivity
enables
early
exclusion
unproductive
reactions
paves
way
high-yielding
synthetic
routes
with
minimal
separation
material
costs.
However,
still
emerging
state
combine
chemical
knowledge
data-driven
methods
make
practical
predictions
regioselectivity.
At
same
time,
metal-catalyzed
cross-coupling
have
profoundly
transformed
medicinal
thus
become
one
most
frequently
encountered
types
planning.
this
work,
we
first
time
introduce
informed
message
passing
neural
network(MPNN)
framework
that
directly
identifies
intrinsic
major
products
regioselective
ambiguity.
Integrating
both
principle
methods,
our
model
achieves
an
overall
accuracy
96.51%
on
test
set
eight
typical
types,
including
Suzuki-Miyaura,
Stille,
Sonogashira,
Buchwald-Hartwig,
Hiyama,
Kumada,
Negishi,
Heck
reactions,
outperforming
other
commonly
used
types.
To
integrate
electronic
effects
steric
prediction,
propose
quantitative
method
measure
hindrance
effect.
Our
checker
can
successfully
identify
induced
solely
by
hindrance.
Notably
under
scenarios,
outperforms
6
experimental
chemists
average
working
experience
10
years
industry
terms
cases.
We
also
exemplified
usage
fixing
designed
open-access
software
improving
identifying
low-cost
starting
materials.
assist
general
making
prompt
decisions
about
developed
free
web-based
AI-empowered
tool.
code
web
tool
been
made
available
https://github.com/Chemlex-AI/regioselectivity
https://ai.tools.chemlex.com/region-choose,
respectively.
Organometallics,
Год журнала:
2023,
Номер
42(19), С. 2692 - 2730
Опубликована: Сен. 21, 2023
N-heterocyclic
carbene
(NHC)
ligands
have
evolved
from
being
simple
lab
curiosities
to
tertiary
phosphine
mimics
finally
take
center
stage
as
unique
supporting
in
organometallic
chemistry,
homogeneous
catalysis,
and
more
recently
medicinal
chemistry
materials
science
applications.
Some
of
these
aspects
are
presented
here
a
perspective
researchers
that
been
fascinated
by
the
area
for
quite
some
time.
Journal of the American Chemical Society,
Год журнала:
2024,
Номер
146(28), С. 19249 - 19260
Опубликована: Июль 3, 2024
Two
limiting
mechanisms
are
possible
for
oxidative
addition
of
(hetero)aryl
(pseudo)halides
at
Pd(0):
a
3-centered
concerted
and
nucleophilic
displacement
mechanism.
Until
now,
there
has
been
little
understanding
about
when
each
mechanism
is
relevant.
Prior
investigations
to
distinguish
between
these
pathways
were
limited
few
specific
combinations
the
substrate
ligand.
Here,
we
computationally
evaluated
over
180
transition
structures
in
order
determine
mechanistic
trends
based
on
substrate,
ligand(s),
coordination
number.
Natural
abundance
ACS Catalysis,
Год журнала:
2022,
Номер
12(15), С. 8822 - 8828
Опубликована: Июль 8, 2022
In
cross-coupling
reactions,
dihaloheteroarenes
are
usually
most
reactive
at
C─halide
bonds
adjacent
to
a
heteroatom.
This
selectivity
has
been
previously
rationalized.
However,
no
mechanistic
explanation
exists
for
anomalous
reports
in
which
specific
ligands
effect
inverted
with
dihalopyridines
and
-pyridazines.
Here
we
provide
evidence
that
these
uniquely
promote
oxidative
addition
12e-
Pd(0).
Computations
indicate
14e-
Pd(0)
can
favor
different
mechanisms
due
differences
their
HOMO
symmetries.
These
shown
lead
site
preferences,
where
an
atypical
distal
nitrogen.
ACS Catalysis,
Год журнала:
2023,
Номер
13(17), С. 11399 - 11421
Опубликована: Авг. 15, 2023
The
oxidative
addition
(OA)
of
organic
electrophiles
to
Pd(0)
is
a
fundamental
step
in
organopalladium
chemistry
and
plays
key
role
palladium-catalyzed
cross-coupling
reactions.
This
perspective
summarizes
selected
mechanistic
studies
the
Pd(0)-to-Pd(II)
OA
process
involving
halides
pseudohalides
with
focus
on
systems
relevant
catalytic
results
are
organized
according
nature
supporting
ligands,
extracting
general
trends,
describing
most
examples.
formation
active
species
from
precatalysts
surveyed,
as
well
influence
different
that
could
be
present
under
conditions
process,
providing
guidelines
facilitate
understanding
improvement
Journal of the American Chemical Society,
Год журнала:
2025,
Номер
unknown
Опубликована: Янв. 19, 2025
Under
most
conditions,
2,4-dihalopyrimidines
undergo
substitution
reactions
at
C4.
Here
we
report
that
Pd(II)
precatalysts
supported
by
bulky
N-heterocyclic
carbene
ligands
uniquely
effect
C2-selective
cross-coupling
of
2,4-dichloropyrimidine
with
thiols.
The
regioselectivity
this
reaction
stands
in
stark
contrast
to
∼1500
previously
reported
Pd-catalyzed
cross-couplings
favor
C4
the
absence
other
substituents
on
pyrimidine
ring.
Selectivity
catalytic
system
herein
is
extremely
sensitive
structure
precatalyst,
largely
due
competing
C4-selective
nucleophilic
aromatic
substitution.
C2-selectivity
high
1°
thiols
and
thiophenols,
a
range
substituted
dichloropyrimidines
can
be
used.
atypical
selectivity
transformation
may
facilitate
diversity-oriented
synthesis,
as
demonstrated
for
derivatives
an
antiviral
agent.
these
C2─Cl
cleavage
not
take
place
through
typical
oxidative
addition
pathway.
The Journal of Organic Chemistry,
Год журнала:
2025,
Номер
90(5), С. 1895 - 1904
Опубликована: Янв. 24, 2025
Multipalladium
clusters
possess
peculiar
structures
and
synergistic
effects
for
reactivity
selectivity.
Herein,
C3-symmetric
tripalladium
(1,
0.5
mol
%)
afford
C2-regioselective
SMCC
of
2,4-dibromopyridine
with
phenylboronic
acids
or
pinacol
esters
(C2:C4
up
to
98:1),
in
contrast
Pd(OAc)2
ligand-free
conditions.
In
addition,
similar
C2-selectivity
was
achieved
Sonogashira,
Negishi,
Kumada
coupling
reactions.
This
method
highlights
their
powerful
catalytic
ability,
exclusive
C2-selectivity,
broad
substrate
scope,
efficient
amplification,
multiple
ligand-exchange
feasibility
demonstrates
that
the
conventional
sites
could
be
successfully
regulated
even
reversed
by
catalysts.
ACS Catalysis,
Год журнала:
2022,
Номер
12(19), С. 12014 - 12026
Опубликована: Сен. 19, 2022
The
vast
majority
(≥90%)
of
literature
reports
agree
on
the
regiochemical
outcomes
Pd-catalyzed
cross-coupling
reactions
for
most
classes
dihalogenated
N-heteroarenes.
Despite
a
well-established
mechanistic
rationale
typical
selectivity,
several
examples
reveal
that
changes
to
catalyst
can
switch
site
leading
unconventional
product.
In
this
Perspective,
we
survey
these
unusual
cases
in
which
divergent
selectivity
is
controlled
by
ligands
or
speciation.
some
cases,
origin
inverted
has
been
established,
but
others
mechanism
remains
unknown.
This
Perspective
concludes
with
discussion
remaining
challenges
and
opportunities
field
site-selective
cross-coupling.
These
include
developing
better
understanding
oxidative
addition
mechanisms,
role
speciation
establishing
an
explanation
influence
ring
substituents
outcome,
inverting
"stubborn"
substrates,
minimizing
unwanted
over-reaction
di-
polyhalogenated
substrates.
Organic Chemistry Frontiers,
Год журнала:
2023,
Номер
10(17), С. 4408 - 4436
Опубликована: Янв. 1, 2023
This
article
presents
a
comprehensive
analysis
of
the
progress
in
palladium-catalyzed
coupling
reactions,
with
an
emphasis
on
how
ligand
characteristics
affect
chemoselectivity
aryl
(pseudo)halides.
Journal of the American Chemical Society,
Год журнала:
2023,
Номер
145(28), С. 15507 - 15527
Опубликована: Июль 1, 2023
We
combine
experimental
and
computational
investigations
to
compare
understand
catalytic
arene
alkenylation
using
the
Pd(II)
Rh(I)
precursors
Pd(OAc)2
[(η2-C2H4)2Rh(μ-OAc)]2
with
arene,
olefin,
Cu(II)
carboxylate
at
elevated
temperatures
(>120
°C).
Under
specific
conditions,
previous
efforts
have
identified
heterotrimetallic
cyclic
PdCu2(η2-C2H4)3(μ-OPiv)6
[(η2-C2H4)2Rh(μ-OPiv)2]2(μ-Cu)
(OPiv
=
pivalate)
species
as
likely
active
catalysts
for
these
processes.
Further
studies
of
catalyst
speciation
suggest
a
complicated
equilibrium
between
Cu(II)-containing
complexes
containing
one
Rh
or
Pd
atom
two
atoms.
At
120
°C,
catalysis
produces
styrene
>20-fold
more
rapidly
than
Pd.
Also,
is
∼98%
selective
formation,
while
∼82%
selective.
Our
indicate
that
has
higher
predilection
toward
olefin
functionalization
form
undesired
vinyl
ester,
arene/olefin
coupling.
However,
temperatures,
converts
ester
which
proposed
occur
through
low-valent
Pd(0)
clusters
are
formed
in
situ.
Regardless
functionality,
regioselectivity
mono-substituted
arenes
gives
an
approximate
2:1
meta/para
ratio
minimal
ortho
C-H
activation.
In
contrast,
selectivity
significantly
influenced
by
electronics,
electron-rich
giving
1:2:2
ortho/meta/para
ratio,
electron-deficient
(α,α,α)-trifluorotoluene
3:1
functionalization.
Kinetic
intermolecular
ethenylation
competition
experiments
find
reacts
most
benzene,
rate
does
not
correlate
electronics.
catalysis,
react
less
benzene.
These
findings,
combination
results,
consistent
activation
step
involving
significant
η1-arenium
character
due
Pd-mediated
electrophilic
aromatic
substitution
character.
mechanism
sensitive
arene-substituent
we
propose
indicates
Rh-mediated
ACS Medicinal Chemistry Letters,
Год журнала:
2024,
Номер
15(6), С. 822 - 827
Опубликована: Май 1, 2024
Cryptococcal
neoformans
and
Candida
albicans
are
among
the
most
prevalent
causes
of
life-threatening
fungal
infections
globally.
The
high
mortality
associated
with
these
despite
current
antifungal
therapy
highlights
need
for
new
drugs.
In
our
previous
work,
we
demonstrated
that
an
analogue
clinically
used
antimalarial
mefloquine,
(8-chloro-2-(4-chlorophenyl)quinolin-4-yl)(piperidin-2-yl)methanol
(4377),
has
both
activity
ability
to
penetrate
central
nervous
system.
Herein
describe
synthesis
assay
all
four
stereoisomers
4377.
All
retain
potent
erythro
enantiomers
having
MIC
values
1
4
μg/mL
against
C.
albicans,
respectively,
threo
enantiomers,
2
8
μg/mL,
respectively.
These
results
indicate
stereochemistry
piperidine
methanol
group
is
not
critical
properties
4377
gives
guidance
future
medicinal
chemistry
optimization
efforts.