Journal of Carbohydrate Chemistry,
Год журнала:
2023,
Номер
42(4-6), С. 197 - 215
Опубликована: Июль 24, 2023
Human
coronavirus
OC43
(HCoV-OC43)
causes
severe
respiratory
tract
illness
in
humans.
In
the
present
study,
we
carried
out
100
ns
molecular
dynamics
(MD)
simulations
to
investigate
conformational
of
HCoV-OC43
spike
(S)
glycoprotein
complexes
with
sialic
acid
(SIA)
analogs.
The
binding
affinity
between
S
and
SIA
analogs
is
analyzed
using
NAMD
MM-PBSA
free
energy
calculation.
It
concluded
from
results
MM/PBSA
that
order
specificity
toward
9-O-Ac-Sia
>
Neu5Gc
zanamivir
Neu5Ac2en.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Май 24, 2024
Abstract
Influenza
A
viruses
(IAV)
from
the
H5N1
2.3.4.4b
clade
are
circulating
in
dairy
farms
United
States
of
America,
and
goat
infections
have
also
been
reported.
These
ruminants
were
presumed
not
to
be
hosts
for
IAVs.
Previously,
IAV-positive
mammalian
species
hunters
scavengers,
possibly
getting
infected
while
feeding
on
birds.
It
is
now
that
circulate
US
cattle
transmit
through
a
mammary
gland
route,
contrast
transmission
by
aerosols
via
respiratory
tract,
although
latter
cannot
excluded.
The
receptor
display
tract
cows
IAVs
unknown.
Here,
we
used
recombinant
HA
proteins
representing
current
classical
H5
determine
distribution
IAV
receptors
tissues
goats.
Most
sialome
cow
lined
with
sialic
acid
modifications
such
as
N-glycolyl
O-acetyl,
which
bound
IAV.
Interestingly,
protein
isolates
significantly
gland,
whereas
failed
do
so.
Furthermore,
9-O-acetyl
modification
prominent
all
tested,
5-N-glycolyl
not,
resulting
avian
hemagglutinins.
This
could
explain
high
levels
virus
found
these
milk,
adding
supporting
data
this
possible
route.
Journal of Virology,
Год журнала:
2024,
Номер
98(11)
Опубликована: Окт. 10, 2024
ABSTRACT
Influenza
A
viruses
(IAVs)
from
the
H5N1
2.3.4.4b
clade
are
circulating
in
dairy
farms
USA.;
ruminants
were
presumed
not
to
be
hosts
for
IAVs.
Previously,
IAV-positive
mammalian
species
hunters
and
scavengers,
possibly
getting
infected
while
feeding
on
birds.
It
is
now
recognized
that
circulate
US
cattle
transmit
through
a
mammary
gland
route,
contrast
transmission
by
aerosols
via
respiratory
tract.
The
sialome
cow
tract
so
far
solely
defined
using
plant
lectins.
Here,
we
used
recombinant
HA
proteins
representing
current
classical
H5
determine
distribution
of
IAV
receptors
tissues
cows.
We
complemented
our
study
mapping
glycan
upper
lower
tracts
horses
pigs.
Most
lined
with
sialic
acid
modifications,
such
as
N-glycolyl
O-acetyl,
which
bound
IAV.
Interestingly,
protein
isolates
significantly
gland,
whereas
failed
do
so.
Furthermore,
9-O-acetyl
modification
prominent
all
tested,
5-N-glycolyl
not,
resulting
display
avian
hemagglutinins.
This
could
explain
high
levels
virus
found
these
milk,
adding
supporting
data
this
route.
IMPORTANCE
influenza
viruses,
usually
affect
birds,
have
been
USA.
Surprisingly,
spreading
among
cows,
there
possibility
they
spread
air
but
their
milk
glands.
To
understand
better,
studied
how
attaches
cow’s
glands
specific
viral
proteins.
cow-associated
binds
strongly
glands,
unlike
older
versions
infecting
might
why
suggesting
new
way
spreading.
Conformational
dynamics
of
the
severe
acute
respiratory
syndrome
coronavirus
2
(SARS-CoV-2)
spike
glycoprotein
(S)
mediate
exposure
binding
site
for
cellular
receptor,
angiotensin-converting
enzyme
(ACE2).
The
N-terminal
domain
(NTD)
S
binds
terminal
sialic
acid
(SA)
moieties
on
cell
surface,
but
functional
role
this
interaction
in
virus
entry
is
unknown.
Here,
we
report
that
NTD-SA
enhances
both
S-mediated
attachment
and
ACE2
binding.
Through
single-molecule
Förster
resonance
energy
transfer
imaging
individual
trimers,
demonstrate
SA
to
NTD
allosterically
shifts
conformational
equilibrium,
favoring
enhanced
ACE2-binding
site.
Antibodies
target
block
binding,
which
contributes
their
mechanism
neutralization.
These
findings
inform
mechanisms
activation
at
surface.
Viruses,
Год журнала:
2025,
Номер
17(2), С. 256 - 256
Опубликована: Фев. 13, 2025
In
2021,
at
the
height
of
COVID-19
pandemic,
coronavirus
research
spiked,
with
over
83,000
original
articles
related
to
word
"coronavirus"
added
online
resource
PubMed.
Just
2
years
later,
in
2023,
only
30,900
were
added.
While,
irrefutably,
funding
drastically
decreased,
a
possible
explanation
for
decrease
interest
is
that
projects
on
SARS-CoV-2,
causative
agent
COVID-19,
halted
due
challenge
establishing
good
cellular
or
animal
model
system.
Most
laboratories
do
not
have
capabilities
culture
SARS-CoV-2
'in
house'
as
this
requires
Biosafety
Level
(BSL)
3
laboratory.
Until
recently,
BSL
laboratory
endemic
coronaviruses
was
arduous
low
cytopathic
effect
isolated
cell
infection
models
and
lack
means
quantify
viral
loads.
The
purpose
review
article
compare
human
provide
an
assessment
latest
techniques
use
coronaviruses-HCoV-229E,
HCoV-OC43,
HCoV-NL63,
HCoV-HKU1-as
lower-biosafety-risk
more
pathogenic
coronaviruses-SARS-CoV-2,
SARS-CoV,
MERS-CoV.
Virology,
Год журнала:
2025,
Номер
unknown, С. 110507 - 110507
Опубликована: Март 1, 2025
Severe
Acute
Respiratory
Syndrome
Coronavirus
2
(SARS-CoV-2)
is
an
enveloped
RNA
virus
that
caused
the
Disease
2019
(COVID-19)
pandemic.
The
SARS-CoV-2
Spike
glycoprotein
binds
to
angiotensin
converting
enzyme
(ACE2)
on
host
cells
facilitate
viral
entry.
However,
presence
of
in
nearly
all
human
organs
-
including
those
with
little
or
no
ACE2
expression
suggests
involvement
alternative
receptors.
Recent
studies
have
identified
several
cellular
proteins
and
molecules
influence
entry
through
ACE2-dependent,
ACE2-independent,
inhibitory
mechanisms.
In
this
review,
we
explore
how
these
receptors
were
identified,
their
patterns
roles
entry,
impact
infection.
Additionally,
discuss
therapeutic
strategies
aimed
at
disrupting
virus-receptor
interactions
mitigate
COVID-19
pathogenesis.
Vaccines,
Год журнала:
2024,
Номер
12(5), С. 487 - 487
Опубликована: Май 1, 2024
Transmissibility
and
immune
evasion
of
the
recently
emerged,
highly
mutated
SARS-CoV-2
BA.2.87.1
are
unknown.
Here,
we
report
that
efficiently
enters
human
cells
but
is
more
sensitive
to
antibody-mediated
neutralization
than
currently
dominating
JN.1
variant.
Acquisition
adaptive
mutations
might
thus
be
needed
for
efficient
spread
in
population.
Nature Communications,
Год журнала:
2025,
Номер
16(1)
Опубликована: Май 5, 2025
The
human
coronavirus
HKU1
uses
both
sialoglycoconjugates
and
the
protein
transmembrane
serine
protease
2
(TMPRSS2)
as
receptors.
Carbohydrate
binding
leads
to
spike
up
conformation
required
for
TMPRSS2
binding,
an
outcome
suggesting
a
distinct
mechanism
driving
fusion
of
viral
host
cell
membranes.
Nevertheless,
conformational
changes
promoted
by
carbohydrate
have
not
been
fully
elucidated
basis
HKU1's
specificity
remains
unknown.
Reported
here
are
high
resolution
cryo-EM
structures
trimer
in
its
apo
form
complex
with
moiety
candidate
receptor,
9-O-acetylated
GD3
ganglioside.
show
that
monomer
can
exist
four
discrete
states
progression
through
them
would
promote
upon
binding.
We
also
six-amino-acid
insert
is
determinant
gangliosides
containing
α2-8-linked
disialic
acid
shows
weak
affinity
sialic
acids
found
on
decoy
receptors
such
mucins.
Viruses,
Год журнала:
2023,
Номер
16(1), С. 34 - 34
Опубликована: Дек. 23, 2023
Panels
of
pre-
and
post-pandemic
farm
animals,
wild
boar
human
sera,
including
sera
able
to
neutralize
SARS-CoV-2
in
vitro,
were
tested
serological
tests
determine
their
cross-reactivity
with
β-
α-CoV
originating
from
animals.
Sera
neutralization
assays
high
ascending
concentrations
(up
1
×
104
TCID50
units/well)
β-CoV
Bovine
coronavirus
(BCV),
SARS-CoV-2,
porcine
α-CoV-transmissible
gastroenteritis
virus
(TGEV).
In
addition,
for
immunostaining
cells
infected
hemagglutinating
encephalomyelitis
(PHEV).
Testing
revealed
a
significantly
higher
percentage
BCV
(78%)
humans
that
had
experienced
infection
(SARS-CoV-2
convalescent
sera)
than
was
observed
pre-pandemic
(37%).
Also,
46%
these
neutralized
the
highest
concentration
(5
103
TCID50/well)
tested,
whereas
only
9.6%
did.
Largely
similar
percentages
staining
PHEV-infected
by
panels
sera.
Furthermore,
collected
boars
living
near
densely
populated
area
The
Netherlands
also
showed
(43%)
stronger
this
(21%)
(28%)
(20%)
nature
reserve
park
limited
access
public.
High
cows
(100%),
pigs
45%),
sheep
(36%)
rabbits
(60%).
However,
cross-neutralization
restricted
specific
herds
or
farms.
TGEV
(68%)
few
(4.6%).
None
PHEV
cross-reacting
pre-pandemic,
animal
effectively
vitro.
Preexisting
antibodies
This
boosted
after
infection,
indicating
activated
“memory”
antibody
response
against
structurally
related
epitopes
expressed
on
surface
broad
range
heterologous
CoV,
isolated
Further
research
is
needed
elucidate
if
symptomless
environmental
exposure
another
triggers
such
other
free-living
Abstract
Enveloped
viruses
carry
one
or
multiple
proteins
with
receptor‐binding
functionalities.
Functional
receptors
can
be
glycans,
proteinaceous,
both;
therefore,
recombinant
protein
approaches
are
instrumental
in
attaining
new
insights
regarding
viral
envelope
properties.
Visualizing
and
measuring
receptor
binding
typically
entails
antibody
detection
direct
labeling,
whereas
fluorescent
fusions
attractive
tools
molecular
biology.
Here,
we
report
a
suite
of
distinct
fusions,
both
N‐
C‐terminal,
for
influenza
A
virus
hemagglutinins
SARS‐CoV‐2
spike
RBD.
The
contained
three
six
barrels
were
applied
directly
to
cells
assess