Exploring the druggability of the UEV domain of human TSG101 in search for broad‐spectrum antivirals DOI Creative Commons
Fernando Montero,

Marisa Parra‐López,

Alejandro Rodríguez‐Martínez

и другие.

Protein Science, Год журнала: 2024, Номер 34(1)

Опубликована: Дек. 26, 2024

Abstract The ubiquitin E2 variant domain of TSG101 (TSG101‐UEV) plays a pivotal role in protein sorting and virus budding by recognizing PTAP motifs within ubiquitinated proteins. Disruption TSG101‐UEV/PTAP interactions has emerged as promising strategy for the development host‐oriented broad‐spectrum antivirals with low susceptibility to resistance. is challenging target characterized an extended flat binding interface, affinity ligands, complex energetics. Here, we assess druggability interface searching drug‐like inhibitors evaluating their ability block recognition, impair budding, inhibit viral proliferation. A discovery workflow was established combining vitro miniaturized HTS assays set cell‐based activity including high‐content bimolecular complementation, virus‐like particle release measurement, antiviral testing live infection. This approach allowed us identify chemically diverse molecules that IC50s μM range are able disrupt interaction between full‐length proteins human cells replication. State‐of‐the‐art molecular docking studies reveal active compounds exploit hotspots at site, unlocking full potential TSG101‐UEV pockets. These represent hits novel through targeted optimization also valuable tools investigating involvement ESCRT proliferation different families study secondary effects induced disruption ESCRT/virus interactions.

Язык: Английский

PBPK‐led assessment of antimalarial drugs as candidates for Covid‐19: Simulating concentrations at the site of action to inform repurposing strategies DOI Creative Commons
Nada Abla, Lisa M. Almond, Jennifer J. Bonner

и другие.

Clinical and Translational Science, Год журнала: 2024, Номер 17(7)

Опубликована: Июль 1, 2024

Abstract The urgent need for safe, efficacious, and accessible drug treatments to treat coronavirus disease 2019 (COVID‐19) prompted a global effort evaluate repurposing opportunities. Pyronaridine amodiaquine are both components of approved antimalarials with in vitro activity against severe acute respiratory syndrome 2 (SARS‐CoV‐2). In does not always translate clinical efficacy across therapeutic dose range. This study applied available, verified, physiologically based pharmacokinetic (PBPK) models pyronaridine, amodiaquine, its active metabolite N‐desethylamodiaquine (DEAQ) predict concentrations lung tissue relative plasma or blood the default healthy virtual population. Lung exposures were compared published data reported range EC 50 values SARS‐CoV‐2. multicompartment permeability‐limited PBPK model, predicted total C max mass pyronaridine was 34.2 μM on Day 3, 30.5‐fold greater than (1.12 μM) 0.530 μM, 8.83‐fold (0.060 μM). perfusion‐limited DEAQ 3 (30.2 21.4‐fold (1.41 Based available data, DEAQ, but appeared sufficient inhibit SARS‐CoV‐2 replication. Simulations indicated standard dosing regimens pyronaridine‐artesunate artesunate‐amodiaquine have potential COVID‐19. These findings informed strategies select most relevant compounds investigation Clinical model verification may become from ongoing studies.

Язык: Английский

Процитировано

2

Computational and Experimental Approaches Identify Beta-Blockers as Potential SARS-CoV-2 Spike Inhibitors DOI
Ana C. Puhl, Melina Mottin, Carolina Q. Sacramento

и другие.

ACS Omega, Год журнала: 2022, Номер 7(32), С. 27950 - 27958

Опубликована: Авг. 8, 2022

Finding antivirals for SARS-CoV-2 is still a major challenge, and many computational experimental approaches have been employed to find solution this problem. While the global vaccination campaigns are primary driver of controlling current pandemic, orally bioavailable small-molecule drugs biologics critical overcome issue. Improved therapeutics prophylactics required treat people with circulating emerging new variants, addressing severe infection, underlying or immunocompromised conditions. The envelope spike challenging target viral entry inhibitors. Pindolol presented good docking score in previous virtual screening using calculations after Food Drug Administration (FDA)-approved drug library 2400 molecules as potential candidates block protein interaction angiotensin-converting enzyme 2 (ACE-2). Here, we expanded evaluation identify five beta-blockers against several techniques, such microscale thermophoresis, NanoDSF, vitro assays different cell lines. These data identified carvedilol Kd 364 ± 22 nM activity (EC50 7.57 μM, CC50 18.07 μM) Calu-3 cells. We shown how can apply multiple that be further optimized improve anti-SARS-CoV-2 activity.

Язык: Английский

Процитировано

10

Synthesis and Evaluation of 9-Aminoacridines with SARS-CoV-2 Antiviral Activity DOI Creative Commons
Thane Jones, Natalia Monakhova, Florence Guivel‐Benhassine

и другие.

ACS Omega, Год журнала: 2023, Номер 8(43), С. 40817 - 40822

Опубликована: Окт. 19, 2023

There have been relatively few small molecules developed with direct activity against the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Two existing antimalarial drugs, pyronaridine and quinacrine, display whole cell SARS-CoV-2 in A549 + ACE2 cells (pretreatment, IC50 = 0.23 0.19 μM, respectively) moderate cytotoxicity (CC50 11.53 9.24 respectively). Moreover, displays vitro PLpro (IC50 1.8 μM). Given their antiviral activity, these compounds are strong candidates for repurposing COVID-19 prompt us to study structure–activity relationship of 9-aminoacridine scaffold using traditional medicinal chemistry identify promising new analogs. Our studies identified several novel analogs possessing potent U2-OS GFP 1-10 1-11 < 1.0 μM) as well > 4.0 Compounds such 7g, 9c, 7e were more active, demonstrating selectivity indices SI 10, 9c displayed strongest ≤ 0.42 CC50 ≥ 4.41 10) among them, indicating that it has potential a lead molecule this series COVID-19.

Язык: Английский

Процитировано

5

Multiple approaches to repurposing drugs for neuroblastoma DOI Creative Commons

Laura Rank,

Ana C. Puhl, Tammy M. Havener

и другие.

Bioorganic & Medicinal Chemistry, Год журнала: 2022, Номер 73, С. 117043 - 117043

Опубликована: Окт. 4, 2022

Язык: Английский

Процитировано

7

Application of Minimal Physiologically-Based Pharmacokinetic Model to Simulate Lung and Trachea Exposure of Pyronaridine and Artesunate in Hamsters DOI Creative Commons
Dong‐Wook Kang, Kyung Min Kim, Ju Hee Kim

и другие.

Pharmaceutics, Год журнала: 2023, Номер 15(3), С. 838 - 838

Опубликована: Март 3, 2023

A fixed-dose combination of pyronaridine and artesunate, one the artemisinin-based therapies, has been used as a potent antimalarial treatment regimen. Recently, several studies have reported antiviral effects both drugs against severe acute respiratory syndrome coronavirus two (SARS-CoV-2). However, there are limited data on pharmacokinetics (PKs), lung, trachea exposures that could be correlated with artesunate. The purpose this study was to evaluate pharmacokinetics, distribution pyronaridine, dihydroartemisinin (an active metabolite artesunate) using minimal physiologically-based pharmacokinetic (PBPK) model. major target tissues for evaluating dose metrics blood, trachea, nontarget were lumped together into rest body. predictive performance PBPK model evaluated visual inspection between observations predictions, (average) fold error, sensitivity analysis. developed models applied multiple-dosing simulation daily oral steady state reached about three four days after first dosing an accumulation ratio calculated 1.8. artesunate not since compounds achieved by multiple dosing. elimination half-life estimated 19.8 0.4 h, respectively. Pyronaridine extensively distributed lung lung-to-blood trachea-to-blood concentration ratios (=Cavg,tissue/Cavg,blood) 25.83 12.41 at state, Also, AUC (dihydroartemisinin) 3.34 (1.51) 0.34 (0.15). results provide scientific basis interpreting dose–exposure–response relationship COVID-19 drug repurposing.

Язык: Английский

Процитировано

4

Arylamines QSAR-Based Design and Molecular Dynamics of New Phenylthiophene and Benzimidazole Derivatives with Affinity for the C111, Y268, and H73 Sites of SARS-CoV-2 PLpro Enzyme DOI Creative Commons
Gianfranco Sabadini, Marco Mellado,

Cesar A. Morales

и другие.

Pharmaceuticals, Год журнала: 2024, Номер 17(5), С. 606 - 606

Опубликована: Май 9, 2024

A non-structural SARS-CoV-2 protein, PLpro, is involved in post-translational modifications cells, allowing the evasion of antiviral immune response mechanisms. In this study, potential PLpro inhibitory drugs were designed using QSAR, molecular docking, and dynamics. combined QSAR equation with physicochemical Free-Wilson descriptors was formulated. The r2, q2, r2test values 0.833, 0.770, 0.721, respectively. From equation, it found that presence an aromatic ring a basic nitrogen atom crucial for obtaining good activity. Then, series structures binding sites C111, Y268, H73 created. best compounds to exhibit pIC50 9.124 docking scoring -14 kcal/mol. stability cavities confirmed by dynamics studies. high number stable contacts interactions over time exhibited aryl-thiophenes Pred14 Pred15, making them candidates.

Язык: Английский

Процитировано

1

Learning from COVID-19: How drug hunters can prepare for the next pandemic DOI
Ana C. Puhl, Thomas R. Lane, Sean Ekins

и другие.

Drug Discovery Today, Год журнала: 2023, Номер 28(10), С. 103723 - 103723

Опубликована: Июль 22, 2023

Язык: Английский

Процитировано

3

Pyronaridine tetraphosphate is an efficacious antiviral and anti-inflammatory active against multiple highly pathogenic coronaviruses DOI Creative Commons
Jeremy Ardanuy, Robert M. Johnson, Carly Dillen

и другие.

mBio, Год журнала: 2023, Номер 14(5)

Опубликована: Авг. 15, 2023

ABSTRACT The coronavirus disease 2019 (COVID-19) pandemic, caused by severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2), continues to be one of the largest dangers human health around world. need for effective antiviral and anti-inflammatory treatments is still extremely high as newly emerging variants threaten efficacy currently used treatment options. Many compounds are at inhibiting SARS-CoV-2 infection in vitro but fail recapitulate that vivo . There a major demand drugs efficacious broadly highly pathogenic coronaviruses including SARS-CoV-2, its close relatives SARS-CoV-1 Middle East (MERS-CoV). One drug with potential join small subset active both orally bioavailable pyronaridine triphosphate, which has now been published show A549 cells K18-hACE2 mouse model, respectively, functioning protease inhibitor papain-like (PLpro). In our studies, resulted significant improvements lung inflammatory pathology, reducing pro-inflammatory cytokine chemokine levels, weight loss seen model associated severity three models, SARS-CoV-1, MERS-CoV. Additionally, we found can safely effectively combined therapeutics molnupiravir nirmatrelvir (main component Paxlovid) there was evidence synergistic effect further reduced viral titers, levels. These results indicate represents an excellent therapeutic candidate COVID-19 individually, or combination other approved antivirals well option such MERS-CoV, future yet emerge. IMPORTANCE Pyronaridine tetraphosphate on WHO Essential Medicine List importance widely available safe malaria. We find across models using multiple viruses responsible previous outbreaks. additively combines current (protease inhibit infections. many demonstrate cellular few this level impact represent promising pandemic outbreaks well.

Язык: Английский

Процитировано

3

Transporter Inhibition Profile for the Antivirals Tilorone, Quinacrine and Pyronaridine DOI Creative Commons
Patricia A. Vignaux, Thomas R. Lane, Ana C. Puhl

и другие.

ACS Omega, Год журнала: 2023, Номер 8(13), С. 12532 - 12537

Опубликована: Март 24, 2023

Pyronaridine, tilorone and quinacrine are cationic molecules that have in vitro activity against Ebola, SARS-CoV-2 other viruses. All three also demonstrated vivo Ebola mice, while pyronaridine showed efficacy mice. We recently tested these antivirals human organic cation transporters (OCTs) apical multidrug toxin extruders (MATEs). Quinacrine was found to be an inhibitor of OCT2, were less potent, displayed variability depending on the substrate used. To assess whether any potential interactions with additional transporters, we now screened them at 10 μM various efflux uptake including P-gp, OATP1B3, OAT1, OAT3, MRP1, MRP2, MRP3, BCRP, as well confirmational testing OCT1, MATE1 MATE2K. Interestingly, this study appears a more potent OCT1 OCT2 than or quinacrine. However, both appear inhibitors None compounds inhibited P-gp OATP1B3. Similarly, previously do not inhibit OATP1B1 confirmed behaves similarly. In total, observations suggest only interact OCTs MATEs differing extents, suggesting they may involved fewer clinically relevant drug-transporter involving pharmaceutical substrates major tested.

Язык: Английский

Процитировано

2

Oral Pyronaridine Tetraphosphate Reduces Tissue Presence of Parasites in a Mouse Model of Chagas Disease DOI Creative Commons
Jair L. Siqueira-Neto, Thomas R. Lane, Jean Bernatchez

и другие.

ACS Omega, Год журнала: 2024, Номер 9(35), С. 37288 - 37298

Опубликована: Авг. 20, 2024

The eukaryotic parasite

Язык: Английский

Процитировано

0