Enhancing food safety and quality: multiplex detection using smart nanostructured molecular logic technologies DOI
Xinru Yu, Hongbin Pu, Da‐Wen Sun

и другие.

Critical Reviews in Food Science and Nutrition, Год журнала: 2024, Номер unknown, С. 1 - 19

Опубликована: Дек. 30, 2024

Multi-target detection technology in food plays a key role the field of analysis, which can comprehensively and accurately assess levels multiple residues food, thus ensuring safety quality. In recent years, smart nanostructured molecular logic technologies (SNMLT) have been widely employed multiplex detection. Of these, component materials-based SNMLT attracted much attention owing to their rapid response, multifunctionality, programmability, high sensitivity. Nevertheless, there is no review focusing on sensing platform for multi-target current review, principles operation classification were first described, followed by summary materials signal output strategies SNMLT. Besides, applications assay, including physical, biological, chemical hazard factors quality also highlighted. Finally, future challenges summarized discussed. The indicates that has advantages wide range, strong anti-interference ability, ability analyze target analytes simultaneously research focus combining with artificial intelligence develop inexpensive easy-to-use devices.

Язык: Английский

Localized Bicirculating DNAzyme Self-Feedback Amplification Strategy for Ultra-Sensitive Fluorescence Biosensing of MicroRNA DOI

Defu Qian,

Jingling Zhang, Qingqing Tan

и другие.

Analytical Chemistry, Год журнала: 2025, Номер unknown

Опубликована: Янв. 13, 2025

DNAzyme-based cascade networks are effective tools to achieve ultrasensitive detection of low-abundance miRNAs. However, their designs complicated and costly, the operation is time-consuming. Herein, a novel simple noncascade DNAzyme network designed its amplification effect comparable or even better than many cascading ones. It nonenzymatic, isothermal, bicirculating consisting two toehold-mediated strand-displacement reactions localized strategy. Taking microRNA-122 as target model, this fluorescence biosensor has limit 84 zmol L–1, which 8-orders magnitude lower that nonamplification one. The ultrasensitivity mainly benefits from exclusive design positive self-feedback mechanism ingenious network. In addition, utilization superparamagnetic Fe3O4@SiO2 particles not only helps for localization DNAzymes but also facilitates rapid separation signal probes (output DNA-CdTe QDs). This fluorescent advantages specificity, speed, thermal stability, low cost. paves new way bioamplification strategy, may be very attractive biosensors, DNA logic gates, computers.

Язык: Английский

Процитировано

2

Modular CRISPR/Cas12a synergistic activation platform for detection and logic operations DOI Creative Commons
Minghao Hu, Xianzhi Cheng, Tongbo Wu

и другие.

Nucleic Acids Research, Год журнала: 2024, Номер 52(12), С. 7384 - 7396

Опубликована: Июнь 3, 2024

Abstract The revolutionary technology of CRISPR/Cas has reshaped the landscape molecular biology and engineering. This tool is interest to researchers in multiple fields, including diagnostics, biochemistry circuits, information storage. As spreads more niche areas, new application scenarios requirements emerge. Developing programmability compatibility becomes a critical issue phase. Here, we report redundancy-based modular CRISPR/Cas12a synergistic activation platform (MCSAP). position, length, concentration redundancy split DNA activators can finely regulate activity Cas12a. With redundant structure as an interface, MCSAP serves plug-in seamlessly integrate with upstream network. successfully performs three different tasks: nucleic acid detection, enzyme logic operation. work effector for networks because its programmability. Our provides powerful yet easy-to-use tools strategies fields nanotechnology, engineering, biology.

Язык: Английский

Процитировано

9

Logic Circuits for Intelligent Microcystin Monitoring Based on Aptamer Recognition and Toehold-Mediated Hairpin DNA Self-Assembly DOI Creative Commons
Jiafeng Pan, Ying Zeng, Yuyan Wang

и другие.

Analytical Chemistry, Год журнала: 2025, Номер unknown

Опубликована: Янв. 17, 2025

A sensitive fluorescence biosensor was developed for microcystin-LR (MC-LR) detection using H1, H2, and H3 DNA probes as sensing elements. The aptamer in H1 can recognize the target. H2 labeled with FAM BHQ. MC-LR binding will activate self-assemblies through toehold-mediated strand displacement. In formed products (MC-LR/H1/nH2/nH3), BHQ be separated a high signal observed assay. is limit of 53 fM. We further constructed several logic circuits (AND-AND cascaded circuit, feedforward resource allocation circuit) MC-LR, MC-LA, MC-YR three inputs. numbers 0 1 are used to code input output signals. AND-AND cascade circuit produce only (111) combination. MC-LA signals, inhibit self-assembly execute negative operation. Through rational design probe hybridizations on four different magnetic beads (MBs), achieve an intelligent information. Our proposed not provide platform microcystin but also serve smart system sensing.

Язык: Английский

Процитировано

1

Engineering fluorescence of guanine-activated Ag nanocluster to illuminate label-free, simplified and efficient logic circuits with minimal strand migration DOI
Jiayang He,

Kexin Hu,

Long Min

и другие.

Chemical Engineering Journal, Год журнала: 2025, Номер unknown, С. 159869 - 159869

Опубликована: Янв. 1, 2025

Язык: Английский

Процитировано

0

Exploration and Application of the Catalytic Superiority of Non-G-Quadruplex Hemin Aptamers DOI
Changjiang Li, Xiaolong Li, Shichao Wei

и другие.

Analytical Chemistry, Год журнала: 2025, Номер unknown

Опубликована: Фев. 5, 2025

A newly identified hemin aptamer with a non-G-quadruplex structure exhibits stronger peroxidase activity and selectivity than traditional G-quadruplex/hemin DNAzymes, addressing challenges such as weak binding, low catalytic activity, poor selectivity. In this study, we optimized ion activation conditions, refined reaction parameters, developed spontaneous recombination method via splitting to enhance DNAzyme enable regulation. The demonstrated superior performance in enzyme-free sensing, polymerase-assisted amplification, CRISPR/Cas12a systems, achieving higher sensitivity improved colorimetric thresholds compared G-quadruplexes. We have also comprehensive operational guide for aptamer/hemin which is poised revolutionize sensor signal generation elements.

Язык: Английский

Процитировано

0

Molecular Circuit-Controlled Nanoparticle Folders for Programmable DNA Information Access DOI
Ranfeng Wu, Yongpeng Zhang,

Jiongjiong Teng

и другие.

ACS Nano, Год журнала: 2025, Номер unknown

Опубликована: Фев. 13, 2025

DNA storage has become an attractive alternative to long-term, stable digital data because of its high density and strong stability. Recently, numerous efforts have been made develop access methods improve the efficiency accuracy molecular reading. However, most current were achieved by well-developed polymerase chain reaction (PCR) hybridization, which lack exploration dynamic programmable operations for access. Here, we propose a strategy in nanoparticle folders are controlled DNAzyme circuits achieve specific information manipulation. We experimentally demonstrate three kinds circuit programs that YES, AND, OR logic manner. In addition, selective was performed using obtain target from pool. Importantly, extended circuit-controlled framework multiple manipulation modes, demonstrating four manipulations on two AuNP different demand. The provides paradigm integrated computing systems more applications fields computation storage.

Язык: Английский

Процитировано

0

Dual-mode DNA nano-stage biosensing platform for efficient detection of uracil-DNA glycosylase activity in cells DOI

Dandan Hu,

Yanhong Ye,

Qianlin Zhu

и другие.

Bioelectrochemistry, Год журнала: 2025, Номер 165, С. 108950 - 108950

Опубликована: Фев. 26, 2025

Язык: Английский

Процитировано

0

A CHA amplifier assisted DNA logical circuits for accurate diagnosis of acute myocardial infarction DOI

Chan Yang,

Huan Ou,

Yanling Zhao

и другие.

Sensors and Actuators B Chemical, Год журнала: 2024, Номер 417, С. 136063 - 136063

Опубликована: Июнь 2, 2024

Язык: Английский

Процитировано

3

Time‐Controlled Authentication Strategies for Molecular Information Transfer DOI
Minghao Hu, Mengyao Yang, Xianzhi Cheng

и другие.

Small, Год журнала: 2024, Номер unknown

Опубликована: Апрель 26, 2024

Abstract Modern cryptography based on computational complexity theory is mainly constructed with silicon‐based circuits. As DNA nanotechnology penetrates the molecular domain, utilizing for data access protection in biomolecular domain becomes a unique approach to information security. However, building security devices and strategies robust compatibility still challenging. Here, this study reports time‐controlled authentication strategy using DNAzyme strand displacement as basic framework. A time limit exists authorization access, spontaneous shutdown design further protects secure access. Multiple hierarchical authentications, temporal Boolean logic authentication, enzyme are networks'good programmability. This gives proof of concept detection bioinformation about single nucleotide variants miRNA, highlighting their potential biosensing protection.

Язык: Английский

Процитировано

2

Design of enhanced entropy-driven non-covalent DNA catalytic reactions via the paired junction structure DOI
Weitao Wang, Hongyan Yu, Xiaole Han

и другие.

Chemical Engineering Journal, Год журнала: 2024, Номер 498, С. 155509 - 155509

Опубликована: Сен. 6, 2024

Язык: Английский

Процитировано

1