The secret life of insect-associated microbes and how they shape insect–plant interactions DOI Creative Commons
Silvia Coolen,

Magda Rogowska-van der Molen,

Cornelia U. Welte

и другие.

FEMS Microbiology Ecology, Год журнала: 2022, Номер 98(9)

Опубликована: Июль 13, 2022

Abstract Insects are associated with a plethora of different microbes which we only starting to understand their role in shaping insect–plant interactions. Besides directly benefitting from symbiotic microbial metabolism, insects obtain and transmit within environment, making them ideal vectors potential beneficiaries plant diseases that alter defenses. To prevent damage, plants elicit stress-specific defenses ward off microbiota. However, both harbor wealth adaptations allow circumvent effective defense activation. In the past decades, it has become apparent enormous diversity metabolic insect-associated may play far more important interactions than previously anticipated. The latter have implications for development sustainable pest control strategies. Therefore, this review sheds light on current knowledge multitrophic insect–microbe–plant rapidly expanding field research.

Язык: Английский

Ecology and genomics of Actinobacteria: new concepts for natural product discovery DOI
Doris A. van Bergeijk, Barbara R. Terlouw, Marnix H. Medema

и другие.

Nature Reviews Microbiology, Год журнала: 2020, Номер 18(10), С. 546 - 558

Опубликована: Июнь 1, 2020

Язык: Английский

Процитировано

321

Mass spectrometry-based metabolomics in microbiome investigations DOI
Anelize Bauermeister, Helena Mannochio-Russo, Letícia V. Costa‐Lotufo

и другие.

Nature Reviews Microbiology, Год журнала: 2021, Номер 20(3), С. 143 - 160

Опубликована: Сен. 22, 2021

Язык: Английский

Процитировано

319

Streptomyces: The biofactory of secondary metabolites DOI Creative Commons
Khorshed Alam,

Arpita Mazumder,

Suranjana Sikdar

и другие.

Frontiers in Microbiology, Год журнала: 2022, Номер 13

Опубликована: Сен. 29, 2022

Natural products derived from microorganisms serve as a vital resource of valuable pharmaceuticals and therapeutic agents. Streptomyces is the most ubiquitous bacterial genus in environments with prolific capability to produce diverse natural significant biological activities medicine, environments, food industries, agronomy sectors. However, many remain unexplored among . It exigent develop novel antibiotics, agrochemicals, anticancer medicines, etc., due fast growth resistance cancer chemotherapeutics, pesticides. This review article focused secreted by their function importance curing diseases agriculture. Moreover, it discussed genomic-driven drug discovery strategies also gave future perspective for development

Язык: Английский

Процитировано

195

Streptomyces from traditional medicine: sources of new innovations in antibiotic discovery DOI
Gerry A. Quinn,

Aiya M. Banat,

Alyaa Abdelhameed

и другие.

Journal of Medical Microbiology, Год журнала: 2020, Номер 69(8), С. 1040 - 1048

Опубликована: Июль 21, 2020

Given the increased reporting of multi-resistant bacteria and shortage newly approved medicines, researchers have been looking towards extreme unusual environments as a new source antibiotics.

Язык: Английский

Процитировано

184

Microbial Natural Products in Drug Discovery DOI Open Access
Ahmed S. Abdel‐Razek,

Mehrez E. El‐Naggar,

Ahmed A. Allam

и другие.

Processes, Год журнала: 2020, Номер 8(4), С. 470 - 470

Опубликована: Апрель 16, 2020

Over a long period of time, humans have explored many natural resources looking for remedies various ailments. Traditional medicines played an intrinsic role in human life thousands years, with people depending on medicinal plants and their products as dietary supplements well using them therapeutically treatment chronic disorders, such cancer, malaria, diabetes, arthritis, inflammation, liver cardiac disorders. However, plant are not sufficient recently emerging diseases. In addition, the seasonal availability other political factors put constrains some rare species. The actual breakthrough drug discovery came concurrently penicillin from Penicillium notatum 1929. This dramatically changed research positioned microbial one most important clues due to availability, variability, great biodiversity, unique structures, bioactivities produced. number commercially available active compounds sources date exceeds those discovered sources. this review, we introduce short history certain features recent approaches, specifying origin, featured molecules, diversity producing Moreover, discuss new approaches trends field.

Язык: Английский

Процитировано

167

Actinobacteria in natural products research: Progress and prospects DOI Creative Commons

Polpass Arul Jose,

Anjisha Maharshi, Bhavanath Jha

и другие.

Microbiological Research, Год журнала: 2021, Номер 246, С. 126708 - 126708

Опубликована: Янв. 22, 2021

Язык: Английский

Процитировано

164

Diversity and functional landscapes in the microbiota of animals in the wild DOI Creative Commons
Doron Levin, Neta Raab, Yishay Pinto

и другие.

Science, Год журнала: 2021, Номер 372(6539)

Опубликована: Март 25, 2021

Animals in the wild are able to subsist on pathogen-infected and poisonous food show immunity various diseases. These may be due their microbiota, yet we have a poor understanding of animal microbial diversity function. We used metagenomics analyze gut microbiota more than 180 species wild, covering diverse classes, feeding behaviors, geographies, traits. Using de novo metagenome assembly, constructed functionally annotated database 5000 genomes, comprising 1209 bacterial which 75% unknown. The composition, diversity, functional content exhibit associations with taxonomy, diet, activity, social structure, life span. identify animals as largely untapped resource for discovery therapeutics biotechnology applications.

Язык: Английский

Процитировано

155

A marine microbiome antifungal targets urgent-threat drug-resistant fungi DOI
Fan Zhang, Miao Zhao,

Doug R. Braun

и другие.

Science, Год журнала: 2020, Номер 370(6519), С. 974 - 978

Опубликована: Ноя. 20, 2020

New antifungal drugs are urgently needed to address the emergence and transcontinental spread of fungal infectious diseases, such as pandrug-resistant Candida auris. Leveraging microbiomes marine animals cutting-edge metabolomics genomic tools, we identified encouraging lead molecules with in vivo efficacy. The most promising lead, turbinmicin, displays potent vitro mouse-model efficacy toward multiple-drug-resistant pathogens, exhibits a wide safety index, functions through fungal-specific mode action, targeting Sec14 vesicular trafficking pathway. efficacy, safety, action distinct from other make turbinmicin highly drug help devastating global pathogens C.

Язык: Английский

Процитировано

144

A roadmap for metagenomic enzyme discovery DOI Creative Commons
Serina L. Robinson,

Jörn Piel,

Shinichi Sunagawa

и другие.

Natural Product Reports, Год журнала: 2021, Номер 38(11), С. 1994 - 2023

Опубликована: Янв. 1, 2021

Covering: up to 2021Metagenomics has yielded massive amounts of sequencing data offering a glimpse into the biosynthetic potential uncultivated microbial majority. While genome-resolved information about communities from nearly every environment on earth is now available, ability accurately predict biocatalytic functions directly remains challenging. Compared primary metabolic pathways, enzymes involved in secondary metabolism often catalyze specialized reactions with diverse substrates, making these pathways rich resources for discovery new enzymology. To date, functional insights gained studies environmental DNA (eDNA) have largely relied PCR- or activity-based screening eDNA fragments cloned fosmid cosmid libraries. As an alternative, shotgun metagenomics holds underexplored by avoiding common biases introduced through activity-guided workflows. However, inferring enzyme similar searching 'needle haystack' without direct links between genotype and phenotype. The goal this review provide roadmap navigate metagenomic identify candidate enzymes. We cover both computational experimental strategies mine metagenomes explore protein sequence space spotlight natural product biosynthesis. Specifically, we compare

Язык: Английский

Процитировано

122

Streptomyces: Still the Biggest Producer of New Natural Secondary Metabolites, a Current Perspective DOI Creative Commons
Lavinia Donald, Atanas Pipite, Ramesh Subramani

и другие.

Microbiology Research, Год журнала: 2022, Номер 13(3), С. 418 - 465

Опубликована: Июль 1, 2022

There is a real consensus that new antibiotics are urgently needed and the best chance for combating antibiotic resistance. The phylum Actinobacteria one of main producers antibiotics, with recent paradigm shift whereby rare actinomycetes have been increasingly targeted as source secondary metabolites discovery antibiotics. However, this review shows genus Streptomyces still largest current producer innovative metabolites. Between January 2015 December 2020, significantly high number novel spp. isolated from different environments, including extreme symbionts, terrestrial soils, sediments also marine mainly invertebrates sediments. This highlights 135 species during 6-year period 108 environment 27 sources. A brief summary pre-treatment methods used successful isolation some discussed, well biological activities total 279 recorded 121 which exhibit diverse activity. greatest originated terrestrial-sourced

Язык: Английский

Процитировано

119