SARS-CoV-2 JN.1 variant evasion of IGHV3-53/3-66 B cell germlines
Science Immunology,
Год журнала:
2024,
Номер
9(98)
Опубликована: Авг. 9, 2024
The
severe
acute
respiratory
syndrome
coronavirus
2
variant
JN.1
recently
emerged
as
the
dominant
despite
having
only
one
amino
acid
change
on
spike
(S)
protein
receptor
binding
domain
(RBD)
compared
with
ancestral
BA.2.86,
which
never
represented
more
than
5%
of
global
variants.
To
define
at
molecular
level
ability
to
spread
globally,
we
interrogated
a
panel
899
neutralizing
human
monoclonal
antibodies.
Our
data
show
that
single
leucine-455-to-serine
mutation
in
RBD
unleashed
JN.1,
likely
occurring
by
elimination
70%
antibodies
mediated
IGHV3-53/3-66
germlines.
However,
resilience
class
3
low
neutralization
potency
but
strong
Fc
functions
may
explain
absence
disease.
Язык: Английский
From Detection to Protection: Antibodies and Their Crucial Role in Diagnosing and Combatting SARS-CoV-2
Vaccines,
Год журнала:
2024,
Номер
12(5), С. 459 - 459
Опубликована: Апрель 25, 2024
Understanding
the
antibody
response
to
SARS-CoV-2,
virus
responsible
for
COVID-19,
is
crucial
comprehending
disease
progression
and
significance
of
vaccine
therapeutic
development.
The
emergence
highly
contagious
variants
poses
a
significant
challenge
humoral
immunity,
underscoring
necessity
grasping
intricacies
specific
antibodies.
This
review
emphasizes
pivotal
role
antibodies
in
shaping
immune
responses
their
implications
diagnosing,
preventing,
treating
SARS-CoV-2
infection.
It
delves
into
kinetics
characteristics
explores
current
antibody-based
diagnostics,
discussing
strengths,
clinical
utility,
limitations.
Furthermore,
we
underscore
potential
SARS-CoV-2-specific
antibodies,
various
therapies
such
as
monoclonal
polyclonal
anti-cytokines,
convalescent
plasma,
hyperimmunoglobulin-based
therapies.
Moreover,
offer
insights
vaccines,
emphasizing
neutralizing
order
confer
immunity
along
with
emerging
concern
(VOCs)
circulating
Omicron
subvariants.
We
also
highlight
challenges
field,
risks
antibody-dependent
enhancement
(ADE)
shed
light
on
associated
original
antigenic
sin
(OAS)
effect
long
COVID.
Overall,
this
intends
provide
valuable
insights,
which
are
advancing
sensitive
diagnostic
tools,
identifying
efficient
therapeutics,
developing
effective
vaccines
combat
evolving
threat
global
scale.
Язык: Английский
Population immunity enhances the evolution of SARS-CoV-2 in Beijing revealed by wastewater genomic surveillance
Water Research,
Год журнала:
2025,
Номер
282, С. 123649 - 123649
Опубликована: Апрель 14, 2025
Язык: Английский
Computational Modeling of the Scenario of Resumption of Covid-19 Waves under Pulse Evolution in New Omicron Lines
Technical Physics Letters,
Год журнала:
2024,
Номер
unknown
Опубликована: Июль 10, 2024
Язык: Английский
Structural Basis for Evasion of New SARS-CoV-2 Variants from the Potent Virus-Neutralizing Nanobody Targeting the S-Protein Receptor-Binding Domain
Biochemistry (Moscow),
Год журнала:
2024,
Номер
89(7), С. 1260 - 1272
Опубликована: Июль 1, 2024
Abstract
COVID-19
has
caused
millions
of
deaths
and
many
times
more
infections
worldwide,
emphasizing
the
unpreparedness
global
health
system
in
face
new
key
role
for
vaccines
therapeutics,
including
virus-neutralizing
antibodies,
prevention
containment
disease.
Continuous
evolution
SARS-CoV-2
coronavirus
been
causing
its
variants
to
evade
action
immune
system,
which
highlighted
importance
detailed
knowledge
epitopes
already
selected
potent
antibodies.
A
single-chain
antibody
(“nanobody”)
targeting
receptor-binding
domain
(RBD),
clone
P2C5,
had
exhibited
robust
activity
against
all
and,
being
a
major
component
anti-COVID-19
formulation
“GamCoviMab”,
successfully
passed
Phase
I
clinical
trials.
However,
after
emergence
Delta
XBB
variants,
decrease
neutralizing
this
nanobody
was
observed.
Here
we
report
on
successful
crystal
structure
determination
RBD:P2C5
complex
at
3.1
Å,
revealed
intricate
protein–protein
interface,
sterically
occluding
full
ACE2
receptor
binding
by
P2C5-neutralized
RBD.
Moreover,
developed
interface
centered
around
residues
Leu452
Phe490,
thereby
explaining
evasion
or
Omicron
XBB,
but
not
B.1.1.529
variant,
as
result
single
L452R
F490S
mutations,
respectively,
from
P2C5.
The
obtained
is
expected
foster
engineering
order
rescue
neutralization
will
facilitate
epitope
mapping
other
nanobodies
competition
assays.
Язык: Английский
Concerted deletions eliminate a neutralizing supersite in SARS-CoV-2 BA.2.87.1 spike
Structure,
Год журнала:
2024,
Номер
32(10), С. 1594 - 1602.e6
Опубликована: Авг. 22, 2024
Summary
BA.2.87.1
represents
a
major
shift
in
the
BA.2
lineage
of
severe
acute
respiratory
syndrome
coronavirus
2
(SARS-CoV-2)
and
is
unusual
having
two
lengthy
deletions
polypeptide
spike
(S)
protein,
one
which
removes
beta-strand.
Here
we
investigate
its
neutralization
by
variety
sera
from
infected
vaccinated
individuals
determine
ectodomain
structure.
The
receptor
binding
domain
(RBD)
structurally
conserved
RBDs
are
tightly
packed
an
"all-down"
conformation
with
small
rotation
relative
to
trimer
axis
as
compared
closest
previously
observed
conformation.
N-terminal
(NTD)
maintains
remarkably
similar
structure
overall;
however,
rearrangements
resulting
essentially
destroy
so-called
supersite
epitope
eliminate
glycan
site,
while
mutation
creates
additional
effectively
shielding
another
NTD
epitope.
relatively
easily
neutralized
but
acquisition
mutations
RBD
could
increase
antibody
escape
allowing
it
become
dominant
sub-lineage.
Язык: Английский
A Retrospective Claims Data Analysis on the Burden of COVID-19-Related Hospitalization in Adults at High Risk for Severe Disease Progression in Germany
T Stremel,
S Schnaidt,
Nicole Bihrer
и другие.
Infectious Diseases and Therapy,
Год журнала:
2024,
Номер
unknown
Опубликована: Дек. 8, 2024
Individuals
at
increased
risk
of
severe
coronavirus
disease
2019
(COVID-19)
progression
have
a
higher
probability
being
hospitalized.
Nirmatrelvir/ritonavir
(NMV/r)
is
an
antiviral
drug
aiming
to
prevent
courses.
Our
study
aimed
assess
the
resource
utilization
and
costs
adults
hospitalized
for
COVID-19
high
progression.
A
retrospective
was
conducted
using
German
claims
data.
The
presence
high-risk
criteria
determined
through
recorded
diagnoses,
operations,
procedures,
prescriptions.
progression,
primarily
COVID-19,
required
diagnosis
additionally
sepsis,
pulmonary
embolism,
acute
respiratory
failure,
pneumonia,
or
remdesivir
prescription.
Patients
were
grouped
by
eligibility
NMV/r
treatment
(eligible,
eligible
with
restrictions,
not
eligible).
outcomes
interest
reported
timeframe
last
dominant
virus
variant
available
in
database,
i.e.,
Delta
(June
21,
2021
December
31,
2021).
Of
approximately
3.7
million
individuals
continuously
observable
about
60%
identified
as
Among
individuals,
2938
patients
between
June
2021,
two-thirds
which
suitable
(half
without
restrictions).
Advanced
age
(86.3%)
cardiovascular
conditions
(83.9%)
most
prevalent
predefined
factors.
Identified
stayed,
on
average,
11.3
days
hospital,
inpatient
mortality
18.9%.
These
COVID-19-related
hospitalizations
resulted
mean
healthcare
€8728.
This
reflects
economic
burden
adult
from
payer's
perspective
Germany.
findings
highlight
need
courses
associated
relieve
systems
regarding
allocation.
Язык: Английский