FAN1 controls mismatch repair complex assembly via MLH1 retention to stabilize CAG repeat expansion in Huntington’s disease DOI Creative Commons

Robert Goold,

Joseph Hamilton, Thomas Menneteau

и другие.

Cell Reports, Год журнала: 2021, Номер 36(9), С. 109649 - 109649

Опубликована: Авг. 1, 2021

CAG repeat expansion in the HTT gene drives Huntington's disease (HD) pathogenesis and is modulated by DNA damage repair pathways. In this context, interaction between FAN1, a DNA-structure-specific nuclease, MLH1, member of mismatch pathway (MMR), not defined. Here, we identify highly conserved SPYF motif at N terminus FAN1 that binds to MLH1. Our data support model where has two distinct functions stabilize repeats. On one hand, it MLH1 restrict its recruitment MSH3, thus inhibiting assembly functional MMR complex would otherwise promote expansion. other promotes accurate via nuclease activity. These highlight potential avenue for HD therapeutics attenuating somatic

Язык: Английский

Protein interaction networks in neurodegenerative diseases: From physiological function to aggregation DOI Creative Commons
Gaetano Calabrese, Cristen Molzahn, Thibault Mayor

и другие.

Journal of Biological Chemistry, Год журнала: 2022, Номер 298(7), С. 102062 - 102062

Опубликована: Май 25, 2022

The accumulation of protein inclusions is linked to many neurodegenerative diseases that typically develop in older individuals, due a combination genetic and environmental factors. In rare familial disorders, genes encoding for aggregation-prone proteins are often mutated. While the underlying mechanism leading these still remains be fully elucidated, efforts past 20 years revealed vast network protein–protein interactions play major role regulating aggregation key associated with neurodegeneration. Misfolded can oligomerize form insoluble aggregates associate molecular chaperones other elements proteolytic machineries frontline workers attempting protect cells by promoting clearance preventing aggregation. Proteins normally bound become sequestered mislocalized inclusions, their loss function. contrast, mutations, posttranslational modifications, or misfolding lead gain function inducing novel altered interactions, which turn impact numerous essential cellular processes organelles, such as vesicle trafficking mitochondria. This review examines our current knowledge involving several Alzheimer's disease, Parkinson's Huntington's amyotrophic lateral sclerosis. We aim provide an overview interaction networks central driving mitigating inclusion formation, while highlighting some proteomic studies helped uncover extent networks. Neurodegenerative (NDs) complex multifactorial pathology, result progressive damage neuronal connectivity, ultimately impaired mobility and/or cognition. Protein oligomerization gives rise extracellular intracellular common hallmark NDs. Further spreading amyloid nervous system–similar prion-based infections, hence referred prion-like mechanism–is thought element etiology NDs (1Goedert M. NEURODEGENERATION. diseases: prion concept relation assembled Abeta, tau, alpha-synuclein.Science. 2015; 349: 1255555Crossref PubMed Scopus (552) Google Scholar). few decades, biochemical causes were uncovered, distinction between rarer forms, where disease-causing mutations genetically inherited, more sporadic risk factors drive pathogenesis (2Bertram L. Tanzi R.E. epidemiology disease.J. Clin. Invest. 2005; 115: 1449-1457Crossref (444) both cases, affected found enriched pathological aggregates, highlights importance manifestation disease. However, despite accumulated clinical trials attempts made alleviate aggregation, date no therapeutic strategy has been broadly accepted cure any led scientists question whether really ND mere (3Walsh D.M. Selkoe D.J. A critical appraisal pathogenic spread hypothesis neurodegeneration.Nat. Rev. Neurosci. 2016; 17: 251-260Crossref (189) Scholar, 4Makin S. on trial.Nature. 2018; 559: S4-S7Crossref Nonetheless, collectively, work decades generated understanding how each engages pathways. this review, we intricate connections bringing together core findings recent discoveries.For ND, different sets mutated brain regions cell types initially affected. For example, disease (HD) spinocerebellar ataxia type 1 (SCA1) expansion CAG repeat huntingtin (HTT) ataxin (ATXN1) genes, respectively, resulting unusually long polyglutamine (polyQ) tract very prone deposits striatal neurons (5Ross C.A. Tabrizi S.J. disease: from treatment.Lancet Neurol. 2011; 10: 83-98Abstract Full Text PDF (1062) 6Orr H.T. Zoghbi H.Y. SCA1 genetics: history 13 year collaboration against glutamines.Hum. Mol. Genet. 2001; 2307-2311Crossref (AD), two observed. aberrant cleavage products transmembrane amyloid-β (Aβ) precursor (APP) plaque temporal parietal regions, tau (MAPT) accumulates intracellularly, neurofibrillary tangles (7Selkoe Hardy J. at 25 years.EMBO Med. 8: 595-608Crossref (2881) Parkinsonś (PD), primarily area substantia nigra (SN), α-synuclein (α-syn; SNCA) accumulate dopaminergic (8Poewe W. Seppi K. Tanner C.M. Halliday G.M. Brundin P. Volkmann et al.Parkinson disease.Nat. Dis. Primers. 2017; 3: 17013Crossref (1086) ALS, superoxide dismutase (SOD1), RNA-binding FUS (FUsed Sarcoma), TAR-DNA–binding 43 (TDP-43) have identified motor primary cortex, brainstem, spinal cord (9Foerster B.R. Welsh R.C. Feldman E.L. neuroimaging sclerosis.Nat. 2013; 9: 513-524Crossref (49) It therefore important consider independently context most Note, will mostly use short names whenever gene corresponding italicized name also indicated brackets if it name.Protein disease-associated facilitated posttranslation modifications (e.g., phosphorylation cleavage) avert formation native structure, cases seemingly occur sporadically, without yet clear explanation. Aggregation first initiated seed or/and oligomer, sequence-specific misfolded interact adopt non-native conformation, then convert into toxic form. leads fibrils distinctive β-sheet structure arise when soluble oligomers begin assemble small protofibrils (10Iadanza M.G. Jackson M.P. Hewitt E.W. Ranson N.A. Radford S.E. new era structures Cell Biol. 19: 755-773Crossref (0) When converted longer larger visible light microscopy. Recently, proposed may favored liquid–liquid phase separation (11Mathieu C. Pappu R.V. Taylor J.P. Beyond aggregation: transitions disease.Science. 2020; 370: 56-60Crossref (78) Scholar) (Box 1). Moreover, now evident there polymorphs vitro vivo (polymorph term used indicate capacity polypeptide generate structures) (12Petkova A.T. Leapman R.D. Guo Z. Yau W.M. Mattson Tycko R. Self-propagating, molecular-level polymorphism beta-amyloid fibrils.Science. 307: 262-265Crossref (1401) 13Fitzpatrick A.W.P. Falcon B. He Murzin A.G. Murshudov G. Garringer H.J. al.Cryo-EM filaments disease.Nature. 547: 185-190Crossref (932) Scholar).Box 1Liquid–liquid separationConventional mechanisms disease-related proceed through oligomerization. increasing attention given (LLPS) process. Phase-separated droplets concentrated environment process accelerated. LLPS occurs molecules solution stronger than entropic cost demixing overcome condensed formed (393Banani S.F. Lee H.O. Hyman A.A. Rosen M.K. Biomolecular condensates: organizers biochemistry.Nat. 18: 285-298Crossref (1864) Beginning P granules, membraneless organelles (MLOs) shown exhibit liquid-like properties exchanging components surrounding environment, deforming under sheer force fusing (394Brangwynne C.P. Eckmann C.R. Courson D.S. Rybarska A. Hoege Gharakhani al.Germline granules liquid localize controlled dissolution/condensation.Science. 2009; 324: 1729-1732Crossref (1339) 395Weber S.C. Brangwynne Inverse size scaling nucleolus concentration-dependent transition.Curr. 25: 641-646Abstract (168) 396Wippich F. Bodenmiller Trajkovska Wanka Aebersold Pelkmans Dual specificity kinase DYRK3 couples stress granule condensation/dissolution mTORC1 signaling.Cell. 152: 791-805Abstract (351) MLOs LLPS. crucial processes, changes phase-separated ability separate emerging property proteins. Over time, separated mature solid, glass-like states (397Shin Y. Berry Pannucci N. Haataja Toettcher J.E. Spatiotemporal control using light-activated optoDroplets.Cell. 168: 159-171.e114Abstract (356) vitrified state consists thioflavin-positive discussed here. Phase presence polyanionic T-cell antigen (TIA1) (398Ambadipudi Biernat Riedel D. Mandelkow E. Zweckstetter Liquid-liquid microtubule-binding repeats Alzheimer-related Tau.Nat. Commun. 275Crossref (309) 399Ash P.E.A. Lei Shattuck Boudeau Carlomagno Medalla al.TIA1 potentiates promotes generation oligomeric tau.Proc. Natl. Acad. Sci. U. 2021; 118e2014188118Crossref (22) Phosphorylation promote its accelerate conversion solid eventually forming thioflavin-T–positive 400Wegmann Eftekharzadeh Tepper Zoltowska K.M. Bennett Dujardin al.Tau liquid-liquid initiate aggregation.EMBO 37e98049Crossref (369) 401Boyko Surewicz W.K. Regulatory fibrillation conditions separation.Proc. 117: 31882-31890Crossref (27) phase-separation α-syn requires nonphysiological periods time (402Sawner A.S. Ray Yadav Mukherjee Panigrahi Poudyal al.Modulating alpha-synuclein separation.Biochemistry. 60: 3676-3696Crossref (7) localizes negatively charged C-terminal domain positively proline-rich region (403Siegert Rankovic Favretto Ukmar-Godec T. Strohaker Becker al.Interplay separation.Protein 30: 1326-1336Crossref (11) link neurodegeneration particularly case implicated. MLOs, structural intrinsically disorder (IDRs) granules. IDRs RNA influence morphology dynamics protein–RNA (404Boeynaems Holehouse Weinhardt V. Kovacs Van Lindt Larabell al.Spontaneous forces give protein-RNA condensates coexisting phases material properties.Proc. 2019; 116: 7889-7898Crossref (174) ALS-associated low-complexity domains FUS, TIA1, heterogeneous nuclear ribonucleoprotein A1 (hnRNPA1), TDP-43 transition (405Murakami Qamar Lin J.Q. Schierle G.S. Rees Miyashita al.ALS/FTD mutation-induced reversible hydrogels irreversible impairs RNP function.Neuron. 88: 678-690Abstract (465) 406Patel Jawerth Maharana Jahnel Hein M.Y. al.A liquid-to-solid ALS accelerated mutation.Cell. 162: 1066-1077Abstract (1272) 407Lin Protter Parker maturation proteins.Mol. Cell. 208-219Abstract (835) 408Molliex Temirov Coughlin Kanagaraj A.P. Kim al.Phase low complexity assembly drives fibrillization.Cell. 163: 123-133Abstract (1219) 409Conicella A.E. Zerze G.H. Mittal Fawzi N.L. disrupt mediated alpha-helical domain.Structure. 24: 1537-1549Abstract (382) 410Mackenzie I.R. Nicholson A.M. Sarkar Messing Purice M.D. Pottier sclerosis frontotemporal dementia alter dynamics.Neuron. 95: 808-816.e809Abstract (328) These pathology disrupting functions trapping translational machinery Low-complexity characteristic HTT separates weak hydrophobic polyQ (411Peskett T.R. Rau O'Driscoll Patani Lowe A.R. Saibil H.R. Exon1 aggregation.Mol. 70: 588-601.e586Abstract (130) 412Aktar Burudpakdee Polanco Pei Swayne T.C. Lipke P.N. al.The dynamic compartment.Life Alli. 2e201900489PubMed With length, quickly lower concentration. structures. Interestingly, profilin interacts reduces separate, well reduced rate fibril (413Posey Ruff Harmon T.S. Crick S.L. Li Diamond M.I. al.Profilin N-terminal fragments preferentially binding monomers oligomers.J. Chem. 293: 3734-3746Abstract (61) PPIs behavior intertwined potentially neurodegeneration.Protein cause series deleterious events cell. First, aggregated affect (PPIs) natively folded protein. interacting coaggregate. later, main known briefly discuss physiological relevance. underline disease-specific PPIs, especially aggregation.In addition, species mediate engage would not (14Schaefer M.H. Wanker E.E. Andrade-Navarro M.A. Evolution CAG/polyglutamine protein-protein networks.Nucl. Acids Res. 2012; 40: 4273-4287Crossref Notably, acute chronic exposure unraveling buried, hydrophobic, even unrelated proteins, thereby coaggregation polypeptides (15Olzscha H. Schermann S.M. Woerner A.C. Pinkert Hecht Tartaglia G.G. al.Amyloid-like sequester metastable functions.Cell. 144: 67-78Abstract (496) gained perturb normal instance, all reviewed form, mitochondrial disrupted perturbations detail chapter centrality ND. addition interfering membranes, exacerbate cytotoxicity 16Kayed Head Thompson J.L. McIntire T.M. Milton Cotman C.W. al.Common implies pathogenesis.Science. 2003; 300: 486-489Crossref (3379) As aggregating arranged polymorphs, differentially, depending propagate components. dictate conformation favored, could (17Peng Gathagan R.J. Covell Medellin Stieber Robinson al.Cellular milieu imparts distinct strains alpha-synucleinopathies.Nature. 557: 558-563Crossref (288) Scholar).To deal challenges posed human developed coping largely rely homeostasis network. Molecular maintain (a.k.a. proteostasis) facilitating folding disaggregation, targeting degradation (18Klaips C.L. Jayaraj Hartl F.U. Pathways proteostasis aging 217: 51-63Crossref (337) Different pathways eliminate directing them either ubiquitin–proteasome lysosomal system. Furthermore, displays protective noncytotoxic, less toxic, lowering smaller via sequestration (19Lansbury P.T. Lashuel H.A. century-old debate enters clinic.Nature. 2006; 443: 774-779Crossref Nevertheless, described previously extend quality itself. effects reducing pool available functions, impairing proteasome exacerbating (20Keck Nitsch Grune Ullrich O. Proteasome inhibition paired helical filament-tau brains patients Neurochem. 85: 115-122Crossref 21Guo Q. Lehmer Martinez-Sanchez Rudack Beck Hartmann al.In Situ C9orf72 poly-GA reveals recruitment.Cell. 172: 696-705.e612Abstract (201) Understanding during progression reveal strategies treatment NDs.The functional characterization so far proven challenge. elucidated. contributing modifiers ND-causing poorly understood. Few systematically analyzed similarities causing Therefore, decided work, interrogating PPI (PINs) around carefully examining mitochondria, order general view determine commonalities diseases.Building networksIdentification was guided initial immunochemistry. elucidation targeted approaches—customarily assessing coimmunoprecipitation—still represents large portion related unbiased searches better partners driven yeast two-hybrid (Y2H) method, technique emerged over ago. Advances identification methodologies 2 including improvement mass spectrometry instrumentation, further unraveled PINs, providing additional insights involved Major contributions PINs come proteomics coimmunoprecipitation experiments, commonly affinity purification (AP-MS) 2), proximity-labeling approaches 3) becoming increasingly popular.Box 2Affinity spectrometryAffinity refers enrichment isolation particular (i.e., bait) prey) method (414Gingras Gstaiger Raught Analysis complexes spectrometry.Nat. 2007; 645-654Crossref (540) 415Smits A.H. Vermeulen Characterizing spectrometry: opportunities.Trends Biotechnol. 34: 825-834Abstract done exogenous expression bait fused tag immunoprecipitation endogenous specific antibody. Antibodies immobilized resins magnetic agarose beads exposed lysates followed retrieval washing, prior elution digestion coimmunoprecipitated shotgun proteomics. Exogenous epitope FLAG HA advantage requiring antibody approach applied multiple tagged baits allow nonspecific overexpression false identifications levels itself Isotopic antibodies transfection alone negative controls. Initial decrease background focused dual scheme (416Gavin Bosche Krause Grandi Marzioch Bauer al.Functional organization proteome systematic analysis prot

Язык: Английский

Процитировано

61

Therapeutic reversal of Huntington’s disease by in vivo self-assembled siRNAs DOI Creative Commons
Li Zhang,

Tengteng Wu,

Yangyang Shan

и другие.

Brain, Год журнала: 2021, Номер 144(11), С. 3421 - 3435

Опубликована: Сен. 23, 2021

Abstract Huntington’s disease is an autosomal-dominant neurodegenerative caused by CAG expansion in exon 1 of the huntingtin (HTT) gene. Since mutant (mHTT) protein root cause disease, oligonucleotide-based therapeutic approaches using small interfering RNAs (siRNAs) and antisense oligonucleotides designed to specifically silence mHTT may be novel strategies for disease. Unfortunately, lack effective vivo delivery system remains a major obstacle realizing full potential oligonucleotide therapeutics, especially regarding cortex striatum, most severely affected brain regions In this study, we present synthetic biology strategy that integrates naturally existing exosome-circulating with artificial genetic circuits self-assembly mHTT-silencing siRNA striatum. We cytomegalovirus promoter-directed circuit encoding both neuron-targeting rabies virus glycoprotein tag siRNA. After being taken up mouse livers after intravenous injection, was able reprogramme hepatocytes transcribe self-assemble into glycoprotein-tagged exosomes. The further delivered through guided Consequently, three models treated circuit, levels toxic aggregates were successfully reduced therefore ameliorating behavioural deficits striatal cortical neuropathologies. Overall, our findings establish convenient, safe siRNAs provide significant benefit

Язык: Английский

Процитировано

59

TGF-β as a Key Modulator of Astrocyte Reactivity: Disease Relevance and Therapeutic Implications DOI Creative Commons
Jian Luo

Biomedicines, Год журнала: 2022, Номер 10(5), С. 1206 - 1206

Опубликована: Май 23, 2022

Astrocytes are essential for normal brain development and functioning. They respond to injury disease through a process referred as reactive astrogliosis, where the reactivity is highly heterogenous context-dependent. Reactive astrocytes active contributors pathology can exert beneficial, detrimental, or mixed effects following insults. Transforming growth factor-β (TGF-β) has been identified one of key factors regulating astrocyte reactivity. The genetic pharmacological manipulation TGF-β signaling pathway in animal models central nervous system (CNS) alters pathological functional outcomes. This review aims provide recent understanding regarding injury, aging, neurodegeneration. Further, it explores how modulates function context CNS injury.

Язык: Английский

Процитировано

59

Neuroinflammation in Huntington’s Disease: A Starring Role for Astrocyte and Microglia DOI
Julieta Saba, Federico López Couselo,

Julieta Bruno

и другие.

Current Neuropharmacology, Год журнала: 2021, Номер 20(6), С. 1116 - 1143

Опубликована: Дек. 2, 2021

Huntington's disease (HD) is a neurodegenerative genetic disorder caused by CAG repeat expansion in the huntingtin gene. HD causes motor, cognitive, and behavioral dysfunction. Since no existing treatment affects course of this disease, new treatments are needed. Inflammation frequently observed patients before symptom onset. Neuroinflammation, characterized presence reactive microglia, astrocytes inflammatory factors within brain, also detected early. However, comparison to other diseases, role neuroinflammation much less known. Work has been dedicated altered microglial astrocytic functions context HD, but attention given glial participation neuroinflammation. This review describes evidence inflammation animal models. It discusses recent knowledge on highlighting astrocyte microglia involvement considering anti-inflammatory therapeutic approaches.

Язык: Английский

Процитировано

58

FAN1 controls mismatch repair complex assembly via MLH1 retention to stabilize CAG repeat expansion in Huntington’s disease DOI Creative Commons

Robert Goold,

Joseph Hamilton, Thomas Menneteau

и другие.

Cell Reports, Год журнала: 2021, Номер 36(9), С. 109649 - 109649

Опубликована: Авг. 1, 2021

CAG repeat expansion in the HTT gene drives Huntington's disease (HD) pathogenesis and is modulated by DNA damage repair pathways. In this context, interaction between FAN1, a DNA-structure-specific nuclease, MLH1, member of mismatch pathway (MMR), not defined. Here, we identify highly conserved SPYF motif at N terminus FAN1 that binds to MLH1. Our data support model where has two distinct functions stabilize repeats. On one hand, it MLH1 restrict its recruitment MSH3, thus inhibiting assembly functional MMR complex would otherwise promote expansion. other promotes accurate via nuclease activity. These highlight potential avenue for HD therapeutics attenuating somatic

Язык: Английский

Процитировано

55