Primate-specific transposable elements shape transcriptional networks during human development DOI Creative Commons
Julien Pontis, Cyril Pulver, Christopher J. Playfoot

и другие.

Nature Communications, Год журнала: 2022, Номер 13(1)

Опубликована: Ноя. 23, 2022

Abstract The human genome contains more than 4.5 million inserts derived from transposable elements (TEs), the result of recurrent waves invasion and internal propagation throughout evolution. For new TE copies to be inherited, they must become integrated in germline or pre-implantation embryo, which requires that their source expressed at these stages. Accordingly, many TEs harbor DNA binding sites for pluripotency factors OCT4, NANOG, SOX2, KLFs are transiently during embryonic activation. Here, we describe how primate-restricted have additional lineage-specific transcription driving expression gastrulation later steps fetal development. These integrants serve as enhancers fostering transcription, amongst other targets, KRAB-zinc finger proteins (KZFPs) comparable evolutionary age, turn corral activity TE-embedded regulatory sequences a similarly lineage-restricted fashion. Thus, KZFP controllers play broad roles shaping transcriptional networks early

Язык: Английский

Human blastoids model blastocyst development and implantation DOI Creative Commons
Harunobu Kagawa, Alok Javali, Heidar Heidari Khoei

и другие.

Nature, Год журнала: 2021, Номер 601(7894), С. 600 - 605

Опубликована: Дек. 2, 2021

Abstract One week after fertilization, human embryos implant into the uterus. This event requires embryo to form a blastocyst consisting of sphere encircling cavity lodging proper. Stem cells can model that we called blastoid 1 . Here show naive pluripotent stem cultured in PXGL medium 2 and triply inhibited for Hippo, TGF-β ERK pathways efficiently (with more than 70% efficiency) blastoids generating blastocyst-stage analogues three founding lineages (more 97% trophectoderm, epiblast primitive endoderm) according sequence timing development. Blastoids spontaneously first axis, observe induces local maturation polar thereby endowing with capacity directionally attach hormonally stimulated endometrial cells, as during implantation. Thus, propose such is faithful, scalable ethical investigating implantation development 3,4

Язык: Английский

Процитировано

320

Spatial components of molecular tissue biology DOI
Giovanni Palla, David S. Fischer, Aviv Regev

и другие.

Nature Biotechnology, Год журнала: 2022, Номер 40(3), С. 308 - 318

Опубликована: Фев. 7, 2022

Язык: Английский

Процитировано

234

Pluripotent stem cell-derived model of the post-implantation human embryo DOI Creative Commons
Bailey A. T. Weatherbee, Carlos W. Gantner, Lisa K. Iwamoto-Stohl

и другие.

Nature, Год журнала: 2023, Номер 622(7983), С. 584 - 593

Опубликована: Июнь 27, 2023

Abstract The human embryo undergoes morphogenetic transformations following implantation into the uterus, but our knowledge of this crucial stage is limited by inability to observe in vivo. Models derived from stem cells are important tools for interrogating developmental events and tissue–tissue crosstalk during these stages 1 . Here we establish a model post-implantation embryo, embryoid, comprising embryonic extraembryonic tissues. We combine two types extraembryonic-like cell generated overexpression transcription factors with wild-type promote their self-organization structures that mimic several aspects embryo. These self-organized aggregates contain pluripotent epiblast-like domain surrounded Our functional studies demonstrate robustly differentiates amnion, mesenchyme primordial germ cell-like response bone protein cues. In addition, identify an inhibitory role SOX17 specification anterior hypoblast-like 2 Modulation subpopulations compartment demonstrates influence differentiation, highlighting crosstalk. conclusion, present modular, tractable, integrated 3 will enable us probe key questions development, critical window which substantial numbers pregnancies fail.

Язык: Английский

Процитировано

127

Early human embryonic development: Blastocyst formation to gastrulation DOI Creative Commons
Janet Rossant, Patrick Tam

Developmental Cell, Год журнала: 2022, Номер 57(2), С. 152 - 165

Опубликована: Янв. 1, 2022

Язык: Английский

Процитировано

126

Complete human day 14 post-implantation embryo models from naive ES cells DOI Creative Commons
Bernardo Oldak,

Emilie Wildschutz,

Vladyslav Bondarenko

и другие.

Nature, Год журнала: 2023, Номер unknown

Опубликована: Сен. 6, 2023

The ability to study human post-implantation development remains limited owing ethical and technical challenges associated with intrauterine after implantation1. Embryo-like models spatially organized morphogenesis structure of all defining embryonic extra-embryonic tissues the conceptus (that is, disc, bilaminar yolk sac, chorionic sac surrounding trophoblast layer) remain lacking1,2. Mouse naive stem cells have recently been shown give rise capable self-assembling into post-gastrulation structured stem-cell-based embryo (called SEMs)3. Here we extend those findings humans using only genetically unmodified (cultured in enhanced cell medium conditions)4. Such fully integrated complete SEMs recapitulate organization nearly known lineages compartments embryos, including epiblast, hypoblast, mesoderm layer latter compartments. These demonstrated developmental growth dynamics that resemble key hallmarks stage embryogenesis up 13-14 days fertilization (Carnegie 6a). include disc formation, epiblast lumenogenesis, polarized amniogenesis, anterior-posterior symmetry breaking, primordial germ-cell specification, visceral parietal endoderm expansion defines a cavity connecting stalk, trophoblast-surrounding compartment demonstrating syncytium lacunae formation. This SEM platform will probably enable experimental investigation previously inaccessible windows early post implantation peri-gastrulation development.

Язык: Английский

Процитировано

101

Spatial profiling of early primate gastrulation in utero DOI
Sophie Bergmann, Christopher A. Penfold, Erin Slatery

и другие.

Nature, Год журнала: 2022, Номер 609(7925), С. 136 - 143

Опубликована: Июнь 16, 2022

Язык: Английский

Процитировано

96

Self-patterning of human stem cells into post-implantation lineages DOI Creative Commons

Monique Pedroza,

Seher Ipek Gassaloglu,

Nicolas Dias

и другие.

Nature, Год журнала: 2023, Номер 622(7983), С. 574 - 583

Опубликована: Июнь 27, 2023

Abstract Investigating human development is a substantial scientific challenge due to the technical and ethical limitations of working with embryonic samples. In face these difficulties, stem cells have provided an alternative experimentally model inaccessible stages in vitro 1–13 . Here we show that pluripotent can be triggered self-organize into three-dimensional structures recapitulate some key spatiotemporal events early post-implantation development. Our system reproducibly captures spontaneous differentiation co-development epiblast-like extra-embryonic hypoblast-like lineages, establishes signalling hubs secreted modulators undergoes symmetry breaking-like events. Single-cell transcriptomics confirms diverse cell states perigastrulating embryo 14,15 without establishing placental types, including signatures epiblast, amniotic ectoderm, primitive streak, mesoderm, endoderm, as well initial yolk sac induction. Collectively, our features spanning from Carnegie stage 16 4–7, offering reproducible, tractable scalable experimental platform understand basic cellular molecular mechanisms underlie development, new opportunities dissect congenital pathologies high throughput.

Язык: Английский

Процитировано

86

Amniogenesis occurs in two independent waves in primates DOI Creative Commons
Maria Rostovskaya, Simon Andrews, Wolf Reik

и другие.

Cell stem cell, Год журнала: 2022, Номер 29(5), С. 744 - 759.e6

Опубликована: Апрель 18, 2022

In primates, the amnion emerges through cavitation of epiblast during implantation, whereas in other species it does so later at gastrulation by folding ectoderm. How mechanisms amniogenesis diversified evolution remains unknown. Unexpectedly, single-cell analysis primate embryos uncovered two transcriptionally and temporally distinct waves. To study this, we employed naive-to-primed transition human pluripotent stem cells (hPSCs) to model peri-implantation development. Partially primed hPSCs transiently gained ability differentiate into cavitating epithelium that morphologically matched early amnion, fully produced resembling late instead, thus recapitulating independent differentiation The wave follows a trophectoderm-like pathway encompasses cavitation, resembles an ectoderm-like route gastrulation. discovery waves explains how could emerge via duplication pre-existing trophectoderm program.

Язык: Английский

Процитировано

75

A single-cell transcriptome atlas profiles early organogenesis in human embryos DOI
Yichi Xu, Tengjiao Zhang, Qin Zhou

и другие.

Nature Cell Biology, Год журнала: 2023, Номер 25(4), С. 604 - 615

Опубликована: Март 16, 2023

Язык: Английский

Процитировано

74

Modeling post-implantation stages of human development into early organogenesis with stem-cell-derived peri-gastruloids DOI Creative Commons
Lizhong Liu, Seiya Oura,

Zachary Markham

и другие.

Cell, Год журнала: 2023, Номер 186(18), С. 3776 - 3792.e16

Опубликована: Июль 20, 2023

Язык: Английский

Процитировано

62