Super‐Resolution Stimulated Raman Scattering Microscopy with Graphical User Interface–Supported A‐PoD DOI Creative Commons

Hongje Jang,

Yajuan Li, Shuang Wu

и другие.

Current Protocols, Год журнала: 2024, Номер 4(1)

Опубликована: Янв. 1, 2024

Abstract Raman microscopy is a vibrational imaging technology that can detect molecular chemical bond signals. Since this signal originated from almost every mode of molecules with different energy levels, it provides spatiotemporal distribution various in living organisms without the need for any labeling. The limitations low strength have been effectively addressed by incorporating stimulated emission process, leading to development scattering (SRS) microscopy. Furthermore, issue spatial resolution has resolved through application computational techniques, specifically image deconvolution. In article, we present comprehensive guide super‐resolution SRS using an Adam‐based pointillism deconvolution (A‐PoD) algorithm, complemented user‐friendly graphical user interface (GUI). We delve into crucial parameters and conditions necessary achieving super‐resolved images imaging. Additionally, provide step‐by‐step walkthrough preprocessing steps use GUI‐supported A‐PoD. This complete package offers platform microscopy, enhancing versatility applicability advanced technique reveal nanoscopic multimolecular nature. © 2024 Authors. Current Protocols published Wiley Periodicals LLC. Basic Protocol : Super‐resolution interface–supported A‐PoD Support Deuterium labeling on cells heavy water metabolic

Язык: Английский

Virtual formalin-fixed and paraffin-embedded staining of fresh brain tissue via stimulated Raman CycleGAN model DOI Creative Commons
Zhijie Liu, Lingchao Chen, Haixia Cheng

и другие.

Science Advances, Год журнала: 2024, Номер 10(13)

Опубликована: Март 27, 2024

Intraoperative histology is essential for surgical guidance and decision-making. However, frozen-sectioned hematoxylin eosin (H&E) staining suffers from degraded accuracy, whereas the gold-standard formalin-fixed paraffin-embedded (FFPE) H&E too lengthy intraoperative use. Stimulated Raman scattering (SRS) microscopy has shown rapid of brain tissue with lipid/protein contrast but challenging to yield images identical nucleic acid-/protein-based FFPE stains interpretable pathologists. Here, we report development a semi-supervised stimulated CycleGAN model convert fresh-tissue SRS using unpaired training data. Within 3 minutes, virtual (SRVH) results that matched perfectly true could be generated. A blind validation indicated board-certified neuropathologists are able differentiate histologic subtypes human glioma on SRVH hardly conventional images. may provide diagnosis superior frozen in both speed extendable other types solid tumors.

Язык: Английский

Процитировано

30

Label-free nanoscopy of cell metabolism by ultrasensitive reweighted visible stimulated Raman scattering DOI
Haonan Lin,

Scott Seitz,

Yuying Tan

и другие.

Nature Methods, Год журнала: 2025, Номер unknown

Опубликована: Янв. 16, 2025

Язык: Английский

Процитировано

3

Viewing life without labels under optical microscopes DOI Creative Commons
Biswajoy Ghosh, Krishna Agarwal

Communications Biology, Год журнала: 2023, Номер 6(1)

Опубликована: Май 25, 2023

Abstract Optical microscopes today have pushed the limits of speed, quality, and observable space in biological specimens revolutionizing how we view life today. Further, specific labeling samples for imaging has provided insight into functions. This enabled label-based microscopy to percolate integrate mainstream science research. However, use labelfree been mostly limited, resulting testing bio-application but not bio-integration. To enable bio-integration, such need be evaluated their timeliness answer questions uniquely establish a long-term growth prospect. The article presents key label-free optical discusses integrative potential research unperturbed analysis samples.

Язык: Английский

Процитировано

30

Rational Design and Engineering of Conducting Polymers for Chemical Enhancement in Raman Scattering DOI Open Access
Huanhuan Zhang, J. Dong,

Xuke Tang

и другие.

Advanced Optical Materials, Год журнала: 2025, Номер unknown

Опубликована: Янв. 30, 2025

Abstract Raman scattering is characterized by the inherently weak inelastic of photons, influenced molecular vibrations or rotations. Recent advances have shifted from traditional electromagnetic enhancement methods to chemically enhanced scattering, offering significant advantages. However, these advancements typically depended on indirect and empirical models. This article introduces a systematic method for rational design engineering chemical scattering. involves identifying promising enhancers optimizing their morphology composition elucidating photochemical properties mapping charge‐transfer pathways with target molecules using transient absorption spectroscopy (TAS), cyclic voltammetry (CV), density functional theory (DFT) calculations. Employing this method, work has developed series rationally designed made conducting polymers (CPs), such as poly(3,4‐ethylenedioxythiophene) (PEDOT), optimized morphological traits compositions. These significantly improve surface‐enhanced (SERS), achieving reproducible factor up 10 6 , boost lasing, remarkable 40‐fold increase in energy conversion efficiency.

Язык: Английский

Процитировано

2

Integrative spatial protein profiling with multi-omics DOI
Rong Fan

Nature Methods, Год журнала: 2024, Номер 21(12), С. 2223 - 2225

Опубликована: Дек. 1, 2024

Язык: Английский

Процитировано

7

Principle of Stimulated Raman Scattering Microscopy: Emerging at High Spatiotemporal Limits DOI
Xin Gao, Naixin Qian, Wei Min

и другие.

The Journal of Physical Chemistry C, Год журнала: 2025, Номер unknown

Опубликована: Март 13, 2025

Язык: Английский

Процитировано

1

Single-Frame Vignetting Correction for Post-Stitched-Tile Imaging Using VISTAmap DOI Creative Commons
Anthony A. Fung,

A. W. P. Fung,

Zhi Li

и другие.

Nanomaterials, Год журнала: 2025, Номер 15(7), С. 563 - 563

Опубликована: Апрель 7, 2025

Stimulated Raman Scattering (SRS) nanoscopy imaging offers unprecedented insights into tissue molecular architecture but often requires stitching multiple high-resolution tiles to capture large fields of view. This process is time-consuming and frequently introduces vignetting artifacts—grid-like intensity fluctuations that degrade image quality hinder downstream quantitative analyses processing such as super-resolution deconvolution. We present VIgnetted Stitched-Tile Adjustment using Morphological Adaptive Processing (VISTAmap), a simple tool corrects these shading artifacts directly on the final stitched image. VISTAmap automatically detects tile grid configuration by analyzing frequency variations then applies sequential morphological operations homogenize In contrast conventional approaches require increased overlap or pre-acquisition background sampling, pragmatic, post-processing solution without need for separate individual images. work addresses pressing concerns delivering robust, efficient strategy enhancing mosaic uniformity in modern nanoscopy, where smallest details make tremendous impacts.

Язык: Английский

Процитировано

1

Unlocking in vivo metabolic insights with vibrational microscopy DOI
Tao Chen,

Marzia Savini,

Meng C. Wang

и другие.

Nature Methods, Год журнала: 2025, Номер 22(5), С. 886 - 889

Опубликована: Май 1, 2025

Язык: Английский

Процитировано

1

Far-field super-resolution chemical microscopy DOI Creative Commons
Mingwei Tang, Yubing Han, Danchen Jia

и другие.

Light Science & Applications, Год журнала: 2023, Номер 12(1)

Опубликована: Июнь 5, 2023

Far-field chemical microscopy providing molecular electronic or vibrational fingerprint information opens a new window for the study of three-dimensional biological, material, and systems. Chemical provides nondestructive way identification without exterior labels. However, diffraction limit optics hindered it from discovering more details under resolution limit. Recent development super-resolution techniques gives enlightenment to open this door behind far-field microscopy. Here, we review recent advances that have pushed boundary in terms spatial resolution. We further highlight applications biomedical research, material characterization, environmental study, cultural heritage conservation, integrated chip inspection.

Язык: Английский

Процитировано

15

Bioorthogonal Stimulated Raman Scattering Imaging Uncovers Lipid Metabolic Dynamics in Drosophila Brain During Aging DOI
Yajuan Li,

Phyllis Chang,

Shriya Sankaran

и другие.

GEN Biotechnology, Год журнала: 2023, Номер 2(3), С. 247 - 261

Опубликована: Июнь 1, 2023

Studies have shown that brain lipid metabolism is associated with biological aging and influenced by dietary genetic manipulations; however, the underlying mechanisms are elusive. High-resolution imaging techniques propose a novel potent approach to understanding metabolic dynamics in situ. Applying deuterium water (D2O) probing stimulated Raman scattering (DO-SRS) microscopy, we revealed activity Drosophila decreased sex-dependent manner. Female flies showed an earlier occurrence of turnover decrease than males. Dietary restriction (DR) downregulation insulin/IGF-1 signaling (IIS) pathway, two scenarios for lifespan extension, led significant enhancements old flies. Combining SRS deuterated bioorthogonal probes (deuterated glucose acetate), discovered that, under DR treatment IIS shifted use acetate as major carbon source synthesis. For first time, our study directly visualizes quantifies spatiotemporal alterations at single organelle (lipid droplet) level. Our not only demonstrates new studying situ but also illuminates interconnection aging, dietary, manipulations on regulation.

Язык: Английский

Процитировано

15