Research Square (Research Square),
Год журнала:
2022,
Номер
unknown
Опубликована: Ноя. 11, 2022
Abstract
Objective
Given
the
high
incidence
rate
and
mortality
of
CRC,
we
constructed
a
high-performance
early
diagnosis
model
based
on
ferroptosis-related
genes
explored
possible
pathway
between
ferroptosis
intestinal
microbiota
metabolites.
Methods
To
explore
associated
with
gene
expression
data
GSE14297
was
extracted
from
GEO
database.
A
series
difference
analyses
correlation
were
carried
out.
Cytoscape
used
to
optimize
PPI
network,
MCODE
screen
hub
modules.
16S
rDNA
analyze
flora.
MetaboAnalyst
5.0
metabolites
genes.
Results
Compared
normal
tissues,
2959
differentially
expressed
in
CRC
samples,
including
2946
upregulated
13
downregulated
63
overlapping
obtained
by
crossing
Further
analysis
showed
that
15
obtained.
The
ROC
curve
AUC
value
NQO1
0.929,
other
14
1.
GO
enrichment
modules
significantly
correlated
functions
"response
oxidative
stress",
"plasma
membrane
region"
"antioxidant
activity".
KEGG
ferroptosis,
metabolic
pathways,
pathways
cancer
enriched.
Metabolite
group,
enriched
neuroactive
ligand-receptor
interaction,
ABC
transporters,
aminoacyl
tRNA
biosynthesis,
cocaine
addition,
central
carbon
metabolism
cancer,
information
processing,
phenylalanine
metabolism,
biosynthesis
amino
acids.
Analysis
metaboanalyst5.0
25
differential
Conclusion
Based
bioinformatics
analysis,
found
be
Ferroptosis-related
gut
microbes
may
jointly
participate
progression
CRC.
Biomedicines,
Год журнала:
2024,
Номер
12(7), С. 1496 - 1496
Опубликована: Июль 5, 2024
The
field
of
multi-omics
has
witnessed
unprecedented
growth,
converging
multiple
scientific
disciplines
and
technological
advances.
This
surge
is
evidenced
by
a
more
than
doubling
in
publications
within
just
two
years
(2022-2023)
since
its
first
referenced
mention
2002,
as
indexed
the
National
Library
Medicine.
emerging
demonstrated
capability
to
provide
comprehensive
insights
into
complex
biological
systems,
representing
transformative
force
health
diagnostics
therapeutic
strategies.
However,
several
challenges
are
evident
when
merging
varied
omics
data
sets
methodologies,
interpreting
vast
dimensions,
streamlining
longitudinal
sampling
analysis,
addressing
ethical
implications
managing
sensitive
information.
review
evaluates
these
while
spotlighting
pivotal
milestones:
development
targeted
methods,
use
artificial
intelligence
formulating
indices,
integration
sophisticated
Acta Neuropathologica,
Год журнала:
2023,
Номер
146(4), С. 565 - 583
Опубликована: Авг. 7, 2023
Deficiency
of
dietary
choline,
an
essential
nutrient,
is
observed
worldwide,
with
~
90%
Americans
being
deficient.
Previous
work
highlights
a
relationship
between
decreased
choline
intake
and
increased
risk
for
cognitive
decline
Alzheimer's
disease
(AD).
The
associations
blood
circulating
the
pathological
progression
in
both
mild
impairment
(MCI)
AD
remain
unknown.
Here,
we
examined
these
cohort
patients
MCI
presence
either
sparse
or
high
neuritic
plaque
density
Braak
stage
second
moderate
(moderate
to
frequent
plaques,
=
IV)
severe
(frequent
VI),
compared
age-matched
controls.
Metabolomic
analysis
was
performed
on
serum
from
cohort.
We
then
assessed
effects
deficiency
(Ch-)
3xTg-AD
mice
supplementation
(Ch+)
APP/PS1
mice,
two
rodent
models
AD.
levels
were
reduced
while
pro-inflammatory
cytokine
TNFα
elevated
pathology
cases.
Reduced
correlated
higher
stage.
In
patients,
found
reductions
its
derivative
acetylcholine
(ACh),
TNFα.
Choline
ACh
negatively
load,
stage,
TNFα,
but
positively
MMSE,
brain
weight.
Metabolites
L-Valine,
4-Hydroxyphenylpyruvic,
Methylmalonic,
Ferulic
acids
significantly
associated
circuiting
levels.
Ch-
diet
amyloid-β
tau
phosphorylation
cortical
tissue,
paralleling
human-AD
profile.
Conversely,
Ch+
reducing
brains
mice.
Collectively,
low
AD-neuropathological
progression,
illustrating
importance
adequate
offset
disease.
Nature Communications,
Год журнала:
2024,
Номер
15(1)
Опубликована: Май 28, 2024
Abstract
The
gut
microbiome
(GM)
modulates
body
weight/composition
and
gastrointestinal
functioning;
therefore,
approaches
targeting
resident
microbes
have
attracted
considerable
interest.
Intermittent
fasting
(IF)
protein
pacing
(P)
regimens
are
effective
in
facilitating
weight
loss
(WL)
enhancing
composition.
However,
the
interrelationships
between
IF-
P-induced
WL
GM
unknown.
current
randomized
controlled
study
describes
distinct
fecal
microbial
plasma
metabolomic
signatures
combined
IF-P
(
n
=
21)
versus
a
heart-healthy,
calorie-restricted
(CR,
20)
diet
matched
for
overall
energy
intake
free-living
human
participants
(women
27;
men
14)
with
overweight/obesity
8
weeks.
Gut
symptomatology
improves
abundance
of
Christensenellaceae
circulating
cytokines
amino
acid
metabolites
favoring
fat
oxidation
increase
(p
<
0.05),
whereas
associated
longevity-related
metabolic
pathway
CR
0.05).
Differences
indicate
factors
play
role
maintenance
This
novel
work
provides
insight
into
profile
following
an
or
highlights
important
differences
assembly
composition
responsiveness.
These
data
may
inform
future
GM-focused
precision
nutrition
recommendations
using
larger
sample
sizes
longer
duration.
Trial
registration,
March
6,
2020
(ClinicalTrials.gov
as
NCT04327141),
based
on
previous
intervention
trial.
Philosophical Transactions of the Royal Society B Biological Sciences,
Год журнала:
2023,
Номер
378(1888)
Опубликована: Сен. 4, 2023
Food
insecurity
(FI)
is
associated
with
obesity
among
women
in
high-income
countries.
This
seemingly
paradoxical
association
can
be
explained
by
the
insurance
hypothesis,
which
states
that
humans
possess
evolved
mechanisms
increase
fat
storage
to
buffer
against
energy
shortfall
when
access
food
unpredictable.
The
evolutionary
logic
underlying
hypothesis
well
established
and
experiments
on
animals
confirm
exposure
unpredictable
causes
weight
gain,
but
involved
are
less
clear.
Drawing
data
from
other
vertebrates,
we
review
a
suite
of
behavioural
physiological
could
under
FI.
FI
short-term
hyperphagia,
evidence
it
increased
total
intake
lacking.
Experiments
suggest
increases
retained
metabolizable
reductions
expenditure
sufficient
fuel
gain
absence
intake.
Reducing
diverting
somatic
maintenance
into
stores
should
improve
survival
FI,
trade-offs
potentially
include
disease
risk
accelerated
ageing.
We
conclude
plausibly
adiposity,
poor
health
shorter
lifespan.
article
part
discussion
meeting
issue
‘Causes
obesity:
theories,
conjectures
(Part
II)’.
Microbial Biotechnology,
Год журнала:
2025,
Номер
18(3)
Опубликована: Март 1, 2025
ABSTRACT
Advances
in
neuromicrobiology
and
related
omics
technologies
have
reinforced
the
idea
that
unseen
microbes
play
critical
roles
human
cognition
behaviour.
Included
this
research
is
evidence
indicating
gut
microbes,
through
direct
indirect
pathways,
can
influence
aggression,
anger,
irritability
antisocial
Moreover,
manufacture
chemicals
are
known
to
compromise
cognition.
For
example,
recent
court
decisions
United
States
Europe
acknowledge
produce
high
levels
of
ethanol,
without
consumption
alcohol
by
defendants.
The
dismissal
driving
while
intoxicated
charges
these
cases—so‐called
auto‐brewery
syndrome—highlights
way
which
microbiome
knowledge
will
enhance
precision,
objectivity
fairness
our
legal
systems.
Here
opinion
essay,
we
introduce
concept
‘legalome’—the
application
science
forensic
psychiatry
criminal
law.
We
argue
rapid
pace
microbial
discoveries,
including
those
challenge
ideas
free
moral
responsibility,
necessitate
a
reconsideration
traditional
doctrines
justifications
retributive
punishment.
implications
extend
beyond
courtroom,
challenging
us
reconsider
how
environmental
factors—from
diet
socioeconomic
conditions—might
shape
preventative
rehabilitative
efforts
their
effects
on
microbiome.
Frontiers in Nutrition,
Год журнала:
2022,
Номер
9
Опубликована: Окт. 26, 2022
Nutritional
interventions
are
a
promising
therapeutic
option
for
addressing
obesity
and
cardiometabolic
dysfunction.
One
such
option,
intermittent
fasting
(IF),
has
emerged
as
viable
alternative
to
daily
caloric
restriction
may
beneficially
modulate
body
weight
regulation
alter
the
gut
microbiome
(GM)
plasma
metabolome.
This
secondary
analysis
of
larger,
registered
trial
(ClinicalTrials.gov
ID:
NCT04327141)
examined
effect
four-week
intervention
comparing
one
vs.
two-consecutive
days
IF
in
combination
with
protein
pacing
(IF-P;
4-5
meals/day,
>30%
protein/day)
on
GM,
metabolome,
associated
clinical
outcomes
overweight
obese
adults.
Participants
(n
=
20)
were
randomly
assigned
either
diet
consisting
day
(total
36
h)
six
low-calorie
P
per
week
(IF1-P,
n
10)
or
two
(60
h
total)
five
(IF2-P,
10).
The
fecal
microbiome,
outcomes,
metabolome
analyzed
at
baseline
(week
0)
after
four
weeks.
There
no
significant
time
interaction
effects
alpha
diversity;
however,
diversity
was
negatively
correlated
percent
fat
change
(p
0.030).
In
addition,
beta-diversity
both
groups
altered
significantly
by
0.001),
differences
between
groups.
IF1-P
group
had
increase
abundance
Ruminococcaceae
Incertae
Sedis
Eubacterium
fissicatena
(q
≤
0.007),
while
IF2-P
decrease
ventriosum
0.005).
metabolite
profile
participants
displayed
increases
serine,
trimethylamine
oxide
(TMAO),
levulinic
acid,
3-aminobutyric
citrate,
isocitrate,
glucuronic
acid
0.049)
compared
IF1-P.
Fecal
short-chain
fatty
concentrations
did
not
differ
≥
0.126).
Interestingly,
gastrointestinal
symptoms
reduced
but
group.
Our
results
demonstrate
that
short-term
modestly
influenced
GM
community
structure
suggesting
these
protocols
could
be
certain
nutritional
strategies.
Significant
human
gut
microbiome
changes
during
adolescence
suggest
that
microbial
community
evolution
occurs
throughout
important
developmental
periods
including
the
transition
to
college,
a
typical
life
phase
of
weight
gain.
In
this
observational
longitudinal
study
139
college
freshmen
living
in
on-campus
dormitories,
we
tracked
via
16S
amplicon
sequencing
and
body
across
single
academic
year.
Participants
were
grouped
by
change
categories
gain
(WG),
loss
(WL),
maintenance
(WM).
Upon
assessment
structure,
unweighted
weighted
UniFrac
metrics
revealed
significant
shifts
with
substantial
variation
explained
individual
effects
within
categories.
Genera
positively
contributed
these
associations
included
Bacteroides,
Blautia,
Bifidobacterium
WG
participants
Prevotella
Faecalibacterium
WL
WM
participants.
Moreover,
Prevotella/Bacteroides
ratio
was
significantly
different
category,
displaying
an
increased
ratio.
Importantly,
genera
did
not
display
co-dominance
nor
ease
between
Prevotella-
Bacteroides-dominated
states.
We
further
assessed
overall
taxonomic
variation,
noting
stability
compared
microbiome.
Finally,
found
30
latent
structures
waist
circumference,
sleep,
dietary
factors,
alcohol
consumption
chief
among
them.
Our
findings
highlight
high
level
importance
initial
structure
students
period
major
lifestyle
changes.
Further
work
is
needed
confirm
explore
mechanistic
relationships
microbes
free-living
individuals.The
freshman
year
transitional
may
provide
insights
into
relationship
regulation
due
increase
vulnerability
change.
During
critical
many
factors
influence
formalize
have
bearing
on
health
outcomes
individual’s
life.
college-aged
population,
variability
trajectory.
underpinned
such
as
Bifidobacterium,
Prevotella,
displayed
varying
degrees
inter-individual
and,
some
instances,
resistance
alternative
Accounting
for
considerations
context
control
adolescents
prove
useful
improving
target
intervention
setting.
Advances in Nutrition,
Год журнала:
2023,
Номер
15(1), С. 100131 - 100131
Опубликована: Окт. 21, 2023
In
the
United
States,
college
students
experience
disproportionate
food
insecurity
(FI)
rates
compared
to
national
prevalence.
The
of
acute
and
chronic
FI
has
been
associated
with
negative
physical
mental
health
outcomes
in
this
population.
This
narrative
review
aims
summarize
current
methodologies
for
assessing
States.
To
date,
predominately
consisted
subjective
assessments,
such
as
self-reported
measures
dietary
intake,
perceived
status,
stress,
depression,
anxiety,
sleep
behaviors.
review,
along
emergence
an
international
public
concern,
establishes
need
novel,
innovative,
objective
biomarkers
evaluate
short-
long-term
impacts
on
students.
inclusion
will
further
elucidate
relationship
between
a
multitude
better
inform
strategies
reducing
pervasiveness
States
student