Journal of Experimental Botany,
Год журнала:
2018,
Номер
70(4), С. 1087 - 1094
Опубликована: Дек. 18, 2018
Plants
nourish
rhizospheric
microbes
via
provision
of
carbon
substrates,
and
the
composition
microbiome
is
strongly
influenced
by
metabolic
phenomena
such
as
niche
differentiation,
competitive
exclusion,
cross-feeding.
Despite
intensive
investigations
taxonomic
structure
in
root
microbiomes,
there
relatively
little
biochemical
knowledge
niches
occupied
microbial
strains
rhizosphere.
Here,
we
review
new
tools
approaches
that
are
boosting
our
mechanisms
shape
microbiome.
New
studies
have
elucidated
pathways
mediate
colonisation
pathogen
suppression,
synthetic
communities
emerging
a
powerful
tool
to
understand
microbe–microbe
interactions.
Knowledge
exudate
being
advanced
metabolomics
methodologies,
which
highlighted
specific
components
can
inhibit
growth,
certain
metabolites
recruit
mutualistic
according
substrate
uptake
preferences.
Microbial
genomics
rapidly
advancing,
with
large
collections
isolated
rhizosphere
mutant
libraries
giving
insights
into
colonisation.
Exometabolomics
methodology
for
directly
observing
metabolites,
also
profiling
Integrative
using
these
resources
should
enable
rapid
advances,
particularly
when
applied
standardised
experimental
set-ups
model
communities.
Frontiers in Sustainable Food Systems,
Год журнала:
2020,
Номер
4
Опубликована: Июль 10, 2020
Plant
growth
often
occurs
under
a
range
of
stressful
conditions,
including
soil
acidity
and
alkalinity.
Hydrogen
ion
concentration,
which
determines
pH
the
soil,
regulates
entire
chemistry
plant
nutrient
colloidal
solutions.
Beyond
certain
levels
multiple
stresses
such
as
hydrogen
toxicity,
imbalance,
toxicities
deficiencies
are
induced
in
plants.
Breeding
for
stress
coupled
with
suitable
agronomic
practices
has
been
way
to
deal
this
situation
agriculture.
However,
promoting
microbes
(PGPM)
have
shown
potential
sustainable
enhancers
help
environmental
stresses.
Considering
long-term
evolutionary
relationships
between
plants
microbes,
it
is
probable
that
much
remains
unknown
about
benefits
could
be
harnessed
from
PGPM.
This
article
reviews
current
understanding
alkalinity
effects
on
various
approaches
or
address
these
review
further
provides
detailed
account
regarding
role
PGPM
management,
when
breeding
combined.
Approaches
already
evaluated
limitations
because
soils
gradual
progressive
conditions.
Greater
exploitation
regard,
would
interesting
explore
they
more
fashion.
Future
crop
production
will
require
tolerance,
but
also
implementation
microbial
technologies
provide
enhanced
tolerance
stress.
Frontiers in Sustainable Food Systems,
Год журнала:
2021,
Номер
5
Опубликована: Июль 6, 2021
Growing
environmental
concerns
are
potentially
narrowing
global
yield
capacity
of
agricultural
systems.
Climate
change
is
the
most
significant
problem
world
currently
facing.
To
meet
food
demand,
production
must
be
doubled
by
2050;
over
exploitation
arable
lands
using
unsustainable
techniques
might
resolve
demand
issues,
but
they
have
negative
effects.
Current
crop
systems
a
major
reason
for
changing
climate
through
diminishing
biodiversity,
physical
and
chemical
soil
degradation,
water
pollution.
The
application
fertilizers
pesticides
contribute
to
greenhouse
gas
emissions
(GHG)
toxic
depositions.
At
this
crucial
time,
there
pressing
need
transition
more
sustainable
practices,
ones
that
concentrate
on
promoting
mechanisms,
which
enable
crops
grow
well
in
resource
limited
environmentally
challenging
environments,
also
develop
with
greater
use
efficiency
optimum
yields
across
wider
array
conditions.
phytomicrobiome
considered
as
one
best
strategies;
better
alternative
agriculture,
viable
solution
twin
challenges
security
stability.
Use
phytomicrobiome,
due
its
friendly
mechanisms
plant
growth
promotion,
becoming
widespread
industry.
Therefore,
review,
we
emphasize
contribution
beneficial
members,
particularly
rhizobacteria
(PGPR),
strategy
improvement
face
change.
Also,
roles
dwelling
microbes
stress
amelioration,
nutrient
supply
(nitrogen
fixation,
phosphorus
solubilization),
phytohormone
along
factors
could
affect
their
been
discussed
extensively.
Lastly,
limitations
expansion
biobased
techniques,
instance,
perspective
producers,
indigenous
microbial
competition
regulatory
approval
discussed.
This
review
largely
focusses
importance
approaches
such
biobased/PGPR-based
our
systems,
especially
context
current
conditions,
almost
certain
worsen
near
future.
Frontiers in Sustainable Food Systems,
Год журнала:
2021,
Номер
5
Опубликована: Июнь 30, 2021
A
multitude
of
roles
is
played
by
microbes
in
food
and
agriculture
that
include
nutrient
cycling
management,
organic
matter
decomposition
fermentation.
Plant
growth
promoting
rhizobacteria
(PGPR),
representing
microbial
groups
with
ability
colonizing
plant
roots,
influence
through
various
indirect
direct
modes
order
to
promote
its
and/or
protect
it
from
diseases
or
damage
due
insect
attack.
Thus,
PGPR
research
has
received
renewed
interest
worldwide.
Increasing
number
crop-specific
are
being
commercialized
these
days.
Approaches
like
seed-inoculation
soil
application
either
alone
combination
bacterial
culture/product
for
increased
availability
phosphate
solubilisation,
potassium
sulfur
oxidation,
nitrogen
fixation,
iron,
copper
chelation
gaining
popularity.
Arbuscular
mycorrhizal
fungi
(AMF)
root
fungal
symbiont
improve
management
abiotic
stress
such
as
phosphorus
deficiency.
involves
production
indole
acetic
acid
(IAA),
ammonia
(NH
3
),
hydrogen
cyanide
(HCN),
catalase,
etc.
also
uptake
altering
the
level
hormone
enhances
surface
area
increasing
girth
shape,
thereby
helping
absorbing
more
nutrients.
facilitate
seed
germination,
seedling
crop
yield.
An
array
including
Pseudomonas,
Azospirillum,
Azotobacter,
Klebsiella,
Enterobacter,
Alcaligenes,
Arthrobacter,
Burkholderia,
Bacillus
,
Serratia
enhance
growth.
Various
Pseudomonas
sp.
have
demonstrated
significant
increase
yield
different
agricultural
crops,
wheat.
Hence,
developing
a
successful
formulation,
candidate
should
possess
characteristics
high
rhizosphere
competence,
extensive
competitive
saprophytic
ability,
enhancing
ease
mass
production,
broad-spectrum
action,
safety
toward
environment
compatibility
other
partnering
organisms.
Abstract
Background
Stress-induced
hormones
are
essential
for
plants
to
modulate
their
microbiota
and
dynamically
adjust
the
environment.
Despite
emphasis
of
role
phytohormone
ethylene
in
plant
physiological
response
heterospecific
neighbour
detection,
less
is
known
about
how
this
activated
signal
mediates
focal
rhizosphere
enhance
fitness.
Here,
using
3
years
peanut
(
Arachis
hypogaea
L.),
a
legume,
cyanide-containing
cassava
Manihot
esculenta
Crantz)
intercropping
monocropping
field,
pot
hydroponic
experiments
addition
exogenous
application
soil
incubation
experiments,
we
found
that
ethylene,
cyanide-derived
signal,
associated
with
chemical
identification
neighbouring
microbial
re-assemblage
rhizosphere.
Results
Ethylene
production
roots
can
be
triggered
by
cyanide
plants.
This
gaseous
alters
composition
re-assembles
co-occurrence
network
shifting
abundance
an
actinobacterial
species,
Catenulispora
sp.,
which
becomes
keystone
intercropped
The
re-assembled
provide
more
available
nutrients
support
seed
production.
Conclusions
Our
findings
suggest
root
acts
as
dual
role.
It
plays
perceiving
biochemical
cues
from
interspecific
neighbours,
also
has
regulatory
function
mediating
assembly,
thereby
enhancing
fitness
improving
discovery
provides
promising
direction
develop
novel
strategies
targeted
manipulations
microbiome
through
signals.
Journal of Fungi,
Год журнала:
2021,
Номер
7(9), С. 719 - 719
Опубликована: Сен. 1, 2021
Endophytic
fungi
infect
plant
tissues
by
evading
the
immune
response,
potentially
stimulating
stress-tolerant
growth.
The
selectively
allows
microbial
colonization
to
carve
endophyte
structures
through
phenotypic
genes
and
metabolic
signals.
Correspondingly,
develop
various
adaptations
symbiotic
signal
transduction
thrive
in
mycorrhiza.
Over
past
decade,
regulatory
mechanism
of
plant-endophyte
interaction
has
been
uncovered.
Currently,
great
progress
made
on
endosphere,
especially
endophytic
fungi.
Here,
we
systematically
summarize
current
understanding
colonization,
molecular
recognition
pathways,
evasion
mechanisms
clarify
transboundary
communication
that
homeostatic
phytobiome.
In
this
work,
focus
signaling
mechanisms,
summarizing
research
converge
improve
our