Cited by A special issue of <i>Essays in Biochemistry</i> on evolutionary developmental biology

Sox21b underlies the rapid diversification of a novel male genital structure between Drosophila species DOI

Amber M. Ridgway, Emily Jean Hood,

Javier Figueras Jimenez

и другие.

Current Biology, Год журнала: 2024, Номер 34(5), С. 1114 - 1121.e7

Опубликована: Фев. 2, 2024

The emergence and diversification of morphological novelties is a major feature animal evolution.1York J.R. McCauley D.W. origin evolution vertebrate neural crest cells.Open Biol. 2020; 10190285Crossref PubMed Scopus (32) Google Scholar,2Tomoyasu Y. What crustaceans can tell us about the insect wings other morphologically novel structures.Curr. Opin. Genet. Dev. 2021; 69: 48-55Crossref (7) Scholar,3Moczek A.P. On origins novelty diversity in development evolution: case study on beetle horns.Cold Spring Harbor Symp. Quant. 2009; 74: 289-296Crossref (0) Scholar,4Kijimoto T. Pespeni M. Beckers O. Moczek Beetle horns horned beetles: emerging models developmental ecology.Wiley Interdiscip. Rev. 2013; 2: 405-418Crossref (33) Scholar,5Rebeiz Tsiantis Enhancer novelty.Curr. 2017; 45: 115-123Crossref (63) Scholar,6Shubin N. Tabin C. Carroll S. Deep homology evolutionary novelty.Nature. 457: 818-823Crossref (585) Scholar,7Bruce H.S. Patel N.H. Daphnia carapace structures evolved via cryptic persistence serial homologs.Curr. 2022; 32: 3792-3799.e3Abstract Full Text PDF Scholar,8Colizzi E.S. Hogeweg P. Vroomans R.M.A. Modelling novelty: review.Essays Biochem. 66: 727-735Crossref (2) Scholar,9Muller G.B. Wagner G.P. Novelty Evolution: Restructuring Concept.Annu. Ecol. Syst. 1991; 22: 229-256Crossref Scholar However, relatively little known genetic basis mechanisms underlying their diversification. epandrial posterior lobes male genitalia are particular Drosophila species.10Glassford W.J. Johnson W.C. Dall N.R. Smith S.J. Liu Boll W. Noll Rebeiz Co-option an Ancestral Hox-Regulated Network Underlies Recently Evolved Morphological Novelty.Dev. Cell. 2015; 34: 520-531Abstract (75) Scholar,11Jagadeeshan Singh R.S. A time-sequence functional analysis mating behavior genital coupling Drosophila: role female choice sex-drive genitalia.J. Evol. 2006; 19: 1058-1070Crossref Scholar,12Yassin A. Orgogozo V. Coevolution between Male Female Genitalia melanogaster Species Subgroup.PLoS One. 8e57158Crossref (72) Scholar,13Kopp True Evolution sexual characters Oriental species group.Evol. 2002; 4: 278-291Crossref (111) grasp ovipositor insert her abdominal tergites and, therefore, important for copulation recognition.10Glassford Scholar,14Frazee S.R. Harper A.R. Afkhami Wood M.L. McCrory J.C. Masly J.P. Interspecific introgression reveals morphology during reproductive isolation Drosophila.Evolution. 75: 989-1002Crossref (3) Scholar,15Frazee Multiple selection pressures drive rapid complex secondary structure.Ecol. 5: 4437-4450Crossref (29) Scholar,16LeVasseur-Viens H. Polak Moehring A.J. No evidence external affecting 1797-1807Crossref (20) Scholar,17Robertson H.M. Mating asymmetries phylogeny complex.Pac. Sci. 1988; 42: 72-80Google likely from co-option Hox-regulated gene network spiracles10Glassford have since diversified D. simulans clade, particular, over last 240,000 years, driven by selection.18McDermott Kliman R.M. Estimation Isolation Times Island Complex Multilocus DNA Sequence Data.PLOS 2008; 3e2442Crossref (47) Scholar,19Coyne J.A. Genetic Basis Differences Genital Morphology Among Three Sibling Drosophila.Evolution (NY). 1983; 37: 1101-1118Crossref Scholar,20House C.M. Lewis Z. Hodgson D.J. Wedell Sharma M.D. Hunt J. Hosken Sexual Natural Selection Both Influence Evolution.PLoS 8e63807Crossref (43) Scholar,21House simulans.Evolution. 501-514Crossref (1) this polygenic but, to best our knowledge, none causative genes been identified.22Liu Mercer J.M. Stam L.F. Gibson G.C. Zeng Z.-B. Laurie C.C. Analysis Shape Difference mauritiana.Genetics. 1996; 142: 1129-1145Crossref Scholar,23Zeng Z.B. Kao C.H. architecture shape difference two species.Genetics. 2000; 154: 299-310Crossref Scholar,24LeVasseur-Viens Individual Contributions Variation mauritiana.Int. 2014; 2014808247Crossref Scholar,25True Quantitative Divergence Secondary Traits Between mauritiana.Evolution. 1997; 51: 816-832Crossref Scholar,26Tanaka K.M. Hopfen Herbert M.R. Schlötterer Stern D.L. McGregor Nunes M.D.S. Architecture Functional Characterization Genes Underlying Rapid Diversification External 200: 357-369Crossref (26) Scholar,27Hagen J.F.D. Mendes Booth Figueras Jimenez Tanaka Franke F.A. Baudouin-Gonzalez L. Ridgway A.M. Arif et al.Unraveling Species.Mol. 38: 437-448Crossref Scholar,28Hackett J.L. Wang X. B.R. Macdonald Mapping QTL Contributing Posterior Lobe Strains melanogaster.PLoS 2016; 11e0162573Crossref Scholar,29Laurie An Introgression Trait Loci That Contribute 145: 339-348Crossref Scholar,30Masly Dalton J.E. Srivastava Chen Arbeitman M.N. Rapidly Evolving Drosophila.Genetics. 2011; 189: 357-374Crossref (35) Identifying these essential understanding impact recognition. Here, we show that Sox21b negatively regulates lobe size. This consistent with expanded expression mauritiana, which develops smaller than simulans. We tested generating reciprocal hemizygotes confirmed changes underlie species. Furthermore, found size differences caused species-specific allele significantly affect duration. Taken together, sexual-selection-driven structure its copulatory behavior.

Язык: Английский

Процитировано

A Unifying Hypothesis for the Genome Dynamics Proposed to Underly Neuropsychiatric Phenotypes DOI

George S. Gericke

Опубликована: Март 22, 2024

The sheer number of gene variants and the extent observed clinical molecular heterogeneity recorded in neuropsychiatric disorders (NPDs), could be due to magnified downstream effects initiated by a smaller group genomic higher order alterations response endogenous or environmental stress. Chromosomal common fragile sites (CFS) are functionally linked with microRNA’s, copy (CNVs), sub-microscopic deletions duplications DNA, rare single-nucleotide (SNVs/SNPs) small insertions/deletions (indels), as well chromosomal translocations, duplications, altered methylation, microRNA L1 transposon activity 3-D topology characteristics. These structural features have been various NPDs mostly isolated reports, usually only viewed areas harboring potential candidate genes interest. suggestion use level entry point, (the ‘fragilome’ associated features), activated central mechanism (‘stress’) for studying NPD genetics, has unify existing vast different observations this field. This approach may explain continuum findings distributed between affected unaffected individuals, clustering phenotypes overlapping comorbidities, extensive association certain other medical disorders.

Язык: Английский

Процитировано

Obligate endosymbiosis enables genome expansion during eukaryogenesis DOI

Samuel H. A. von der Dunk, Paulien Hogeweg, ‎Berend Snel

и другие.

Communications Biology, Год журнала: 2023, Номер 6(1)

Опубликована: Июль 25, 2023

The endosymbiosis of an alpha-proteobacterium that gave rise to mitochondria was one the key events in eukaryogenesis. One striking outcome eukaryogenesis a much more complex cell with large genome. Despite existence many alternative hypotheses for this and other patterns potentially related endosymbiosis, constructive evolutionary model which these can be studied is still lacking. Here, we present theoretical approach focus on consequences rather than causes mitochondrial endosymbiosis. Using cell-cycle regulation, find genome expansion size asymmetry arise from emergent host-symbiont coordination. We also holobionts host small symbiont genomes perform best long timescales mimic By designing studying obligate uncovered some forces may drive observed nature. Our results provide foundation such as asymmetry, reveal outcomes have not been considered so far, coordination without direct communication.

Язык: Английский

Процитировано

A Unifying Hypothesis for the Genome Dynamics Proposed to Underlie Neuropsychiatric Phenotypes DOI

George S. Gericke

Genes, Год журнала: 2024, Номер 15(4), С. 471 - 471

Опубликована: Апрель 8, 2024

The sheer number of gene variants and the extent observed clinical molecular heterogeneity recorded in neuropsychiatric disorders (NPDs) could be due to magnified downstream effects initiated by a smaller group genomic higher-order alterations response endogenous or environmental stress. Chromosomal common fragile sites (CFS) are functionally linked with microRNAs, copy (CNVs), sub-microscopic deletions duplications DNA, rare single-nucleotide (SNVs/SNPs), small insertions/deletions (indels), as well chromosomal translocations, duplications, altered methylation, microRNA L1 transposon activity, 3-D topology characteristics. These structural features have been various NPDs mostly isolated reports usually only viewed areas harboring potential candidate genes interest. suggestion use higher level entry point (the ‘fragilome’ associated features) activated central mechanism (‘stress’) for studying NPD genetics has unify existing vast different observations this field. This approach may explain continuum findings distributed between affected unaffected individuals, clustering phenotypes overlapping comorbidities, extensive heterogeneity, association certain other medical disorders.

Язык: Английский

Процитировано

The evolution of multicellularity and cell differentiation symposium: bridging evolutionary cell biology and computational modelling using emerging model systems DOI

Núria Ros-Rocher

Biology Open, Год журнала: 2024, Номер 13(10)

Опубликована: Июль 15, 2024

'The evolution of multicellularity and cell differentiation' symposium, organized as part the EuroEvoDevo 2024 meeting on June 25-28th in Helsinki (Finland), addressed recent advances molecular mechanistic basis for differentiation eukaryotes. The symposium involved over 100 participants brought together 10 speakers at diverse career stages. Talks covered various topics interface developmental biology, evolutionary comparative genomics, computational ecology using animal, protist, algal mathematical models. This offered a unique opportunity interdisciplinary dialog among researchers working different systems, especially promoting collaborations aligning strategies studying emerging model species. Moreover, it fostered opportunities to promote early field opened discussions ongoing work unpublished results. In this Meeting Review, we aim research, capture spirit meeting, present key discussed within dynamic, growing open community.

Язык: Английский

Процитировано

Sox21bunderlies the rapid diversification of a novel male genital structure betweenDrosophilaspecies DOI

Amber M. Ridgway,

E Hood,

Javier Figueras Jimenez

и другие.

bioRxiv (Cold Spring Harbor Laboratory), Год журнала: 2023, Номер unknown

Опубликована: Авг. 18, 2023

Summary The emergence and subsequent diversification of morphological novelties is a major feature animal evolution 1–9 . However, in most cases little known about the molecular basis novel structures genetic mechanisms underlying their diversification. epandrial posterior lobes male genital arch novelty some species Drosophila melanogaster subgroup 10–13 grasp ovipositor female then integrate between her abdominal tergites, therefore these are important for copulation species-recognition 10–12,14–17 evolved from co-option Hox regulated gene network spiracles 10 have since diversified shape size D. simulans clade particular over last 240,000 years driven by sexual selection 18–21 this highly polygenic but to best our knowledge none causative genes yet been identified despite extensive mapping 22–30 Identifying secondary essential understanding changes morphology evolutionary impact on recognition. Here, we show that transcription factor encoded Sox21b negatively regulates lobe during development. This consistent with higher expanded expression mauritiana , which develops smaller compared We tested generating reciprocal hemizygotes confirmed underlie two species. Furthermore, found differences caused species-specific allele significantly affect duration copulation. Taken together, study reveals structure its functional copulatory behaviour. Highlights development lobes, recently subgroup, has subsequently rapidly shape. than more expansive developing genitalia. Using hemizygosity test, variation underlies Behavioural tests causes otherwise genetically identical backgrounds. contributed divergence behaviour

Язык: Английский

Процитировано

A special issue of Essays in Biochemistry on evolutionary developmental biology DOI

Alistair P. McGregor, Alexandra D. Buffry, Renske M. A. Vroomans

и другие.

Essays in Biochemistry, Год журнала: 2022, Номер 66(6), С. 703 - 705

Опубликована: Дек. 1, 2022

Evolutionary developmental biology (or evo devo) is a broad field that aims to understand how processes evolve and this underpins phenotypic change organismal diversification. This encompasses need theoretical concepts in evolutionary tissues, cells, genes, proteins regulatory elements function evolve. The articles special issue review key topics the of devo including advances theory methodology as well our latest knowledge about molecular, cellular functionality

Язык: Английский

Процитировано