Molecular Therapy — Oncolytics,
Год журнала:
2021,
Номер
20, С. 532 - 544
Опубликована: Фев. 21, 2021
Colorectal
cancer
(CRC)
is
one
of
the
most
common
malignant
tumors,
with
second-highest
mortality
all
36
cancers
worldwide.
The
roles
fatty
acid
metabolism
in
CRC
were
investigated
to
explore
potential
therapeutic
strategies.
data
files
downloaded
from
Cancer
Genome
Atlas
(TCGA)
and
Gene
Expression
Omnibus
(GEO)
databases.
Univariate
least
absolute
shrinkage
selection
operator
(LASSO)
Cox
regression
analyses
used
construct
a
prognostic
risk
score
model
metabolism-related
genes
for
predicting
prognosis
CRC.
Patients
high-risk
had
poorer
TCGA
cohort
than
those
low-risk
confirmed
GEO
cohort.
Further
analysis
using
"pRRophetic"
R
package
revealed
that
patients
more
sensitive
5-fluorouracil.
A
comprehensive
evaluation
association
between
tumor
microenvironment
(TME)
characteristics
showed
suitable
activating
type
I/II
interferon
(IFN)
response
inflammation-promoting
function.
Tumor
Immune
Dysfunction
Exclusion
(TIDE)
SubMap
algorithm
results
also
demonstrated
are
anti-CTLA4
immunotherapy.
Therefore,
pattern
promotes
our
comprehension
TME
infiltration
characteristics,
thus
guiding
effective
immunotherapy
regimens.
Theranostics,
Год журнала:
2021,
Номер
11(7), С. 3089 - 3108
Опубликована: Янв. 1, 2021
Rationale:
Siglec15
is
an
emerging
target
for
normalization
cancer
immunotherapy.
However,
pan-cancer
anti-Siglec15
treatment
not
yet
validated
and
the
potential
role
of
in
bladder
(BLCA)
remains
elusive.
Methods:
We
comprehensively
evaluated
expression
pattern
immunological
using
analysis
based
on
RNA
sequencing
data
obtained
from
The
Cancer
Genome
Atlas.
then
systematically
correlated
with
characteristics
BLCA
tumor
microenvironment
(TME),
including
immunomodulators,
immunity
cycles,
tumor-infiltrating
immune
cells
(TIICs),
checkpoints,
T
cell
inflamed
score.
also
analyzed
predicting
molecular
subtype
response
to
several
options
BLCA.
Our
results
were
public
cohorts
as
well
our
microarray
cohort,
Xiangya
cohort.
developed
risk
score
(IRS),
it,
tested
its
ability
predict
prognosis
Results:
found
that
was
specifically
overexpressed
TME
various
cancers.
hypothesize
designs
a
non-inflamed
evidence
negatively
TIICs,
Bladder
high
sensitive
immunotherapy,
but
exhibited
higher
incidence
hyperprogression.
High
levels
indicated
luminal
characterized
by
lower
infiltration,
immunotherapy
neoadjuvant
chemotherapy,
anti-angiogenic
therapy
targeted
therapies
such
blocking
Siglec15,
β-catenin,
PPAR-γ,
FGFR3
pathways.
Notably,
combination
may
be
more
effective
strategy
than
monotherapy.
IRS
can
accurately
Conclusions:
Anti-Siglec15
might
suitable
correlates
could
options.
Abstract
Background
Continual
expression
of
PD-L1
in
tumor
cells
is
critical
for
immune
escape
and
host
T
cell
exhaustion,
however,
knowledge
on
its
clinical
benefits
through
inhibition
limited
breast
cancer.
N
6
-methyladenosine
(m
A)
plays
a
crucial
role
multiple
biological
activities.
Our
study
aimed
to
investigate
the
regulatory
m
A
modification
surveillance
Methods
MeRIP-seq
epitranscriptomic
microarray
identified
that
downstream
target
METTL3.
MeRIP-qPCR,
absolute
quantification
assay,
RIP-qPCR
were
used
examine
molecular
mechanism
underlying
METTL3/m
A/IGF2BP3
signaling
axis
expression.
B-NDG
BALB/c
mice
construct
xenograft
models
verify
phenotypes
upon
METTL3
IGF2BP3
silencing.
In
addition,
cancer
tissue
was
analyze
correlation
between
or
Results
We
METTL3-mediated
cells.
knockdown
significantly
abolished
reduced
stabilization
mRNA.
Additionally,
mRNA
activation
A-IGF2BP3-dependent.
Moreover,
enhanced
anti-tumor
immunity
PD-L1-mediated
activation,
infiltration
both
vitro
vivo.
also
positively
correlated
with
tissues.
Conclusion
suggested
could
post-transcriptionally
upregulate
an
A-IGF2BP3-dependent
manner
further
promote
mRNA,
which
may
have
important
implications
new
efficient
therapeutic
strategies
immunotherapy.
Journal of Hematology & Oncology,
Год журнала:
2020,
Номер
13(1)
Опубликована: Июнь 29, 2020
Abstract
VISTA
(V-domain
immunoglobulin
suppressor
of
T
cell
activation)
is
a
well-established
immune
regulatory
receptor.
However,
pre-clinical
investigations
indicated
more
complicated
influences
on
cancer
immunity
than
previously
recognized.
Here,
we
review
the
current
knowledge
therapeutic
phenotypes
and
molecular
mechanisms
that
underlie
contradictory
roles
in
checking
anti-cancer
responses.
Furthermore,
highlight
potential
indeterminacy
VISTA-targeted
strategies
immunotherapy,
with
silico
analyses.
In
fact,
functions
like
homeostatic
regulator
actively
normalizes
Thus,
role
remains
to
be
fully
elucidated.
Objective
Methionine
metabolism
is
involved
in
a
myriad
of
cellular
functions,
including
methylation
reactions
and
redox
maintenance.
Nevertheless,
it
remains
unclear
whether
methionine
metabolism,
RNA
antitumour
immunity
are
molecularly
intertwined.
Design
The
effect
methionine-restricted
diet
(MRD)
feeding
was
assessed
murine
models.
mechanisms
YTH
domain-containing
family
protein
1
(YTHDF1)
tumour
immune
escape
were
determined
vitro
vivo.
synergistic
effects
MRD
or
YTHDF1
depletion
with
PD-1
blockade
also
investigated.
Results
We
found
that
dietary
restriction
reduced
growth
enhanced
by
increasing
the
number
cytotoxicity
tumour-infiltrating
CD8
+
T
cells
different
mouse
Mechanistically,
S-adenosylmethionine
derived
from
promoted
N
6
-methyladenosine
(m
A)
translation
checkpoints,
PD-L1
V-domain
Ig
suppressor
cell
activation
(VISTA),
cells.
Furthermore,
m
A-specific
binding
inhibited
restoring
infiltration
cells,
synergised
for
better
control.
Clinically,
expression
correlated
poor
prognosis
immunotherapy
outcomes
cancer
patients.
Conclusions
play
critical
role
anticancer
through
regulating
functions
Targeting
could
be
potential
new
strategy
immunotherapy.
Frontiers in Cell and Developmental Biology,
Год журнала:
2021,
Номер
9
Опубликована: Март 11, 2021
The
chemokine
ligand
C-X-C
motif
11
(CXCL11)
is
involved
in
the
progression
of
various
cancers,
but
its
biological
roles
colorectal
cancer
(CRC)
remain
confused.
Therefore,
prognostic
value
and
underlying
mechanism
CXCL11
CRC
were
preliminarily
evaluated.
Three
independent
datasets
used
for
mRNA-related
analysis:
one
dataset
from
Cancer
Genome
Atlas
(TCGA,
n
=
451)
two
single-cell
RNA
sequencing
(scRNA-seq)
Gene
Expression
Omnibus
(GEO):
GSE146771
GSE132465.
In
addition,
a
colon
adenocarcinoma
(COAD)
patient
cohort
(the
Yijishan
Hospital
cohort,
YJSHC,
108)
was
utilized
analysis
cell
infiltration
by
immunohistochemistry.
We
determined
distribution
tumor
tissue
across
all
TCGA
cancers
found
that
expression
significantly
upregulated
both
COAD
rectal
(READ).
However,
upregulation
mRNA
associated
with
better
prognosis
COAD,
not
READ.
Within
patients
high
abundance
intratumoral
+
cells
had
prolonged
survival
(
p
0.001).
Furthermore,
we
group
higher
proportion
antitumor
immune
cells,
lower
protumor
cells.
Additionally,
discovered
changes
gene
enriched
pathway
network
mediated
CXCL11.
Interestingly,
cytotoxic
genes
(IFNG,
GZMA,
GZMB,
GZMK,
GZMM,
PRF1)
immunosuppressive
molecules,
including
PD-L1,
positively
correlated
expression.
CXCL11,
which
promoted
immunity
to
benefit
survival,
identified
as
an
biomarker
COAD.
Cancer-associated
fibroblasts
(CAFs)
are
a
heterogeneous
cell
population
that
plays
crucial
role
in
remodeling
the
tumor
microenvironment
(TME).
Here,
through
integrated
analysis
of
spatial
and
single-cell
transcriptomics
data
across
six
common
cancer
types,
we
identified
four
distinct
functional
subgroups
CAFs
described
their
distribution
characteristics.
Additionally,
RNA
sequencing
(scRNA-seq)
from
three
additional
types
two
newly
generated
scRNA-seq
datasets
rare
namely
epithelial-myoepithelial
carcinoma
(EMC)
mucoepidermoid
(MEC),
expanded
our
understanding
CAF
heterogeneity.
Cell-cell
interaction
conducted
within
context
highlighted
pivotal
roles
matrix
(mCAFs)
angiogenesis
inflammatory
(iCAFs)
shaping
immunosuppressive
microenvironment.
In
patients
with
breast
(BRCA)
undergoing
anti-PD-1
immunotherapy,
iCAFs
demonstrated
heightened
capacity
facilitating
proliferation,
promoting
epithelial-mesenchymal
transition
(EMT),
contributing
to
establishment
an
Furthermore,
scoring
system
based
on
showed
significant
correlation
immune
therapy
response
melanoma
patients.
Lastly,
provided
web
interface
(
https://chenxisd.shinyapps.io/pancaf/
)
for
research
community
investigate
pan-cancer.
Journal of Oncology,
Год журнала:
2022,
Номер
2022, С. 1 - 17
Опубликована: Янв. 29, 2022
The
serine
protease
inhibitor
clade
E
member
1
(SERPINE1)
is
a
major
of
tissue
plasminogen
activator
and
urokinase,
has
been
implicated
in
the
development
progression
variety
tumors.
In
this
study,
mRNA
microarray
TCGA
database
were
used
to
comprehensively
analyze
upregulation
SERPINE1
gastric
cancer
(GC)
tissues
compared
with
normal
stomach
tissues.
Kaplan-Meier
results
confirmed
that
patients
high
expression
exhibited
worse
overall
survival
disease-free
survival.
addition,
cell
proliferation,
scratches,
transwell
migration
invasion
assay
showed
knockdown
inhibited
GC
ells.
Western
blot
VEGF
IL-6
was
significantly
upregulated
after
overexpression
SERPINE1.
Meanwhile,
positively
correlated
level
immune
infiltration
using
online
analysis
tools
TISIDB
TIMER.
And
increased
increase
malignancy
which
detected
by
Immunohistochemistry.
Finally,
tumorigenesis
experiments
nude
mice
further
demonstrated
could
promote
occurrence
GC,
while
deletion
GC.
summary,
highly
expressed
tissues,
helpful
for
differential
diagnosis
pathological
grade
mucosal
lesions.
might
regulate
through
signaling
pathway
JAK-STAT3
inflammatory
pathway,
thus
ultimately
affecting
cells.
International Journal of Molecular Sciences,
Год журнала:
2023,
Номер
24(5), С. 4814 - 4814
Опубликована: Март 2, 2023
Mucin1
(MUC1),
a
glycoprotein
associated
with
an
aggressive
cancer
phenotype
and
chemoresistance,
is
aberrantly
overexpressed
in
subset
of
clear
cell
renal
carcinoma
(ccRCC).
Recent
studies
suggest
that
MUC1
plays
role
modulating
metabolism,
but
its
regulating
immunoflogosis
the
tumor
microenvironment
remains
poorly
understood.
In
previous
study,
we
showed
pentraxin-3
(PTX3)
can
affect
ccRCC
by
activating
classical
pathway
complement
system
(C1q)
releasing
proangiogenic
factors
(C3a,
C5a).
this
scenario,
evaluated
PTX3
expression
analyzed
potential
activation
on
site
immune
modulation,
stratifying
samples
tumors
high
(MUC1H)
versus
low
(MUC1L).
We
found
tissue
was
significantly
higher
MUC1H
ccRCC.
addition,
C1q
deposition
expressions
CD59,
C3aR,
C5aR
were
extensively
present
colocalized
PTX3.
Finally,
increased
number
infiltrating
mast
cells,
M2-macrophage,
IDO1+
reduced
CD8+
T
cells.
Taken
together,
our
results
modulate
infiltrate,
promoting
immune-silent
microenvironment.
Journal of Translational Medicine,
Год журнала:
2023,
Номер
21(1)
Опубликована: Март 13, 2023
Abstract
Background
The
incidence
and
mortality
of
gastric
cancer
ranks
fifth
fourth
worldwide
among
all
malignancies,
respectively.
Accumulating
evidences
have
revealed
the
close
relationship
between
mitochondrial
dysfunction
initiation
progression
stomach
cancer.
However,
rare
prognostic
models
for
mitochondrial-related
gene
risk
been
built
up
in
Methods
In
current
study,
expression
value
genes
adenocarcinoma
(STAD)
patients
were
systematically
analyzed
to
establish
a
model
based
on
available
TCGA
GEO
databases.
tumor
microenvironment
(TME),
immune
cell
infiltration,
mutation
burden,
drug
sensitivity
also
investigated
using
R
language,
GraphPad
Prism
8
online
Results
We
established
including
NOX4,
ALDH3A2,
FKBP10
MAOA
validated
its
predictive
power.
This
indicated
that
infiltration
high-risk
group
was
significantly
different
from
low-risk
group.
Besides,
score
closely
related
TME
signature
checkpoint
molecules,
suggesting
immunosuppressive
might
lead
poor
prognosis
groups.
Moreover,
TIDE
analysis
demonstrated
combined
score,
or
stromal
microsatellite
status
could
more
effectively
predict
benefit
immunotherapy
STAD
with
stratifications.
Finally,
rapamycin,
PD-0325901
dasatinib
found
be
effective
group,
whereas
AZD7762,
CEP-701
methotrexate
predicted
Conclusions
Our
results
suggest
reliable
biomarker
personalized
treatment
patients.