Development of an efficient, effective, and economical technology for proteome analysis DOI Creative Commons
Katherine R. Martin,

Ha T. Le,

Ahmed Abdelgawad

и другие.

Cell Reports Methods, Год журнала: 2024, Номер 4(6), С. 100796 - 100796

Опубликована: Июнь 1, 2024

We present an efficient, effective, and economical approach, named E3technology, for proteomics sample preparation. By immobilizing silica microparticles into the polytetrafluoroethylene matrix, we develop a robust membrane medium, which could serve as reliable platform to generate proteomics-friendly samples in rapid low-cost fashion. benchmark its performance using different formats demonstrate them with variety of types varied complexity, quantity, volume. Our data suggest that E3technology provides proteome-wide identification quantitation equivalent or superior many existing methods. further propose enhanced single-vessel E4technology, performs on-filter in-cell digestion minimal loss high sensitivity, enabling low-input low-cell proteomics. Lastly, utilized above technologies investigate RNA-binding proteins profile intact bacterial cell proteome.

Язык: Английский

Instrumentation at the Leading Edge of Proteomics DOI
Trenton M. Peters-Clarke, Joshua J. Coon, Nicholas M. Riley

и другие.

Analytical Chemistry, Год журнала: 2024, Номер 96(20), С. 7976 - 8010

Опубликована: Май 13, 2024

ADVERTISEMENT RETURN TO ISSUEPREVReviewNEXTInstrumentation at the Leading Edge of ProteomicsTrenton M. Peters-ClarkeTrenton Peters-ClarkeDepartment Chemistry, University Wisconsin─Madison, Madison, Wisconsin 53706, United StatesDepartment Biomolecular StatesMore by Trenton Peters-ClarkeView Biographyhttps://orcid.org/0000-0002-9153-2525, Joshua J. CoonJoshua CoonDepartment StatesMorgridge Institute for Research, 53715, CoonView Biographyhttps://orcid.org/0000-0002-0004-8253, and Nicholas Riley*Nicholas RileyDepartment Washington, Seattle, Washington 98195, States*Email: [email protected]More RileyView Biographyhttps://orcid.org/0000-0002-1536-2966Cite this: Anal. Chem. 2024, 96, 20, 7976–8010Publication Date (Web):May 13, 2024Publication History Received6 October 2023Accepted19 April 2024Revised17 2024Published online13 May inissue 21 2024https://pubs.acs.org/doi/10.1021/acs.analchem.3c04497https://doi.org/10.1021/acs.analchem.3c04497review-articleACS PublicationsCopyright © 2024 American Chemical SocietyRequest reuse permissionsArticle Views2104Altmetric-Citations-LEARN ABOUT THESE METRICSArticle Views are COUNTER-compliant sum full text article downloads since November 2008 (both PDF HTML) across all institutions individuals. These metrics regularly updated to reflect usage leading up last few days.Citations number other articles citing this article, calculated Crossref daily. Find more information about citation counts.The Altmetric Attention Score is a quantitative measure attention that research has received online. Clicking on donut icon will load page altmetric.com with additional details score social media presence given article. how calculated. Share Add toView InAdd Full Text ReferenceAdd Description ExportRISCitationCitation abstractCitation referencesMore Options onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose SUBJECTS:Dissociation,Ions,Mass spectrometry,Peptides proteins,Proteomics Get e-Alerts

Язык: Английский

Процитировано

21

Development of an efficient, effective, and economical technology for proteome analysis DOI Creative Commons
Katherine R. Martin,

Ha T. Le,

Ahmed Abdelgawad

и другие.

Cell Reports Methods, Год журнала: 2024, Номер 4(6), С. 100796 - 100796

Опубликована: Июнь 1, 2024

We present an efficient, effective, and economical approach, named E3technology, for proteomics sample preparation. By immobilizing silica microparticles into the polytetrafluoroethylene matrix, we develop a robust membrane medium, which could serve as reliable platform to generate proteomics-friendly samples in rapid low-cost fashion. benchmark its performance using different formats demonstrate them with variety of types varied complexity, quantity, volume. Our data suggest that E3technology provides proteome-wide identification quantitation equivalent or superior many existing methods. further propose enhanced single-vessel E4technology, performs on-filter in-cell digestion minimal loss high sensitivity, enabling low-input low-cell proteomics. Lastly, utilized above technologies investigate RNA-binding proteins profile intact bacterial cell proteome.

Язык: Английский

Процитировано

7