Transcriptome Analysis of Early Lateral Root Formation in Tomato DOI Creative Commons
Aiai Zhang, Qingmao Shang

Plants, Год журнала: 2024, Номер 13(12), С. 1620 - 1620

Опубликована: Июнь 12, 2024

Lateral roots (LRs) receive signals from the inter-root environment and absorb water nutrients soil. Auxin regulates LR formation, but mechanism in tomato remains largely unknown. In this study, 'Ailsa Craig' LRs appeared on third day were unevenly distributed primary roots. According to location of occurrence, divided into three equal parts: shootward part root (RB), middle (RM), tip (RT). Transverse sections days 1 6 revealed that number RB cells diameter significantly increased compared with RM RT. Using 3, we carried out transcriptome sequencing analysis. Identified genes classified 16 co-expression clusters based K-means, four associated highly expressed RB. These (3, 5, 8, 16) enriched cellulose metabolism, microtubule, peptide metabolism pathways, all closely related development. The contain numerous transcription factors linked development including

Язык: Английский

Effects and Mechanism of Auxin and Its Inhibitors on Root Growth and Mineral Nutrient Absorption in Citrus (Trifoliate Orange, Poncirus trifoliata) Seedlings via Its Synthesis and Transport Pathways DOI Creative Commons

Yuwei Yang,

Ying Shi, Cuiling Tong

и другие.

Agronomy, Год журнала: 2025, Номер 15(3), С. 719 - 719

Опубликована: Март 16, 2025

As an endogenous hormone, auxin plays a crucial role in regulating plants’ growth and development, also the responses to abiotic stresses. However, effects mechanism of its inhibitors on plant mineral nutrient absorption citrus have not been thoroughly studied. Therefore, we used trifoliate orange (citrus’s rootstock, Poncirus trifoliata) as experimental material supplement research content this area. The seedlings were treated with exogenous (indolebutyric acid, IBA) inhibitor (2-naphthoxyacetic 2-NOA) sand culture system. results showed that compared control, (1.0 µmol L−1 significantly enhanced taproot length, lateral root number by 17.56%, 123.07%, 88.89%, respectively, while markedly elevating levels nitrogen (N), phosphorus (P), potassium (K), copper (Cu), zinc (Zn) 14.29%, 45.61%, 23.28%, 42.86%, 59.80%, respectively. Again (50.0 dramatically reduced 21.37%, 10.25%, 43.33%, decreasing N, magnesium (Mg), iron (Fe), Cu, Zn 7.94%, 10.42%, 24.65%, 39.25%, 18.76%, Furthermore, IBA increased accumulation hair, stele, epidermal tissues taproots, promoted up-regulation synthesis genes (TAR2, YUC3, YUC4, YUC6, YUC8) transport (ABCB1, ABCB19, AUX1, LAX1, LAX2, PIN1, PIN3, PIN4). In contrast, 2-NOA decreased was involved down-regulation YUC6) LAX3, PIN3). Interestingly, elevated level specifically tip taproot. disrupts reflux from hair through genes, thereby creating localized (i.e., zone tissues) deficiencies compromise system architecture acquisition capacity. According study, analogs could regulate pathways.

Язык: Английский

Процитировано

0

Thymol Stimulates Lateral Root Formation via Regulating Endogenous Reactive Oxygen Species DOI Creative Commons
Jiajun Li, Jian Chen,

Yini Hao

и другие.

Agronomy, Год журнала: 2025, Номер 15(4), С. 784 - 784

Опубликована: Март 23, 2025

The application of an environmentally friendly plant growth regulator to regulate and development represents a promising strategy for sustainable agriculture. Thymol is kind plant-derived natural compound. We have found that thymol potential biostimulant with the capability trigger defense against abiotic stresses. Little known about whether how modulates root system architecture. In this study, physiological, histochemical, molecular approaches were applied identify role in promoting lateral watermelon seedlings. significantly promoted LRP (lateral primordia) initiation formation. Rboh (respiratory burst oxidase homolog)-dependent reactive oxygen species (ROS) generation was involved thymol-promoted from LRP. Then, gene family nine members (ClRboh1–ClRboh9) identified genome. induced expression set ClRbohs roots. These results suggested able stimulate formation by triggering Rboh-dependent ROS production. findings may help understand biological function as elicitor both fundamental study.

Язык: Английский

Процитировано

0

Phenotypic characteristics and transcriptome of wax gourd embryonic root development under high auxin stress DOI Creative Commons
Xuejiao Cheng, Jeong-Ki Hong, X.Q. Zhai

и другие.

Vegetable Research, Год журнала: 2025, Номер 5(1), С. 0 - 0

Опубликована: Янв. 1, 2025

Язык: Английский

Процитировано

0

Root growth and branching are enabled by brassinosteroid-regulated growth anisotropy and carbon allocation DOI Creative Commons
Hitaishi Khandal, Guy Horev, Bas van den Herik

и другие.

Nature Communications, Год журнала: 2025, Номер 16(1)

Опубликована: Апрель 28, 2025

Plants function as an integrated system of interconnected organs, with shoots and roots mutually influencing each other. Brassinosteroid (BR) signaling is essential for whole-plant growth, yet the relative importance shoot versus root BR in shaping architecture (RSA) remains unclear. Here, we directly tackle this question using micro-grafts between wild-type BR-null mutants both Arabidopsis tomato, assisted by phenotyping, transcriptomics, metabolic profiling, transmission electron microscopy, modeling approaches. These analyses demonstrate that BR, determining carbon availability, allows a full rescue mutant biomass, while loss attenuates growth. In parallel, dictates spatial distribution along root, through local regulation growth anisotropy cell wall thickness, morphology. A newly developed "grow branch" simulation model demonstrates these shoot- root-derived effects are sufficient to explain predict dynamics branching phenotype wild-type, BR-deficient mutants, micro-graft combinations. Our interdisciplinary approach, applied two plant species integrating hormonal functions, provides new understanding how RSA modulated at various scales.

Язык: Английский

Процитировано

0

Transcriptome Analysis of Early Lateral Root Formation in Tomato DOI Creative Commons
Aiai Zhang, Qingmao Shang

Plants, Год журнала: 2024, Номер 13(12), С. 1620 - 1620

Опубликована: Июнь 12, 2024

Lateral roots (LRs) receive signals from the inter-root environment and absorb water nutrients soil. Auxin regulates LR formation, but mechanism in tomato remains largely unknown. In this study, 'Ailsa Craig' LRs appeared on third day were unevenly distributed primary roots. According to location of occurrence, divided into three equal parts: shootward part root (RB), middle (RM), tip (RT). Transverse sections days 1 6 revealed that number RB cells diameter significantly increased compared with RM RT. Using 3, we carried out transcriptome sequencing analysis. Identified genes classified 16 co-expression clusters based K-means, four associated highly expressed RB. These (3, 5, 8, 16) enriched cellulose metabolism, microtubule, peptide metabolism pathways, all closely related development. The contain numerous transcription factors linked development including

Язык: Английский

Процитировано

3