Journal of Thoracic Disease,
Год журнала:
2023,
Номер
15(11), С. 6265 - 6278
Опубликована: Ноя. 1, 2023
Background:
N7-methylguanosine
(m7G)
is
an
important
posttranscriptional
modification
affecting
mRNA
and
tRNA
functions
stability.
The
genes
regulating
the
m7G
process
have
been
previously
found
involved
in
carcinogenesis
process.
We
aimed
to
analyze
role
of
m7G-related
as
potential
prognostic
markers
for
lung
squamous
cell
carcinoma
(LSCC).
Methods:
Twenty-nine
were
selected
analysis
LSCC
cohort
Cancer
Genome
Atlas
(TCGA).
Univariate,
multivariate,
Kaplan-Meier
analyses
used
evaluate
predictive
value
risk
model
developed
with
signature
overall
survival
(OS)..
Gene
Ontology
(GO)
Kyoto
Encyclopedia
Genes
Genomes
(KEGG)
pathway
enrichment
differentially
expressed
(DEGs)
performed
high-
low-risk
groups.
Results:
identified
17
methylation-related
versus
normal
tissues.
expression
five
(EIF3D,
LSM1,
NCBP2,
NUDT10,
NUDT11)
was
independent
marker
OS
patients.
A
these
predicted
2-,
3-year
rates
0.623
0.626,
respectively.
score
significantly
correlated
OS:
patients
a
higher
had
shorter
(P<0.01)
it
associated
lower
immune
response
(P<0.01).
Conclusions:
novel
gene
that
can
be
great
utility
predict
prognosis
LSCC.
International Journal of Molecular Sciences,
Год журнала:
2024,
Номер
25(22), С. 12043 - 12043
Опубликована: Ноя. 9, 2024
Multiple
studies
have
demonstrated
the
significant
effects
of
physical
exercise
on
brain
plasticity,
enhancement
memory
and
cognition,
mood
improvement.
Although
beneficial
impact
functions
mental
health
is
well
established,
exact
mechanisms
underlying
this
phenomenon
are
currently
under
thorough
investigation.
Several
hypotheses
emerged
suggesting
various
possible
mechanisms,
including
hormones,
neurotrophins,
neurotransmitters,
more
recently
also
other
compounds
such
as
lactate
or
irisin,
which
released
circumstances
act
both
locally
or/and
distant
tissues,
triggering
systemic
body
reactions.
Nevertheless,
none
these
actually
explain
long-lasting
effect
exercise,
can
persist
for
years
even
be
passed
to
subsequent
generations.
It
believed
that
mediated
through
epigenetic
modifications,
influencing
expression
particular
genes
translation
modification
specific
proteins.
This
review
explores
regular
function
plasticity
associated
occurrence
modifications.
examines
how
changes
contribute
prevention
treatment
neuropsychiatric
neurological
disorders,
their
influence
natural
aging
process
health.
Genes,
Год журнала:
2022,
Номер
13(12), С. 2381 - 2381
Опубликована: Дек. 16, 2022
Chronic
lung
diseases
are
highly
prevalent
worldwide
and
cause
significant
mortality.
Lung
cancer
is
the
end
stage
of
many
chronic
diseases.
RNA
epigenetics
can
dynamically
modulate
gene
expression
decide
cell
fate.
Recently,
studies
have
confirmed
that
plays
a
crucial
role
in
developing
Further
exploration
underlying
mechanisms
diseases,
including
cancer,
may
lead
to
better
understanding
promote
development
new
biomarkers
therapeutic
strategies.
This
article
reviews
basic
information
on
modifications,
N6
methylation
adenosine
(m6A),
N1
(m1A),
N7-methylguanosine
(m7G),
5-methylcytosine
(m5C),
2'O-methylation
(2'-O-Me
or
Nm),
pseudouridine
(5-ribosyl
uracil
Ψ),
inosine
editing
(A-to-I
editing).
We
then
show
how
they
relate
different
types
disease.
paper
hopes
summarize
modification
disease
finds
way
develop
early
diagnosis
treatment
PeerJ,
Год журнала:
2023,
Номер
11, С. e15054 - e15054
Опубликована: Март 23, 2023
Background
The
aim
of
this
study
is
to
investigate
the
genetic
and
epigenetic
mechanisms
involved
in
pathogenesis
age-related
cataract
(ARC).
Methods
We
obtained
transcriptome
datafile
th
ree
ARC
samples
three
healthy,
age-matched
used
differential
expression
analyses
identify
differentially
expressed
genes
(DEGs).
lncRNA-associated
competing
endogenous
(ceRNA)
network,
protein-protein
network
(PPI)
were
constructed
using
Cytoscape
STRING.
Cluster
performed
underlying
molecular
hub
affecting
progression.
To
verify
immune
status
patients,
immune-associated
also
conducted.
Results
PPI
identified
FOXO1
gene
as
with
highest
score,
calculated
by
Maximal
Clique
Centrality
(MCC)
algorithm.
ceRNA
lncRNAs
H19,
XIST,
TTTY14,
MEG3
FOXO1,
NOTCH3,
CDK6,
SPRY2,
CA2
playing
key
roles
regulating
ARC.
Additionally,
showed
no
significant
correlation
an
response
but
highly
correlated
cell
metabolism,
including
cysteine,
methionine,
galactose.
Discussion
findings
may
provide
clues
toward
pathogenic
be
significance
for
future
therapeutic
research.
Biochemical Society Transactions,
Год журнала:
2023,
Номер
51(2), С. 783 - 796
Опубликована: Апрель 4, 2023
Ageing
is
a
conserved
and
unavoidable
biological
process
characterized
by
progressive
decline
of
physiological
functions
with
time.
Despite
constituting
the
greatest
risk
factor
for
most
human
diseases,
little
known
about
molecular
mechanisms
driving
ageing
process.
More
than
170
chemical
RNA
modifications,
also
as
epitranscriptome,
decorate
eukaryotic
coding
non-coding
RNAs
have
emerged
novel
regulators
metabolism,
modulating
stability,
translation,
splicing
or
processing.
Studies
on
short-lived
organisms
such
yeast
worms
connect
mutations
modifying
enzymes
lifespan
changes,
dysregulation
epitranscriptome
has
been
linked
to
age-related
diseases
hallmarks
themselves
in
mammals.
Moreover,
transcriptome-wide
analyses
are
starting
reveal
changes
messenger
modifications
neurodegenerative
expression
some
modifiers
age.
These
studies
put
focus
potential
regulator
lifespan,
open
new
avenues
identification
targets
treat
diseases.
In
this
review,
we
discuss
connection
between
enzymatic
machinery
regulating
their
deposition
RNAs,
hypothesize
role
regulation
other
ncRNAs
playing
key
ageing,
transposable
elements
tRNA
fragments.
Finally,
reanalyze
available
datasets
mouse
tissues
during
report
wide
transcriptional
proteins
involved
deposition,
removal
decoding
several
best-known
modifications.
Journal of Thoracic Disease,
Год журнала:
2023,
Номер
15(11), С. 6265 - 6278
Опубликована: Ноя. 1, 2023
Background:
N7-methylguanosine
(m7G)
is
an
important
posttranscriptional
modification
affecting
mRNA
and
tRNA
functions
stability.
The
genes
regulating
the
m7G
process
have
been
previously
found
involved
in
carcinogenesis
process.
We
aimed
to
analyze
role
of
m7G-related
as
potential
prognostic
markers
for
lung
squamous
cell
carcinoma
(LSCC).
Methods:
Twenty-nine
were
selected
analysis
LSCC
cohort
Cancer
Genome
Atlas
(TCGA).
Univariate,
multivariate,
Kaplan-Meier
analyses
used
evaluate
predictive
value
risk
model
developed
with
signature
overall
survival
(OS)..
Gene
Ontology
(GO)
Kyoto
Encyclopedia
Genes
Genomes
(KEGG)
pathway
enrichment
differentially
expressed
(DEGs)
performed
high-
low-risk
groups.
Results:
identified
17
methylation-related
versus
normal
tissues.
expression
five
(EIF3D,
LSM1,
NCBP2,
NUDT10,
NUDT11)
was
independent
marker
OS
patients.
A
these
predicted
2-,
3-year
rates
0.623
0.626,
respectively.
score
significantly
correlated
OS:
patients
a
higher
had
shorter
(P<0.01)
it
associated
lower
immune
response
(P<0.01).
Conclusions:
novel
gene
that
can
be
great
utility
predict
prognosis
LSCC.