The integration of whole‐genome resequencing and ecological niche modelling to conserve profiles of local adaptation DOI Creative Commons
Jong Yoon Jeon, Yucheol Shin, Andrew J. Mularo

и другие.

Diversity and Distributions, Год журнала: 2024, Номер 30(6)

Опубликована: Апрель 11, 2024

Abstract Background Ecological and genomic attributes of populations can provide two orthologous perspectives on the biological profiles associated with local adaptation. The ability organisms to track suitable habitats (ecological adaptability) shift allele frequencies (adaptive potential) are prerequisite for population sustainability. Aims Many contemporary threatened by habitat loss vulnerability) a lack adaptive potential (evolutionary vulnerability). Technical advances new opportunities address these challenges in conservation: Future shifts be predicted ecological niche modelling genetic diversity discerned using genome sequence data. Together, approaches illuminate adaptation profile help identify environmental conditions that should maximize evolutionary fitness. Materials Methods Here, we reviewed primary literature key studies utilize both whole‐genome resequencing (WGR) (ENM) an effort envisage future research directions may benefit conservation efforts. Results We identified ways integrate different approaches, such as ENM‐informed genomics genomics‐informed ENMs, used delineate conserve profiles. Discussion Integrative characteristics, vulnerable subject changes, patterns from geographic analyses. discuss directions, limitations their solutions suggestions collaborative workflows. Conclusion integration WGR ENM is promising continuous advancement. An integrative approach evaluate eco‐evolutionary attributes, at organismal molecular levels,

Язык: Английский

Foundations and Future Directions for Causal Inference in Ecological Research DOI
Katherine Siegel, Laura E. Dee

Ecology Letters, Год журнала: 2025, Номер 28(1)

Опубликована: Янв. 1, 2025

ABSTRACT Ecology often seeks to answer causal questions, and while ecologists have a rich history of experimental approaches, novel observational data streams the need apply insights across naturally occurring conditions pose opportunities challenges. Other fields developed inference approaches that can enhance expand our ability ecological questions using or data. However, lack comprehensive resources applying settings jargon from multiple disciplines creates barriers. We introduce for inference, discussing main frameworks counterfactual how differs other research aims key challenges; application in quasi‐experimental study designs; appropriate interpretation results given their assumptions biases; foundational papers; requirements trade‐offs between internal external validity posed by different designs. highlight these designs generally prioritise over generalisability. Finally, we identify considerations further integrate with synthesis science meta‐analysis spatiotemporal scales at which is possible. advocate ecology as field collectively define best practices inference.

Язык: Английский

Процитировано

2

Accounting for functionality in the identification of global conservation priorities: promises and pitfalls DOI
Ana S. L. Rodrigues

Philosophical Transactions of the Royal Society B Biological Sciences, Год журнала: 2025, Номер 380(1917)

Опубликована: Янв. 9, 2025

Whereas preventing species extinctions remains a central objective of conservation efforts, it must be complemented by the long-term preservation functional ecosystems and benefits humans derive from them. Here, I review recent approaches that explicitly account for functionality in setting large-scale priorities, discussing their promise while highlighting challenges pitfalls. Crossing data on species' distributions ecological traits has enabled mapping global patterns diversity rarity identification stand out distinctiveness. However, priorities identified through these general indices do not directly address ecosystem functionality, instead, they are methods ensuring representation individual as intrinsically valuable biodiversity elements. Three other integrate into taking specific context each ecosystem, site or species: International Union Conservation Nature's Red List Ecosystems, Key Biodiversity Areas Green Status Species. Currently at various stages development, testing implementation, playing an increasingly important role definition, implementation monitoring global- national-scale strategies to ensure persistence functions associated services.This article is part discussion meeting issue 'Bending curve towards nature recovery: building Georgina Mace's legacy biodiverse future'.

Язык: Английский

Процитировано

1

Bacterial communities as bioindicators of climate change in freshwater ecosystems: Tank bromeliads as model systems DOI Creative Commons
Daniel Di Pace Soares Penna, Gustavo Q. Romero, Mark P. Nessel

и другие.

Ecological Indicators, Год журнала: 2025, Номер 171, С. 113161 - 113161

Опубликована: Янв. 31, 2025

Язык: Английский

Процитировано

1

The influence of elevation on genetic structure and variability in a wetland crucifer of the Rocky Mountains DOI Open Access
Shelby Tisinai, Jeremiah W. Busch

American Journal of Botany, Год журнала: 2025, Номер unknown

Опубликована: Фев. 6, 2025

Abstract Premise In mountain ecosystems, environmental conditions (e.g., temperature, ultraviolet radiation) covary with elevation, potentially limiting gene flow over steep gradients. We hypothesized that, (1) due to stark elevational differences in factors, populations from dissimilar elevations montane versus alpine) are more strongly differentiated than similar elevations; (2) patterns of migration reflect downslope dispersal upslope dispersal; and (3) alpine at the cold edge show evidence expansion, while warm have declined. Methods DNA polymorphisms whole‐genome sequences were studied 6–10 genotypes each Cardamine cordifolia found three sites (ranging 2200 2800 m a.s.l.) 3000 3500 a.s.l.). Statistical analyses assessed population structure, genetic diversity, migration, historical demography since Pleistocene. Results Populations maintained very high levels nucleotide diversity (π range: 0.062–0.071) weakly (pairwise F ST = 0.027) on average. Migration among was also inferred, no directionality across elevation bands. Demographic inference suggests that both declined size Conclusions Environmental represent diffuse barriers flow. Recent polyploidy clonal reproduction likely explain excess heterozygosity within populations. The similarity highly connected refugia during Pleistocene; such results may indicate will respond similarly changing associated climate change.

Язык: Английский

Процитировано

1

Temporal dynamics of Grime's CSR strategies in plant communities during 60 years of succession DOI

Yan‐song Zhang,

Scott J. Meiners, Yani Meng

и другие.

Ecology Letters, Год журнала: 2024, Номер 27(6)

Опубликована: Май 30, 2024

Abstract Grime's competitive, stress‐tolerant, ruderal (CSR) theory predicts a shift in plant communities from to stress‐tolerant strategies during secondary succession. However, this fundamental tenet lacks empirical validation using long‐term continuous successional data. Utilizing 60‐year longitudinal data of old‐field succession, we investigated the community‐level dynamics over time. Our findings reveal that while generally transitioned initial abandonment conditions crucially shaped early strategies, leading varied strategy trajectories across different fields. Furthermore, found notable divergence CSR alien and native species Initially, exhibited similar but later stages, higher lower stress tolerance compared species. Overall, our underscore applicability predictions regarding temporal shifts depending on both community origin.

Язык: Английский

Процитировано

8

Mixing of pine and arbuscular mycorrhizal tree species changed soil organic carbon storage by affecting soil microbial characteristics DOI

Yaoxiong Wang,

Yunchao Zhou, Fenghua Tang

и другие.

The Science of The Total Environment, Год журнала: 2024, Номер 930, С. 172630 - 172630

Опубликована: Апрель 26, 2024

Язык: Английский

Процитировано

6

Temperature and biodiversity influence community stability differently in birds and fishes DOI
Shyamolina Ghosh, Blake Matthews, Owen L. Petchey

и другие.

Nature Ecology & Evolution, Год журнала: 2024, Номер 8(10), С. 1835 - 1846

Опубликована: Авг. 7, 2024

Язык: Английский

Процитировано

6

Geo-evolutionary feedbacks: integrating rapid evolution and landscape change DOI
Xiaoli Dong, Maya F. Stokes, Andrew P. Hendry

и другие.

Trends in Ecology & Evolution, Год журнала: 2024, Номер 39(9), С. 863 - 876

Опубликована: Июнь 12, 2024

Язык: Английский

Процитировано

4

Climate Change DOI
Omar Defeo,

Anton McLachlan

Elsevier eBooks, Год журнала: 2025, Номер unknown, С. 561 - 606

Опубликована: Янв. 1, 2025

Процитировано

0

Dual-Domain Primary Succession of Bacteria in Glacier Forefield Streams and Soils of a Maritime and Continental Glacier DOI Creative Commons
Ze Ren, Hongkai Gao, Nicolás Martyniuk

и другие.

Microbial Ecology, Год журнала: 2025, Номер 88(1)

Опубликована: Фев. 15, 2025

Glaciers retreat rapidly and create newly exposed terrestrial aquatic habitats in glacier forefields, where primary succession proceeds synchronously forefields. Here, we introduced the "Dual-Domain Primary Succession" concept to examine parallel yet distinct processes soil stream ecosystems within by focusing on Hailuogou Glacier Urumqi No.1 China. Findings showed that bacterial communities exhibited higher α-diversity with a decreasing pattern Glacier, contrast No.1, which displayed lower unimodally distributed along forefield chronosequence (GFC). A similar emerged streams, except for an increasing trend GFC. Additionally, streams changed more than soils but slowly No.1. Along GFC, both experienced spatial variations, primarily due species turnover. The of community composition was evident at OTU level, each module co-occurrence network consisting OTUs enriched specific successional stages. substantial number shared between paired samples while β-diversity increased. results suggested have different pace having trajectories studied glaciers. This study highlighted further studies glaciers are necessary make broader generalizations.

Язык: Английский

Процитировано

0