Abstract
The
absence
of
robust
interspecific
isolation
barriers
among
pantherines,
including
the
iconic
South
American
jaguar
(
Panthera
onca
),
led
us
to
study
molecular
evolution
typically
rapidly
evolving
reproductive
proteins
within
this
subfamily
and
related
groups.
In
study,
we
delved
into
evolutionary
forces
acting
on
zona
pellucida
(ZP)
gamete
interaction
protein
family
sperm‐oocyte
fusion
pair
IZUMO1‐JUNO
across
Carnivora
order,
distinguishing
between
Caniformia
Feliformia
suborders
anticipating
few
significant
diversifying
changes
in
Pantherinae
subfamily.
A
chromosome‐resolved
genome
assembly
facilitated
coding
sequences,
enabling
reconstruction
histories.
Examining
sequence
variability
more
than
30
species
revealed
that
exhibited
significantly
lower
diversity
compared
its
sister
taxa,
.
Molecular
analyses
ZP2
ZP3,
subunits
directly
involved
sperm‐recognition,
unveiled
positive
selection
,
although
no
were
linked
sperm
binding.
Structural
cross‐linking
ZP
subunits,
ZP4
ZP1
levels
or
complete
selection.
Notably,
IZUMO1
displayed
prominent
signatures
sites
basal
lineages
both
extending
along
subtree
but
absent
Conversely,
JUNO
did
not
exhibit
any
tested
clades.
Eight
Caniformia‐specific
selected
detected
two
JUNO‐interaction
clusters.
Our
findings
provide
for
first
time
insights
trajectories
order.
Proceedings of the National Academy of Sciences,
Год журнала:
2021,
Номер
118(10)
Опубликована: Фев. 19, 2021
The
current
rate
of
species
extinction
is
rapidly
approaching
unprecedented
highs
and
life
on
Earth
presently
faces
a
sixth
mass
event
driven
by
anthropogenic
activity,
climate
change
ecological
collapse.
field
conservation
genetics
aims
at
preserving
using
their
levels
genetic
diversity,
usually
measured
as
neutral
genome-wide
barometer
for
evaluating
population
health
risk.
A
fundamental
assumption
that
higher
diversity
lead
to
an
increase
in
fitness
long-term
survival
species.
Here,
we
argue
against
the
perceived
importance
wild
populations
We
demonstrate
no
simple
general
relationship
exists
between
risk
extinction.
Instead,
better
understanding
properties
functional
demographic
history,
relationships,
necessary
developing
implementing
effective
strategies.
Proceedings of the National Academy of Sciences,
Год журнала:
2021,
Номер
119(1)
Опубликована: Дек. 20, 2021
About
50
y
ago,
Crow
and
Kimura
[
An
Introduction
to
Population
Genetics
Theory
(1970)]
Ohta
Genet.
Res.
22,
201–204
(1973)]
laid
the
foundations
of
conservation
genetics
by
predicting
relationship
between
population
size
genetic
marker
diversity.
This
work
sparked
an
enormous
research
effort
investigating
importance
dynamics,
in
particular
small
size,
for
mean
performance,
viability,
evolutionary
potential.
In
light
a
recent
perspective
[J.
C.
Teixeira,
D.
Huber,
Proc.
Natl.
Acad.
Sci.
U.S.A.
118,
10
(2021)]
that
challenges
some
fundamental
assumptions
genetics,
it
is
timely
summarize
what
field
has
achieved,
robust
patterns
have
emerged,
worthwhile
future
directions.
We
consider
theory
methodological
breakthroughs
helped
management,
we
outline
applied
genetics.
Evolutionary Applications,
Год журнала:
2020,
Номер
14(3), С. 634 - 652
Опубликована: Окт. 24, 2020
Abstract
Animal
and
plant
species
around
the
world
are
being
challenged
by
deleterious
effects
of
inbreeding,
loss
genetic
diversity,
maladaptation
due
to
widespread
habitat
destruction
rapid
climate
change.
In
many
cases,
interventions
will
likely
be
needed
safeguard
populations
maintain
functioning
ecosystems.
Strategies
aimed
at
initiating,
reinstating,
or
enhancing
patterns
gene
flow
via
deliberate
movement
genotypes
environment
generating
growing
interest
with
broad
applications
in
conservation
environmental
management.
These
diverse
strategies
go
various
names
ranging
from
evolutionary
rescue
provenancing
resurrection.
Our
aim
here
is
provide
some
clarification
terminology
how
these
connected
linked
underlying
processes.
We
draw
on
case
studies
literature
outline
mechanisms
that
underlie
increase
fitness
impact
wider
community.
argue
understanding
leading
decline
community
a
key
successful
implementation
strategies.
emphasize
need
consider
nature
source
recipient
populations,
as
well
associated
risks
trade‐offs
for
This
overview
highlights
where
have
potential
population,
species,
ecosystem
scales,
but
also
they
should
probably
not
attempted
depending
overall
aims
intervention.
advocate
an
approach
short‐
long‐term
integrated
into
decision
framework
considers
nongenetic
aspects
Proceedings of the National Academy of Sciences,
Год журнала:
2021,
Номер
118(49)
Опубликована: Ноя. 30, 2021
Increasing
habitat
fragmentation
leads
to
wild
populations
becoming
small,
isolated,
and
threatened
by
inbreeding
depression.
However,
small
may
be
able
purge
recessive
deleterious
alleles
as
they
become
expressed
in
homozygotes,
thus
reducing
depression
increasing
population
viability.
We
used
whole-genome
sequences
from
57
tigers
estimate
individual
mutation
load
a
small-isolated
two
large-connected
India.
As
expected,
the
had
substantially
higher
average
genomic
(
Global Change Biology,
Год журнала:
2025,
Номер
31(2)
Опубликована: Фев. 1, 2025
Understanding
the
intricate
interplay
between
plant
and
soil
microbiomes
their
effects
on
growth
productivity
is
vital
in
a
rapidly
changing
climate.
This
review
explores
interconnected
impacts
of
climate
change
plant-soil
profound
agricultural
productivity.
The
ongoing
rise
global
temperatures,
shifting
precipitation
patterns
extreme
weather
events
significantly
affect
composition
function
microbial
communities
rhizosphere.
Changes
diversity
activity
due
to
rising
temperatures
impact
nutrient
cycling,
enzyme
synthesis,
health
pest
disease
management.
These
changes
also
influence
dynamics
microbe
capability
promote
health.
As
changes,
plants'
adaptive
capacity
partners
become
increasingly
crucial
for
sustaining
agriculture.
Mitigating
adverse
requires
comprehensive
understanding
mechanisms
driving
these
processes.
It
highlights
various
strategies
mitigating
adapting
environmental
challenges,
including
management,
stress-tolerant
crops,
cover
cropping,
sustainable
land
water
crop
rotation,
organic
amendments
development
climate-resilient
varieties.
emphasises
need
further
exploration
within
broader
context
change.
Promising
mitigation
strategies,
precision
agriculture
targeted
microbiome
modifications,
offer
valuable
pathways
future
research
practical
implementation
food
security
Trends in Ecology & Evolution,
Год журнала:
2021,
Номер
36(7), С. 637 - 650
Опубликована: Апрель 14, 2021
Deserts
are
among
the
harshest
environments
on
Earth.
The
multiple
ages
of
different
deserts
and
their
global
distribution
provide
a
unique
opportunity
to
study
repeated
adaptation
at
timescales.
Here,
we
summarize
recent
genomic
research
genetic
mechanisms
underlying
desert
adaptations
in
mammals.
Several
studies
mammals
show
large
overlap
functional
classes
genes
pathways,
consistent
with
complexity
variety
phenotypes
associated
water
food
scarcity
extreme
temperatures.
However,
also
challenged
by
lack
accurate
genotype-phenotype-environment
maps.
We
encourage
development
systems
that
facilitate
analyses,
but
acknowledge
need
for
more
wider
Models
are
useful
tools
for
understanding
and
predicting
ecological
patterns
processes.
Under
ongoing
climate
biodiversity
change,
they
can
greatly
facilitate
decision‐making
in
conservation
restoration
help
designing
adequate
management
strategies
an
uncertain
future.
Here,
we
review
the
use
of
spatially
explicit
models
decision
support
to
identify
key
gaps
current
modelling
restoration.
Of
650
reviewed
publications,
217
publications
had
a
clear
application
were
included
our
quantitative
analyses.
Overall,
studies
biased
towards
static
(79%),
species
population
level
(80%)
(rather
than
restoration)
applications
(71%).
Correlative
niche
most
widely
used
model
type.
Dynamic
as
well
gene‐to‐individual
community‐to‐ecosystem
underrepresented,
cost
optimisation
approaches
only
10%
studies.
We
present
new
typology
selecting
animal
restoration,
characterising
types
according
organisational
levels,
biological
processes
interest
desired
applications.
This
will
more
closely
link
goals.
Additionally,
future
efforts
need
overcome
important
challenges
related
data
integration,
integration
decision‐making.
conclude
with
five
recommendations,
suggesting
that
wider
usage
be
achieved
by
1)
developing
toolbox
multiple,
easier‐to‐use
methods,
2)
improving
calibration
validation
dynamic
3)
best‐practise
guidelines
applying
these
models.
Further,
robust
4)
combining
multiple
assess
uncertainty,
5)
placing
at
core
adaptive
management.
These
must
accompanied
long‐term
funding
monitoring,
improved
communication
between
research
practise
ensure
optimal
outcomes.