bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2023,
Номер
unknown
Опубликована: Дек. 19, 2023
Abstract
Bidirectional
communication
between
pathogenic
microbes
and
their
plant
hosts
via
small
(s)RNA-mediated
cross-kingdom
RNA
interference
(ckRNAi)
is
one
key
element
for
successful
host
colonisation.
However,
whether
mutualistic
fungi
from
the
Serendipitaceae
family,
known
extremely
broad
range,
employ
sRNAs
to
colonize
roots
still
under
discussion.
To
address
this
question,
we
developed
a
pipeline
validate
accumulation,
translocation,
activity
of
fungal
in
post-transcriptional
silencing
Arabidopsis
thaliana
genes.
Using
stem-loop
PCR,
detected
expression
specific
set
Serendipita
indica
(
Si)
sRNAs,
targeting
genes
involved
cell
wall
organization,
hormonal
signalling
regulation,
immunity,
gene
regulation.
confirm
these
sRNA
cells,
Si
were
transiently
expressed
protoplasts.
Stem-loop
PCR
proved
while
qPCR
validated
predicted
target
Furthermore,
ARGONAUTE
1
immunoprecipitation
At
AGO1-IP)
revealed
loading
into
RNAi
machinery,
suggesting
translocation
fungus
root
cells.
In
conclusion,
study
provides
blueprint
rapid
selection
analysis
effectors
plant-microbe
interactions
further
suggests
Sebacinoid
symbiosis.
Highlight
Small
RNAs
beneficial
are
translocated
silence
at
onset
interaction,
revealing
sebacinoid
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Апрель 19, 2024
Abstract
The
mutual
exchange
of
extracellular
vesicles
across
kingdom
borders
is
a
feature
many
plant-microbe
interactions.
occurrence
and
cargos
has
been
studied
in
several
instances,
but
their
dynamics
the
course
infection
have
remained
elusive.
Here
we
used
two
different
procedures,
differential
high-speed
centrifugation
polymer-based
enrichment,
to
collect
from
apoplastic
wash
fluid
barley
(
Hordeum
vulgare
)
leaves
challenged
by
its
fungal
powdery
mildew
pathogen,
Blumeria
hordei
.
Both
methods
yielded
similar
quality
morphological
characteristics,
though
polymer
approach
was
associated
with
higher
reproducibility.
We
noted
that
derived
constitute
polydisperse
populations
are
selectively
responsive
leaf
B.
Extracellular
∼100
nm
–
300
diameter
became
progressively
more
abundant,
particular
72
hours
post
inoculation
onwards,
resulting
major
peak
late
during
infection.
Vesicles
∼300
500
showed
accumulation
reached
much
lower
levels,
suggesting
they
might
separate
population.
Proteome
analysis
uncovered
an
enrichment
biotic
stress
response
proteins
vesicles.
t-SNARE
protein
Ror2,
ortholog
PEN1
marker
Arabidopsis
thaliana
,
accumulates
infection,
hence
also
qualifying
as
potential
protein.
Our
study
serves
starting
point
for
investigating
role
at
stages
Journal of Experimental Botany,
Год журнала:
2024,
Номер
unknown
Опубликована: Дек. 19, 2024
Abstract
Bidirectional
communication
between
pathogenic
microbes
and
their
plant
hosts
via
small
(s)RNA-mediated
cross-kingdom
RNA
interference
(ckRNAi)
is
a
key
element
for
successful
host
colonisation.
Whether
mutualistic
fungi
of
the
Serendipitaceae
family,
known
extremely
broad
range,
use
sRNAs
to
colonize
roots
still
under
debate.
To
address
this
question,
we
developed
pipeline
validate
accumulation,
translocation,
activity
fungal
in
post-transcriptional
silencing
Arabidopsis
thaliana
genes.
Using
stem-loop
RT-qPCR,
detected
expression
specific
set
Serendipita
indica
(Si)sRNAs,
targeting
genes
involved
cell
wall
organization,
hormonal
signalling
regulation,
immunity,
gene
regulation.
confirm
these
cells,
SisRNAs
were
transiently
expressed
protoplasts.
Stem-loop
PCR
confirmed
while
qPCR
validated
predicted
target
Furthermore,
ARGONAUTE
1
immunoprecipitation
(AtAGO1-IP)
revealed
loading
into
RNAi
machinery,
suggesting
translocation
SisRNA
from
fungus
root
cells.
In
conclusion,
study
provides
blueprint
rapid
selection
analysis
sRNA
effectors
further
supports
model
Sebacinoid
symbiosis.
Research Square (Research Square),
Год журнала:
2023,
Номер
unknown
Опубликована: Окт. 17, 2023
Abstract
Cross-kingdom
RNA
interference
(ckRNAi)
is
a
mechanism
of
interspecies
communication
where
small
RNAs
(sRNAs)
are
transported
from
one
organism
to
another,
they
silence
target
genes
in
trans1-9.
ckRNAi
well
established
pathosystems1-9
and
has
also
been
observed
number
mutualistic
interactions10,11.
Fungal
oomycete
pathogens,
as
symbiotic
bacterium,
send
sRNAs
into
host
cells
hijack
RNAi
machinery
by
loading
AGO
proteins
order
genes.
Previous
research
our
group
suggested
the
possibility
occurring
Arbuscular
Mycorrhizal
Symbiosis
(AMS)12,
most
widespread
ancient
symbiosis
on
Earth13.
Here,
we
show
that
specific
sRNA
AM
fungus
Rhizophagus
irregularis
(Rir2216)
loaded
an
AGO1
silencing
complex
plant
Medicago
truncatula,
leading
cleavage
transcript
encoding
for
MtWRKY69
transcription
factor.
downregulated
arbusculated
mycorrhizal
roots
overexpression
led
reduced
colonization
level,
indicating
its
relevant
AMS.
Thus,
present
first
experimental
evidence
molecular
Microorganisms,
Год журнала:
2024,
Номер
12(12), С. 2392 - 2392
Опубликована: Ноя. 22, 2024
Recent
advancements
in
the
field
of
plant–pathogen
interactions
have
spotlighted
role
extracellular
vesicles
(EVs)
as
pivotal
mediators
cross-kingdom
communication,
offering
new
vistas
for
enhancing
crop
protection
strategies.
EVs
are
instrumental
transport
small
regulatory
RNAs
(sRNAs)
and
other
bioactive
molecules
across
species
boundaries,
thus
playing
a
critical
molecular
warfare
between
plants
pathogens.
This
review
elucidates
sophisticated
mechanisms
by
which
utilize
to
dispatch
sRNAs
that
silence
pathogenic
genes,
fortifying
defenses
against
microbial
threats.
Highlighting
both
eukaryotic
prokaryotic
systems,
this
delves
into
biogenesis,
isolation,
functional
roles
EVs,
illustrating
their
importance
not
only
fundamental
biological
processes
but
also
potential
therapeutic
applications.
studies
illuminated
significant
facilitating
communication
pathogens,
highlighting
host-defense
mechanisms.
However,
despite
these
advancements,
challenges
remain
efficient
isolation
characterization
plant-derived
EVs.
Overcoming
is
fully
harnessing
developing
next-generation
proposes
innovative
strategies
utilizing
RNA-based
interventions
delivered
via
bolster
plant
resilience
diseases.
By
integrating
latest
scientific
findings
with
practical
applications
agriculture,
aims
enhance
connection
biology
development
management
technologies.
Current Opinion in Plant Biology,
Год журнала:
2024,
Номер
83, С. 102672 - 102672
Опубликована: Дек. 28, 2024
Extracellular
vesicles
(EVs)
are
membrane-delimited
nanoparticles
found
in
every
kingdom
of
life
and
known
to
mediate
cell-cell
communication
animal
systems
through
the
trafficking
proteins
nucleic
acids.
Research
into
plant
microbial
EVs
suggests
that
these
have
similar
transport
capacity,
moreover
able
signalling
not
only
within
an
organism
but
also
between
organisms,
acting
plants
their
partners
cross-kingdom
signalling.
Here,
we
review
recent
research
exploring
roles
EVs,
both
microbial,
highlighting
emerging
trends
functional
conservation
species
across
kingdoms,
complemented
by
heterogeneity
EV
subpopulations
at
level
places
as
powerful
regulatory
mechanisms
biotic
interactions.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2023,
Номер
unknown
Опубликована: Дек. 19, 2023
Abstract
Bidirectional
communication
between
pathogenic
microbes
and
their
plant
hosts
via
small
(s)RNA-mediated
cross-kingdom
RNA
interference
(ckRNAi)
is
one
key
element
for
successful
host
colonisation.
However,
whether
mutualistic
fungi
from
the
Serendipitaceae
family,
known
extremely
broad
range,
employ
sRNAs
to
colonize
roots
still
under
discussion.
To
address
this
question,
we
developed
a
pipeline
validate
accumulation,
translocation,
activity
of
fungal
in
post-transcriptional
silencing
Arabidopsis
thaliana
genes.
Using
stem-loop
PCR,
detected
expression
specific
set
Serendipita
indica
(
Si)
sRNAs,
targeting
genes
involved
cell
wall
organization,
hormonal
signalling
regulation,
immunity,
gene
regulation.
confirm
these
sRNA
cells,
Si
were
transiently
expressed
protoplasts.
Stem-loop
PCR
proved
while
qPCR
validated
predicted
target
Furthermore,
ARGONAUTE
1
immunoprecipitation
At
AGO1-IP)
revealed
loading
into
RNAi
machinery,
suggesting
translocation
fungus
root
cells.
In
conclusion,
study
provides
blueprint
rapid
selection
analysis
effectors
plant-microbe
interactions
further
suggests
Sebacinoid
symbiosis.
Highlight
Small
RNAs
beneficial
are
translocated
silence
at
onset
interaction,
revealing
sebacinoid