Diseases
pose
a
significant
and
pressing
concern
for
the
sustainable
development
of
aquaculture
sector,
particularly
as
their
impact
continues
to
grow
due
climatic
shifts
such
rising
water
temperatures.
While
various
approaches,
ranging
from
biosecurity
measures
vaccines,
have
been
devised
combat
infectious
diseases,
efficacy
is
disease-
species-specific
contingent
upon
multitude
factors.
The
field
genetics
genomics
offer
effective
tools
control
prevent
disease
outbreaks
in
aquatic
animal
species.
In
this
study,
we
present
key
findings
our
recent
research,
focusing
on
genetic
resistance
three
specific
diseases:
White
Spot
Syndrome
Virus
WSSV)
white
shrimp,
Bacterial
Necrotic
Pancreatitis
(BNP)
striped
catfish
skin
fluke
(a
parasitic
ailment)
yellowtail
kingfish.
Our
investigations
reveal
that
all
species
possess
substantial
heritable
components
resistant
traits,
indicating
potential
responsiveness
artificial
selection
improvement
programs
tailored
these
diseases.
Also,
observed
high
association
between
traits
survival
rates.
Through
selective
breeding
aimed
at
enhancing
pathogens,
achieved
gains,
averaging
10%
per
generation.
These
also
contributed
positively
overall
production
performance
productivity
Although
effects
immunological
or
immune
responses
were
not
they
yielded
favourable
results
catfish.
Furthermore,
genomic
analyses,
including
shallow
genome
sequencing
pedigreed
populations,
enriched
understanding
architecture
underlying
traits.
are
primarily
governed
by
polygenic
nature,
with
numerous
genes
variants,
each
small
effects.
Leveraging
range
advanced
statistical
methods,
mixed
models
machine
deep
learning,
developed
prediction
demonstrated
moderate
levels
accuracy
forecasting
disease-related
addition
genomics,
RNA-seq
experiments
identified
several
undergo
upregulation
response
infection
viral
loads
within
populations.
Preliminary
microbiome
data,
while
offering
limited
predictive
one
studied
species,
underscore
combining
data
sequence
information
enhance
power
Lastly,
paper
briefly
discusses
roles
precision
agriculture
systems,
AI
algorithms,
outlines
path
future
research
expedite
disease-resistant
lines
target
conclusion,
study
underscores
critical
role
fortifying
sector
against
threats
posed
paving
way
more
resilient
development.
Abstract
Sea
cucumber
is
a
morphologically
diverse
and
ecologically
important
clade
of
echinoderms.
The
sea
Apostichopus
japonicus
the
most
economically
valuable
species
cucumber.
initial
assembly
A.
genome
was
released
in
2017.
However,
this
fragmented
lacks
relative
position
information
genes
on
chromosomes.
In
study,
we
produced
high-quality
chromosome-level
using
Pacbio
HiFi
long-reads
Hi-C
sequencing
data.
assembled
spanned
671.60
Mb
with
contig
N50
size
17.20
scaffold
29.65
Mb.
A
total
99.9%
anchored
to
23
total,
19,828
were
annotated,
97.2%
BUSCO
fully
represented.
This
will
not
only
aid
development
sustainable
aquaculture
practices,
but
also
lay
foundation
for
deeper
understanding
their
genetic
makeup,
evolutionary
history,
ecological
adaptation.
Biology,
Год журнала:
2024,
Номер
13(1), С. 29 - 29
Опубликована: Янв. 4, 2024
Diseases
pose
a
significant
and
pressing
concern
for
the
sustainable
development
of
aquaculture
sector,
particularly
as
their
impact
continues
to
grow
due
climatic
shifts
such
rising
water
temperatures.
While
various
approaches,
ranging
from
biosecurity
measures
vaccines,
have
been
devised
combat
infectious
diseases,
efficacy
is
disease
species
specific
contingent
upon
multitude
factors.
The
fields
genetics
genomics
offer
effective
tools
control
prevent
outbreaks
in
aquatic
animal
species.
In
this
study,
we
present
key
findings
our
recent
research,
focusing
on
genetic
resistance
three
diseases:
White
Spot
Syndrome
Virus
(WSSV)
white
shrimp,
Bacterial
Necrotic
Pancreatitis
(BNP)
striped
catfish,
skin
fluke
(a
parasitic
ailment)
yellowtail
kingfish.
Our
investigations
reveal
that
all
possess
substantial
heritable
components
disease-resistant
traits,
indicating
potential
responsiveness
artificial
selection
improvement
programs
tailored
these
diseases.
Also,
observed
high
association
between
traits
survival
rates.
Through
selective
breeding
aimed
at
enhancing
pathogens,
achieved
gains,
averaging
10%
per
generation.
These
also
contributed
positively
overall
production
performance
productivity
Although
effects
immunological
or
immune
responses
were
not
they
yielded
favorable
results
catfish.
Furthermore,
genomic
analyses,
including
shallow
genome
sequencing
pedigreed
populations,
enriched
understanding
architecture
underlying
traits.
are
primarily
governed
by
polygenic
nature,
with
numerous
genes
variants,
each
small
effects.
Leveraging
range
advanced
statistical
methods,
mixed
models
machine
deep
learning,
developed
prediction
demonstrated
moderate-to-high
levels
accuracy
forecasting
disease-related
addition
genomics,
RNA-seq
experiments
identified
several
undergo
upregulation
response
infection
viral
loads
within
populations.
Preliminary
microbiome
data,
while
offering
limited
predictive
one
studied
species,
underscore
combining
data
sequence
information
enhance
power
Lastly,
paper
briefly
discusses
roles
precision
agriculture
systems
AI
algorithms
outlines
path
future
research
expedite
lines
target
conclusion,
study
underscores
critical
role
fortifying
sector
against
threats
posed
paving
way
more
resilient
development.
Reviews in Aquaculture,
Год журнала:
2024,
Номер
16(4), С. 1819 - 1839
Опубликована: Май 23, 2024
Abstract
Crustacean
aquaculture,
especially
monosex
culture,
requires
a
comprehensive
knowledge
of
the
mechanisms
regulating
sex
determination
and
differentiation.
Decapod
crustaceans
display
either
female
heterogamety
(ZW/ZZ)
or
male
(XY/XX)
as
their
mode
genotypic
determination.
However,
some
decapod
species
exhibit
sexual
plasticity
via
removing
androgenic
gland,
knockdown
insulin
receptor
transcripts,
administrating
exogenous
steroids,
altering
environmental
factors.
Although
master
sex‐determining
gene
in
decapods
remains
elusive,
various
genes,
hormones,
neurotransmitter
are
emerging
important
factors
This
review
looks
into
recent
advancements
studies
related
to
genetic
system
that
trigger
reversal.
Moreover,
elucidation
role
differentiation
both
females
males,
well
underlying
interrelated
regulatory
mechanisms,
provides
justification
for
three
levels
application:
induction
populations,
detection
precocious
genotype,
prevention
uncontrolled
reproduction.
Finally,
we
proposed
future
directions
bioinformatics
analysis
genome
editing
coupled
with
control
increase
yield
economic
decapods.
In
conclusion,
this
foundation
research
on
reproductive
biology
regulation
decapods,
aim
aiding
practitioners
advancing
crustacean
aquaculture
industry.
The Innovation Life,
Год журнала:
2025,
Номер
unknown, С. 100116 - 100116
Опубликована: Янв. 1, 2025
<p>Crustacea
is
a
species-rich
subphylum
of
Arthropoda
that
contains
mostly
aquatic
species.
Here,
we
established
comprehensive
genomic
database
dedicated
to
the
Crustacea.
CRUSTADB
represents
significant
advancement
in
crustacean
genomics,
integrating
an
extensive
array
resources.
The
encompasses
33
latest
genomes,
providing
foundational
resource
for
genetic
and
studies
within
this
clade.
Additionally,
it
includes
impressive
789
Gb
resequencing
data
across
10
species
order
Decapoda,
297
transcriptomes
from
28
diverse
species,
312
mitochondrial
offering
broad
spectrum
information.
not
merely
repository
data;
also
offers
suite
user-friendly
tools
designed
multifaceted
integrative
comparative
analyses.
These
enable
users
visually
browse
genomes
access
wide
range
detailed
information,
including
genome
assembly
statistics,
variations,
gene
annotations,
expression
profiles,
family
dynamics,
data.
Thus,
will
facilitate
understanding
serving
as
invaluable
researchers
field.
can
be
accessed
at
<ext-link
ext-link-type="uri"
xmlns:xlink="http://www.w3.org/1999/xlink"
xlink:href="http://crustacean_ysfri.qnlm.ac/#/home">http://crustacean_ysfri.qnlm.ac/#/home</ext-link>.</p>
Genes,
Год журнала:
2025,
Номер
16(2), С. 174 - 174
Опубликована: Янв. 31, 2025
Background/Objectives:Procambarus
clarkii
is
an
important
freshwater
aquaculture
species
in
China
which
has
the
characteristics
of
rich
nutrition
and
delicious
taste.
However,
expansion
scale,
germplasm
degradation,
other
problems
that
have
become
increasingly
prominent
seriously
restrict
sustainable
development
crayfish
industry.
Genetic
improvement
urgent
need
for
industry,
selective
breeding
way
to
improve
varieties.
Methods:
We
established
full-sibling
family
populations
red
swamp
performed
whole-genome
resequencing
F3
family-selected
population
wild
from
four
regions
Hunan
Province
(Nanx,
Mil,
Caish,
Wangc).
Results:
The
results
showed
there
was
a
clear
separation
between
population,
decline
rate
slightly
faster
than
population.
There
local
gene
flow
populations,
as
well
families.
In
addition,
52
SNP
loci
related
body
weight
traits
were
identified
by
genome-wide
association
analysis,
candidate
WIPF1
growth
screened
out.
Conclusions:
line
selection
obtained
more
stable
lines.
this
study
Wiskott-Aldrich
syndrome
protein-interacting
protein
member
1
(WIPF1)
first
time.
provide
theoretical
basis
exploring
mechanism
P.
carrying
out
in-depth
genetic
improvement.
Marine Life Science & Technology,
Год журнала:
2025,
Номер
7(1), С. 50 - 65
Опубликована: Фев. 15, 2025
Abstract
Growth
of
the
Pacific
white
shrimp
Litopenaeus
vannamei
,
most
important
farmed
crustacean,
has
consistently
been
a
focal
point
for
breeders.
Over
past
decades,
some
candidate
genes
growth
have
identified.
However,
further
research
is
needed
to
elucidate
molecular
regulatory
mechanism
these
genes.
LvMmd2
was
previously
identified
as
gene
that
may
inhibit
L.
.
In
this
study,
we
analyzed
genotype
and
expression
in
breeding
family
indicated
its
role
growth-inhibiting
gene.
We
found
co-localized
with
homolog
LvPAQR3
at
Golgi
apparatus.
Using
co-immunoprecipitation
(Co-IP)
DUAL
membrane
system
yeast
two-hybrid
(MbY2H),
interactions
between
LvPAQR3,
LvRaf1,
well
LvRho.
These
results
suggest
directly
indirectly
regulates
Ras
signaling
pathway.
Furthermore,
show
affect
PI3K/AKT,
insulin,
Hippo
pathways
regulate
cell
proliferation
differentiation
via
LvRaf1.
Through
transcriptome
MbY2H
analyses,
also
revealed
interaction
proteins
involved
growth,
immunity,
protein
transport,
synthesis,
modification.
findings
demonstrate
various
through
which
growth.
This
study
provides
insights
into
regulated
by
Mmd2
enhances
our
understanding
function,
highlights
potential
application
breeding.
Reviews in Aquaculture,
Год журнала:
2024,
Номер
unknown
Опубликована: Сен. 17, 2024
ABSTRACT
Biofloc
technology
(BFT),
initially
adapted
for
shrimp
farming
in
the
1970s,
represents
a
sophisticated
ecosystem
of
microorganisms
designed
to
enhance
aquaculture
productivity
and
sustainability.
Despite
its
established
history,
research
into
BFT
is
surprisingly
still
at
an
early
stage
globally.
This
review
conducted
bibliometric
analysis
612
articles
from
major
journals
spanning
2008–2023
systematically
explore
development,
trends,
focal
points
research.
The
revealed
that
bulk
significant
contributions
originates
Brazil
China,
highlighting
areas
interest
can
be
categorized
four
hotspots,
such
as
(1)
efficient
nitrogen
transformation,
(2)
biofloc
microbiology,
(3)
biofloc's
immunostimulant
properties,
(4)
evaluation
methodologies.
At
end,
microecology
concept
was
introduced,
cross‐discipline
methods
were
promoted
field.
Notably,
much
exploratory
phase,
with
numerous
functional
bacteria
unidentified
optimization
strategies
underdeveloped.
These
gaps
present
opportunities
enhancing
through
improvements
wastewater
management,
product
quality,
safety,
yield.
Furthermore,
notes
growing
trend
applying
microbiome
microecological
aquaculture,
high‐throughput
sequencing
data
increasingly
used
understand
microbial
interactions
transformation
within
bioflocs.
direction
promises
unlock
further
insights
complex
ecosystems
bioflocs
their
applications
sustainable
aquaculture.
