The Journal of Chemical Physics,
Год журнала:
2024,
Номер
160(9)
Опубликована: Март 6, 2024
The
formation
of
biomolecular
condensates
in
vivo
is
increasingly
recognized
to
underlie
a
multitude
crucial
cellular
functions.
Furthermore,
the
evolution
highly
dynamic
protein
into
progressively
less
reversible
assemblies
thought
be
involved
variety
disorders,
from
cancer
over
neurodegeneration
rare
genetic
disorders.
There
an
increasing
need
for
efficient
experimental
methods
characterize
thermodynamics
condensate
and
that
can
used
screening
campaigns
identify
rationally
design
modifying
compounds.
Theoretical
advances
field
are
also
identifying
key
parameters
measured
order
obtain
comprehensive
understanding
underlying
interactions
driving
forces.
Here,
we
review
recent
progress
development
quantitative
study
forces
behind
temporal
condensates.
International Journal of Molecular Sciences,
Год журнала:
2023,
Номер
24(7), С. 6313 - 6313
Опубликована: Март 28, 2023
Parkinson’s
disease
(PD)
is
the
second
most
common
neurodegenerative
around
world;
however,
its
pathogenesis
remains
unclear
so
far.
Recent
advances
have
shown
that
DNA
damage
and
repair
deficiency
play
an
important
role
in
pathophysiology
of
PD.
There
growing
evidence
suggesting
involved
propagation
cellular
PD,
leading
to
neuropathology
under
different
conditions.
Here,
we
reviewed
current
work
on
First,
outlined
causes
Second,
described
potential
pathways
by
which
mediates
neurotoxicity
PD
discussed
precise
mechanisms
drive
these
processes
damage.
In
addition,
looked
ahead
interventions
targeting
repair.
Finally,
based
status
research,
key
problems
need
be
addressed
future
research
were
proposed.
α-Synuclein
(α-Syn)
aggregation
into
fibrils
with
prion-like
features
is
intimately
associated
Lewy
pathology
and
various
synucleinopathies.
Emerging
studies
suggest
that
α-Syn
could
form
liquid
condensates
through
phase
separation.
The
role
of
these
in
disease
remains
elusive
the
interplay
between
unexplored,
possibly
due
to
difficulties
triggering
formation
cells.
To
address
this
gap,
we
developed
an
assay
allowing
controlled
assembly/disassembly
cells
studied
them
upon
exposure
preformed
fibrillar
polymorphs.
Fibrils
triggered
evolution
solid-like
structures
displaying
growing
needle-like
extensions
exhibiting
pathological
amyloid
hallmarks.
No
such
changes
were
elicited
on
did
not
undergo
We,
therefore,
propose
a
model
where
within
fuels
exogenous
seeds
growth,
thus
speeding
up
propagation
pathogenic
aggregates.
Prion
diseases
are
characterized
by
prion
protein
(PrP)
transmissible
aggregation
and
neurodegeneration,
which
has
been
linked
to
oxidative
stress.
The
physiological
function
of
PrP
seems
related
sequestering
redox-active
Cu
2+
,
dyshomeostasis
is
observed
in
disease
brain.
It
unclear
whether
contributes
aggregation,
recently
shown
be
mediated
condensation.
This
study
indicates
that
promotes
condensation
live
cells
at
the
cell
surface
vitro
through
copartitioning.
Molecularly,
inhibited
β-structure
hydrophobic
residues
exposure.
Oxidation,
induced
H
2
O
triggered
liquid-to-solid
transition
PrP:Cu
condensates
promoted
amyloid-like
aggregation.
In
cells,
overexpression
C
initially
protected
against
cytotoxicity
but
led
upon
extended
copper
Our
data
suggest
as
a
buffer
for
prevents
toxicity
can
into
prolonged
PLoS Computational Biology,
Год журнала:
2023,
Номер
19(5), С. e1010652 - e1010652
Опубликована: Май 15, 2023
Liquid
condensate
droplets
with
distinct
compositions
of
proteins
and
nucleic
acids
are
widespread
in
biological
cells.
While
it
is
known
that
such
droplets,
or
compartments,
can
regulate
irreversible
protein
aggregation,
their
effect
on
reversible
self-assembly
remains
largely
unexplored.
In
this
article,
we
use
kinetic
theory
solution
thermodynamics
to
investigate
the
liquid-liquid
phase
separation
structures
well-defined
sizes
architectures.
We
find
that,
when
assembling
subunits
preferentially
partition
into
liquid
robustness
against
traps
maximum
achievable
assembly
rates
be
significantly
increased.
particular,
both
range
conditions
leading
productive
corresponding
increase
by
orders
magnitude.
analyze
rate
equation
predictions
using
simple
scaling
estimates
identify
effects
as
a
function
relevant
control
parameters.
These
results
may
elucidate
processes
underlie
normal
cellular
functions
pathogenesis,
suggest
strategies
for
designing
efficient
bottom-up
nanomaterials
applications.
The Journal of Chemical Physics,
Год журнала:
2024,
Номер
160(9)
Опубликована: Март 6, 2024
The
formation
of
biomolecular
condensates
in
vivo
is
increasingly
recognized
to
underlie
a
multitude
crucial
cellular
functions.
Furthermore,
the
evolution
highly
dynamic
protein
into
progressively
less
reversible
assemblies
thought
be
involved
variety
disorders,
from
cancer
over
neurodegeneration
rare
genetic
disorders.
There
an
increasing
need
for
efficient
experimental
methods
characterize
thermodynamics
condensate
and
that
can
used
screening
campaigns
identify
rationally
design
modifying
compounds.
Theoretical
advances
field
are
also
identifying
key
parameters
measured
order
obtain
comprehensive
understanding
underlying
interactions
driving
forces.
Here,
we
review
recent
progress
development
quantitative
study
forces
behind
temporal
condensates.