Transcriptional programs of neoantigen-specific TIL in anti-PD-1-treated lung cancers DOI Creative Commons
Justina X. Caushi, Jiajia Zhang, Zhicheng Ji

и другие.

Nature, Год журнала: 2021, Номер 596(7870), С. 126 - 132

Опубликована: Июль 21, 2021

Abstract PD-1 blockade unleashes CD8 T cells 1 , including those specific for mutation-associated neoantigens (MANA), but factors in the tumour microenvironment can inhibit these cell responses. Single-cell transcriptomics have revealed global dysfunction programs tumour-infiltrating lymphocytes (TIL). However, majority of TIL do not recognize antigens 2 and little is known about transcriptional MANA-specific TIL. Here, we identify clones using MANA functional expansion assay 3 neoadjuvant anti-PD-1-treated non-small lung cancers (NSCLC). We use their receptors as a ‘barcode’ to track analyse coupled single-cell RNA sequencing receptor sequencing. find both MANA- virus-specific TIL, regardless response, MANA-, influenza- Epstein–Barr each unique programs. Despite exposure cognate antigen, express an incompletely activated cytolytic program. hallmark tissue-resident memory (TRM) cells, low levels interleukin-7 (IL-7R) are functionally less responsive (IL-7) compared with influenza-specific TRM cells. Compared from responding tumours, non-responding tumours markedly lower ligand-dependent signalling, largely confined HOBIT high subsets, coordinately upregulate checkpoints, killer inhibitory inhibitors activation. These findings provide important insights overcoming resistance blockade.

Язык: Английский

A molecular cell atlas of the human lung from single-cell RNA sequencing DOI Open Access
Kyle J. Travaglini, Ahmad N. Nabhan,

Lolita Penland

и другие.

Nature, Год журнала: 2020, Номер 587(7835), С. 619 - 625

Опубликована: Ноя. 18, 2020

Язык: Английский

Процитировано

1366

Intratumoral Tcf1+PD-1+CD8+ T Cells with Stem-like Properties Promote Tumor Control in Response to Vaccination and Checkpoint Blockade Immunotherapy DOI Creative Commons
Imran Siddiqui,

Karin Schaeuble,

Vijaykumar Chennupati

и другие.

Immunity, Год журнала: 2019, Номер 50(1), С. 195 - 211.e10

Опубликована: Янв. 1, 2019

Язык: Английский

Процитировано

1262

Human T Cell Development, Localization, and Function throughout Life DOI Creative Commons

Brahma V. Kumar,

Thomas J. Connors, Donna L. Färber

и другие.

Immunity, Год журнала: 2018, Номер 48(2), С. 202 - 213

Опубликована: Фев. 1, 2018

Язык: Английский

Процитировано

1030

Human Tissue-Resident Memory T Cells Are Defined by Core Transcriptional and Functional Signatures in Lymphoid and Mucosal Sites DOI Creative Commons

Brahma V. Kumar,

Wenji Ma, Michelle Miron

и другие.

Cell Reports, Год журнала: 2017, Номер 20(12), С. 2921 - 2934

Опубликована: Сен. 1, 2017

Язык: Английский

Процитировано

913

Guidelines for the use of flow cytometry and cell sorting in immunological studies (second edition) DOI Open Access
Andrea Cossarizza, Hyun‐Dong Chang, Andreas Radbruch

и другие.

European Journal of Immunology, Год журнала: 2019, Номер 49(10), С. 1457 - 1973

Опубликована: Окт. 1, 2019

These guidelines are a consensus work of considerable number members the immunology and flow cytometry community. They provide theory key practical aspects enabling immunologists to avoid common errors that often undermine immunological data. Notably, there comprehensive sections all major immune cell types with helpful Tables detailing phenotypes in murine human cells. The latest techniques applications also described, featuring examples data can be generated and, importantly, how analysed. Furthermore, tips, tricks pitfalls avoid, written peer-reviewed by leading experts field, making this an essential research companion.

Язык: Английский

Процитировано

881

Co-expression of CD39 and CD103 identifies tumor-reactive CD8 T cells in human solid tumors DOI Creative Commons
Thomas Duhen, Rebekka Duhen,

Ryan Montler

и другие.

Nature Communications, Год журнала: 2018, Номер 9(1)

Опубликована: Июль 9, 2018

Abstract Identifying tumor antigen-specific T cells from cancer patients has important implications for immunotherapy diagnostics and therapeutics. Here, we show that CD103 + CD39 tumor-infiltrating CD8 (CD8 TIL) are enriched tumor-reactive both in primary metastatic tumors. This TIL subset is found across six different malignancies displays an exhausted tissue-resident memory phenotype. TILs have a distinct T-cell receptor (TCR) repertoire, with clones expanded the but present at low frequencies periphery. also efficiently kill autologous MHC-class I-dependent manner. Finally, higher of head neck associated better overall survival. Our data thus describe approach detecting will help define mechanisms existing treatments, may lead to future adoptive therapies.

Язык: Английский

Процитировано

761

CAR T Cells for Solid Tumors: New Strategies for Finding, Infiltrating, and Surviving in the Tumor Microenvironment DOI Creative Commons
Marina C. Martinez, Edmund K. Moon

Frontiers in Immunology, Год журнала: 2019, Номер 10

Опубликована: Фев. 4, 2019

Chimeric antigen receptor (CAR) T cells, cells that have been genetically engineered to express a recognizes specific antigen, given rise breakthroughs in treating hematological malignancies. However, their success solid tumors has limited. The unique challenges posed CAR cell therapy by can be described three steps: finding, entering, and surviving the tumor. use of dual designs recognize multiple antigens at once local administration are both strategies used overcome hurdle localization Additionally, immunosuppressive tumor microenvironment implications for function terms differentiation exhaustion, combining CARs with checkpoint blockade or depletion other suppressive factors shown very promising results mitigate phenomenon exhaustion. Finally, identifying overcoming mechanisms associated dysfunction is vital importance generating proliferate successfully eliminate cells. structure costimulatory domains chosen may play an important role overall TME, "armored" secrete cytokines third- fourth-generation offer ways enhance function.

Язык: Английский

Процитировано

740

Single-Cell Analysis of Crohn’s Disease Lesions Identifies a Pathogenic Cellular Module Associated with Resistance to Anti-TNF Therapy DOI Creative Commons
Jérôme C. Martin, Christie Chang, Gilles Boschetti

и другие.

Cell, Год журнала: 2019, Номер 178(6), С. 1493 - 1508.e20

Опубликована: Авг. 29, 2019

Язык: Английский

Процитировано

711

CD8+ T cell differentiation and dysfunction in cancer DOI
Mary Philip, Andrea Schietinger

Nature reviews. Immunology, Год журнала: 2021, Номер 22(4), С. 209 - 223

Опубликована: Июль 12, 2021

Язык: Английский

Процитировано

695

The immune cell landscape in kidneys of patients with lupus nephritis DOI

Arnon Arazi,

Deepak A. Rao, Céline C. Berthier

и другие.

Nature Immunology, Год журнала: 2019, Номер 20(7), С. 902 - 914

Опубликована: Июнь 17, 2019

Язык: Английский

Процитировано

645