Evolutionary
change
within
community
members
and
shifts
in
species
composition
via
sorting
contribute
to
trait
dynamics.
However,
we
do
not
understand
when
how
both
processes
Here,
estimated
the
contributions
of
evolution
over
time
(60
days)
bacterial
communities
24
under
selection
by
a
ciliate
predator.
We
found
that
contributed
increased
carrying
capacity,
while
decreased
anti-predator
defences.
The
relative
roles
changed
time,
our
analysis
indicates
if
initial
variation
was
direction
selection,
prevailed,
otherwise
drove
phenotypic
change.
Furthermore,
composition,
population
densities
genomic
were
affected
match-mismatch
combinations
predator
prey
evolutionary
history.
Overall,
findings
help
integrate
ecological
structure
communities.
Annual Review of Entomology,
Год журнала:
2022,
Номер
68(1), С. 363 - 380
Опубликована: Окт. 7, 2022
There
is
growing
awareness
of
pollinator
declines
worldwide.
Conservation
efforts
have
mainly
focused
on
finding
the
direct
causes,
while
paying
less
attention
to
building
a
systemic
understanding
fragility
these
communities
pollinators.
To
fill
this
gap,
we
need
operational
measures
network
resilience
that
integrate
two
different
approaches
in
theoretical
ecology.
First,
should
consider
range
conditions
compatible
with
stable
coexistence
all
species
community.
Second,
address
rate
and
shape
collapse
once
safe
space
exited.
In
review,
describe
integrative
approach
several
mechanisms
may
enhance
communities,
chiefly
rewiring
interactions,
increasing
heterogeneity,
allowing
variance,
enhancing
coevolution.
The
most
pressing
develop
ways
reduce
gap
between
recommendations
practical
applications.
This
perspective
shifts
emphasis
from
traditional
focusing
equilibrium
states
strategies
allow
pollination
networks
cope
global
environmental
change.
Ecology Letters,
Год журнала:
2022,
Номер
25(10), С. 2091 - 2106
Опубликована: Авг. 12, 2022
Community
ecology
typically
assumes
that
competitive
exclusion
and
species
coexistence
are
unaffected
by
evolution
on
the
time
scale
of
ecological
dynamics.
However,
recent
studies
suggest
rapid
operating
concurrently
with
competition
may
enable
coexistence.
Such
findings
necessitate
general
theory
incorporates
contributions
eco-evolutionary
processes
in
parallel
purely
mechanisms
provides
metrics
for
quantifying
role
shaping
outcomes
both
modelling
empirical
contexts.
To
foster
development
such
theory,
here
we
extend
interpretation
two
principal
modern
theory-niche
ability
differences-to
systems
where
competitors
evolve.
We
define
versions
these
considering
how
invading
resident
adapt
to
conspecific
heterospecific
competitors.
show
niche
differences
sums
evolutionary
processes,
they
accurately
predict
potential
stable
previous
theoretical
Finally,
this
frames
assessments
effects
coexistence,
work
dynamics
can
be
further
integrated.
Philosophical Transactions of the Royal Society B Biological Sciences,
Год журнала:
2022,
Номер
377(1855)
Опубликована: Май 30, 2022
Recent
studies
have
revealed
the
importance
of
feedbacks
between
contemporary
rapid
evolution
(i.e.
that
occurs
through
changes
in
allele
frequencies)
and
ecological
dynamics.
Despite
its
inherent
interdisciplinary
nature,
however,
on
eco-evolutionary
been
mostly
tended
to
focus
adaptation
at
phenotypic
level
without
considering
genetic
architecture
evolutionary
processes.
In
empirical
studies,
researchers
often
compared
dynamics
when
focal
species
under
selection
has
a
single
genotype
with
it
multiple
genotypes.
theoretical
common
approaches
are
models
quantitative
traits
where
mean
trait
values
change
adaptively
along
fitness
gradient
Mendelian
two
alleles
locus.
On
other
hand,
is
well
known
can
affect
short-term
population
genetics.
Indeed,
recent
demonstrated
(e.g.
number
loci,
linkage
disequilibrium
ploidy)
matters
rescue
prevents
extinction
cycles
driven
by
(co)evolution).
I
propose
will
promote
synthesis
functional
genomics
combine
genetics
ecology
as
nonlinear
time-series
analyses
using
emerging
big
data.
This
article
part
theme
issue
‘Genetic
basis
speciation:
from
loci
causative
mutations’.
Rapid
environmental
changes
result
in
massive
biodiversity
loss,
with
detrimental
consequences
for
the
functioning
of
ecosystems.
Recent
studies
suggest
that
intraspecific
diversity
can
contribute
to
ecosystem
an
extent
comparable
contributions
interspecific
diversity.
Knowledge
on
relative
importance
these
two
sources
is
essential
predicting
loss
and
will
aid
prioritization
conservation
targets
implementation
management
measures.
However,
our
quantitative
insights
into
how
affects
effects
be
compared
are
still
very
limited.
To
facilitate
such
insights,
we
extend
Price
partitioning
method
originally
introduced
by
J.
Fox
2006,
previously
used
quantify
species
gain
functioning,
also
account
function.
Using
this
extended
version
yield
information
required
answering
research
questions
addressing
correlations
between
identifying
groups
large
effects,
assessing
whether
compensate
losses
Applying
carefully
designed
experiments
provide
additional
at
different
ecological
levels
contributes
functioning.
Summary
The
plant
microbiota
research
field
has
rapidly
shifted
from
efforts
aimed
at
gaining
a
descriptive
understanding
of
composition
to
focus
on
acquiring
mechanistic
insights
into
functions
and
assembly
rules.
This
evolution
was
driven
by
our
ability
establish
comprehensive
collections
plant‐associated
microbes
reconstruct
meaningful
microbial
synthetic
communities
(SynComs).
We
argue
that
this
powerful
deconstruction–reconstruction
strategy
can
be
used
reconstitute
increasingly
complex
ecosystems
(SynEcos)
mechanistically
understand
high‐level
biological
organization.
transitioning
simple
more
advanced,
fully
tractable
programmable
gnotobiotic
SynEcos
is
ongoing
aims
rationally
simplifying
natural
engineering
them.
Such
reconstitution
ecology
approaches
represent
an
untapped
for
bridging
the
gap
between
functional
biology
unraveling
plant–microbiota–environment
mechanisms
modulate
ecosystem
health,
assembly,
functioning.
Environmental Sciences Europe,
Год журнала:
2023,
Номер
35(1)
Опубликована: Апрель 20, 2023
Abstract
Background
New
genomic
techniques
(NGTs)
allow
new
genotypes
and
traits
to
be
developed
in
different
ways
with
outcomes
compared
previous
genetic
engineering
methods
or
conventional
breeding
(including
non-targeted
mutagenesis).
EU
GMO
regulation
requires
an
assessment
of
their
direct
indirect
effects
that
may
immediate,
delayed
cumulative.
Such
also
result
from
the
interactions
NGT
organisms
simultaneously
present
a
shared
receiving
environment
emerge
combination
traits.
This
review
elaborates
such
potential
based
on
literature
reasoned
scenarios
identify
possible
pathways
harm.
Main
findings
might
introduced
into
food
chains
large-scale,
involving
many
traits,
across
broad
range
species
within
short
periods
time.
Unavoidably,
this
would
increase
likelihood
will
occur
through
between
are,
for
example
environment.
It
has
assumed
cumulative
these
exceed
sum
risks
identified
distinct
‘events’.
Consequently,
risk
assessors
managers
not
only
need
consider
associated
individual
(‘events’),
but
should
take
account
resulting
combinatorial
effects.
In
addition,
prospective
technology
could
help
manager
defining
criteria
minimize
unintended
limiting
scale
releases.
Conclusions
If
genetically
engineered
(GE)
derived
NGTs
are
released
environment,
potentially
negative
impacts
minimized.
As
all
GE
organisms,
it
is,
therefore,
crucial
assess
events,
which
can
trigger
adverse
impacts.
is
necessary
develop
hypotheses
specific
explore
harm
perspective
precautionary
principle.
introduction
provide
instrument
control
releases
organisms.
Molecular Ecology,
Год журнала:
2023,
Номер
32(16), С. 4467 - 4481
Опубликована: Июнь 9, 2023
Abstract
The
intra‐
and
interspecific
facets
of
biodiversity
have
traditionally
been
analysed
separately,
limiting
our
understanding
how
evolution
has
shaped
biodiversity,
(as
a
whole)
alters
ecological
dynamics
hence
eco‐evolutionary
feedbacks
at
the
community
scale.
Here,
we
propose
using
candidate
genes
phylogenetically‐conserved
across
species
sustaining
functional
traits
as
an
inclusive
unit
transcending
boundaries.
This
framework
merges
knowledge
from
genomics
ecology,
first
provide
guidelines
concrete
example
for
identifying
(PCCGs)
within
communities
measuring
PCCGs.
We
then
explain
measured
PCCGs
can
be
linked
to
ecosystem
functions,
which
unifies
recent
observations
that
both
are
important
functions.
highlight
processes
shaping
PCCG
diversity
patterns
argue
their
respective
role
inferred
concepts
derived
population
genetics.
Finally,
may
shift
field
focal‐species
approach
more
realistic
focal‐community
approach.
provides
novel
perspective
investigate
global
consequences
loss
biological
scales,
these
changes
further
alter
evolution.
Science,
Год журнала:
2024,
Номер
383(6688), С. 1240 - 1244
Опубликована: Март 14, 2024
When
ecological
and
evolutionary
dynamics
occur
on
comparable
timescales,
persistence
of
the
ensuing
eco-evolutionary
requires
both
stability.
This
unites
key
questions
in
ecology
evolution:
How
do
species
coexist,
what
maintains
genetic
variation
a
population?
In
this
work,
we
investigated
host-parasitoid
system
which
pea
aphid
hosts
rapidly
evolve
resistance
to
Current Opinion in Plant Biology,
Год журнала:
2024,
Номер
80, С. 102547 - 102547
Опубликована: Май 14, 2024
Plants
interact
with
each
other
via
a
multitude
of
processes
among
which
belowground
communication
facilitated
by
specialized
metabolites
plays
an
important
but
overlooked
role.
Until
now,
the
exact
targets,
modes
action,
and
resulting
phenotypes
that
these
induce
in
neighboring
plants
have
remained
largely
unknown.
Moreover,
positive
interactions
driven
release
root
exudates
are
prevalent
both
natural
field
conditions
controlled
laboratory
environments.
In
particular,
intraspecific
suggest
genotypic
recognition
mechanism
addition
to
non-self
perception
plant
roots.
This
review
concentrates
on
recent
discoveries
regarding
how
one
another
through
signals
intra-
interspecific
mixtures.
Furthermore,
we
elaborate
enhanced
understanding
can
propel
agroecology
forward.
Nature Communications,
Год журнала:
2023,
Номер
14(1)
Опубликована: Июнь 8, 2023
In
plant
communities,
diversity
often
increases
productivity
and
functioning,
but
the
specific
underlying
drivers
are
difficult
to
identify.
Most
ecological
theories
attribute
positive
effects
complementary
niches
occupied
by
different
species
or
genotypes.
However,
nature
of
niche
complementarity
remains
unclear,
including
how
it
is
expressed
in
terms
trait
differences
between
plants.
Here,
we
use
a
gene-centred
approach
study
mixtures
natural
Arabidopsis
thaliana
Using
two
orthogonal
genetic
mapping
approaches,
find
that
between-plant
allelic
at
AtSUC8
locus
strongly
associated
with
mixture
overyielding.
encodes
proton-sucrose
symporter
root
tissues.
Genetic
variation
affects
biochemical
activities
protein
variants
this
sensitivities
growth
changes
substrate
pH.
We
thus
speculate
-
particular
case
studied
here
evolutionary
divergence
along
an
edaphic
gradient
resulted
genotypes
now
drives
overyielding
mixtures.
Identifying
genes
important
for
ecosystem
functioning
may
ultimately
allow
linking
processes
drivers,
help
identify
traits
effects,
facilitate
development
high-performance
crop
variety