Complete Genomes of DNA Viruses in Fecal Samples from Small Terrestrial Mammals in Spain DOI Creative Commons
Jaime Buigues, Adrià Viñals,

Raquel Martínez-Recio

и другие.

Viruses, Год журнала: 2024, Номер 16(12), С. 1885 - 1885

Опубликована: Дек. 5, 2024

Viromics studies are allowing us to understand not only the enormous diversity of virosphere, but also potential threat posed by emerging viruses. Regarding latter, main concern lies in monitoring presence RNA viruses, zoonotic some DNA on which we have focused present study, should be highlighted. For this purpose, analyzed 160 fecal samples from 14 species small terrestrial mammals, 9 them belonging order Rodentia. This allowed identify a total 25 complete or near-complete genomes families Papillomaviridae, Polyomaviridae, Adenoviridae, Circoviridae, and Genomoviridae, 18 could considered new types. Our results provide significant increase number viruses European origin with databases, at under-represented compared In addition, characterization whole is relevance for further study evolutionary forces governing virus adaptation, such as recombination, may play an important role cross-species transmission.

Язык: Английский

Pathogens and planetary change DOI Creative Commons
Colin J. Carlson, Cole B. Brookson, Daniel J. Becker

и другие.

Опубликована: Янв. 15, 2025

Emerging infectious diseases, biodiversity loss, and anthropogenic environmental change are interconnected crises with massive social ecological costs. In this Review, we discuss how pathogens parasites responding to global change, the implications for pandemic prevention conservation. Ecological evolutionary principles help explain why both pandemics wildlife die-offs becoming more common; land-use loss often followed by an increase in zoonotic vector-borne diseases; some species, such as bats, host so many emerging pathogens. To prevent next pandemic, scientists should focus on monitoring limiting spread of a handful high-risk viruses, especially at key interfaces farms live-animal markets. But address much broader set disease risks associated Anthropocene, decision-makers will need develop comprehensive strategies that include pathogen surveillance across species ecosystems; conservation-based interventions reduce human–animal contact protect health; health system strengthening; improvements epidemic preparedness response. Scientists can contribute these efforts filling gaps data, expanding evidence base disease–driver relationships interventions. This Review explores relationship between diseases connected changes Anthropocene.

Язык: Английский

Процитировано

5

Air sampling accurately captures circulating zoonotic viral diversity emerging from poultry live-animal markets DOI Creative Commons

P. Cronin,

Jurre Y. Siegers,

Vireak Heang

и другие.

Research Square (Research Square), Год журнала: 2025, Номер unknown

Опубликована: Фев. 13, 2025

Environmental surveillance has emerged as a pivotal strategy for early detection of pathogens that pose threats to humans (1) but not been utilized zoonotic agents. In Asia, live-bird markets (LBMs) are key human-animal interfaces virus transmission (2). Traditional sampling strategies time-consuming, expensive, threaten animal welfare and have significant occupational biosafety risks. this study, we assessed the performance metagenomics on environmental samples (ES) compared traditional poultry swabs detecting avian viral in LBMs Cambodia. ES, including air, cage swabs, carcass wash water, were collected alongside throat cloacal from domestic chickens ducks across twelve visits two over 15-month period. Viral nucleic acids extracted sequenced using capture probe-based approach. Our results show ES outperformed highly pathogenic Influenza A/H5N1, circulating clades 2.3.4.4b 2.3.2.1c, which found environment missed by multiple occasions. was also sensitive 40 other viruses pathogen families such Astroviridae , Coronaviridae Picornaviridae Retroviridae . contigs showed high similarity those further highlighting accuracy findings highlight can precisely effectively replicate metagenomic samples, offering broader coverage enhanced pathogens. This robust approach could be mitigating spillover, controlling at LBMs, enhancing pandemic preparedness strategies.

Язык: Английский

Процитировано

0

Ingrained: Rice farming and the risk of zoonotic spillover, examples from Cambodia DOI Creative Commons
Benjamín L. Sievers, Sudipta Hyder, Filip Claes

и другие.

One Health, Год журнала: 2024, Номер 18, С. 100696 - 100696

Опубликована: Фев. 29, 2024

Rice cultivation in Southeast Asia is a One Health interface intersecting human, animal, and environmental health. This complexity creates potential for zoonotic transmission between diverse reservoirs. Bats harbor viruses like Nipah; mosquitoes transmit arboviruses; rodents spread hantaviruses. Domestic animals— including pigs with influenza dogs rabies aquatic animals can also pathogens. Climate change urbanization may further disrupt rice agro-ecologies. paper explores animal viral reservoirs, vectors, historical practices associated risk farming. land use changes could enhance spillover. Solutions are proposed, surveillance of animals, water, air to detect threats before major outbreaks, such as improved biosecurity, hygiene, livestock vaccinations. Ecological agricultural interventions together reduce from

Язык: Английский

Процитировано

3

Unveiling Disease X: Strategies for Tackling the New Frontier of Infectious Diseases DOI Creative Commons

Y Y Fei,

Jing Huang

Zoonoses, Год журнала: 2024, Номер 4(1)

Опубликована: Янв. 1, 2024

Disease X stands as a symbol for subset of emerging infectious diseases rising to prominence significant challenge global health security. This comprehensive review delves into the historical context, precise definition, and illustrative case studies disease X, including notable examples, such COVID-19, SARS, Ebola. The discussion then transitions an examination potential origins with particular focus on zoonotic pathways influence environmental factors. concludes suite proposed strategies aimed at prevention containment emphasizing critical role vigilant surveillance, swift response mechanisms, necessity fostering international cooperation.

Язык: Английский

Процитировано

3

The Evolution and Epidemiology of H3N2 Canine Influenza Virus After 20 Years in Dogs DOI
Brian R. Wasik, Lambodhar Damodaran,

Maria A. Maltepes

и другие.

bioRxiv (Cold Spring Harbor Laboratory), Год журнала: 2024, Номер unknown

Опубликована: Июль 19, 2024

ABSTRACT The H3N2 canine influenza virus (CIV) emerged from an avian reservoir in Asia around 2004. As the has now been circulating entirely among dogs for 20 years, we here update our understanding of evolution its new host. a host-switched virus, CIV will also reveal any host-adaptive changes arising during thousands infections within host, and analysis showed that evolved at constant rate. was first introduced into North America 2015 Korea, specifically examined epidemiology since then, including local outbreaks, regional die-outs, repeated reintroduction Asia. appears endemic only China after dying out South Korea 2017. Virus lineages appear to have seeded most recent US outbreaks – with 2 or 3 introductions past years. Combining clinical reports, diagnostic testing data, viral genomes show spreads rapidly kennels shelters different regions likely locally all those animals become infected immune. overall epidemic therefore requires longer-distance dispersal initiate locations. Patterns spread USA may select viruses adapted dense populations, which lack properties required efficient long-distance transfers other dog populations would keep prolonged circulation. IMPORTANCE Viruses occasionally jump hosts cause epidemics widely due movement humans animals, their viruses, profound consequences global health. emergence companion provides model disease dynamics evolution. arose provide many opportunities human exposure. transmission is dominated by fast-moving animal kennels, while sustaining more distant populations. Viral Americahas sustained few years time dies out. epidemiological evolutionary this structured host population shows how acute respiratory pathogen can emerge population.

Язык: Английский

Процитировано

0

Complete genomes of DNA viruses in faecal samples from small terrestrial mammals in Spain DOI Creative Commons
Jaime Buigues, Adrià Viñals,

Raquel Martínez-Recio

и другие.

bioRxiv (Cold Spring Harbor Laboratory), Год журнала: 2024, Номер unknown

Опубликована: Ноя. 12, 2024

Abstract Viromics studies are allowing us to understand not only the enormous diversity of virosphere, but also potential threat posed by emerging viruses. Regarding latter, main concern lies in monitoring presence RNA viruses, zoonotic some DNA on which we have focused present study, should be highlighted. For this purpose, analysed 160 faecal samples from 14 species belonging three orders small terrestrial mammals (i.e. Rodentia, Lagomorpha and Eulypotyphla ). This allowed identify a total 25 complete or near-complete genomes families Papillomaviridae, Polyomaviridae, Adenoviridae, Circoviridae Genomoviridae , 18 could considered new types. Our results provide significant increase number viruses European origin with databases, at clearly under-represented compared

Язык: Английский

Процитировано

0

Complete Genomes of DNA Viruses in Fecal Samples from Small Terrestrial Mammals in Spain DOI Creative Commons
Jaime Buigues, Adrià Viñals,

Raquel Martínez-Recio

и другие.

Viruses, Год журнала: 2024, Номер 16(12), С. 1885 - 1885

Опубликована: Дек. 5, 2024

Viromics studies are allowing us to understand not only the enormous diversity of virosphere, but also potential threat posed by emerging viruses. Regarding latter, main concern lies in monitoring presence RNA viruses, zoonotic some DNA on which we have focused present study, should be highlighted. For this purpose, analyzed 160 fecal samples from 14 species small terrestrial mammals, 9 them belonging order Rodentia. This allowed identify a total 25 complete or near-complete genomes families Papillomaviridae, Polyomaviridae, Adenoviridae, Circoviridae, and Genomoviridae, 18 could considered new types. Our results provide significant increase number viruses European origin with databases, at under-represented compared In addition, characterization whole is relevance for further study evolutionary forces governing virus adaptation, such as recombination, may play an important role cross-species transmission.

Язык: Английский

Процитировано

0